netcdf-c/libsrc/httpio.c
Dennis Heimbigner f6e25b695e Fix additional S3 support issues
re: https://github.com/Unidata/netcdf-c/issues/2117
re: https://github.com/Unidata/netcdf-c/issues/2119

* Modify libsrc to allow byte-range reading of netcdf-3 files in private S3 buckets; this required using the aws sdk. Also add a test case.
* The aws sdk can sometimes cause problems if the Awd::ShutdownAPI function is not called. So at optional atexit() support to ensure it is called. This is disabled for Windows.
* Add documentation to nczarr.md on how to build and use the aws sdk under windows. Currently it builds, but testing fails.
* Switch testing from stratus to the Unidata bucket on S3.
* Improve support for the s3: url protocol.
* Add a s3 specific utility code file: ds3util.c
* Modify NC_infermodel to attempt to read the magic number of byte-ranged files in S3.

## Misc.

* Move and rename the core S3 SDK wrapper code (libnczarr/zs3sdk.cpp) to libdispatch since it now used in libsrc as well as libnczarr.
* Add calls to nc_finalize in the utilities in case atexit is disabled.
* Add header only json parser to the distribution rather than as a built source.
2021-10-29 20:06:37 -06:00

299 lines
7.7 KiB
C

/*********************************************************************
* Copyright 2018, UCAR/Unidata
* See netcdf/COPYRIGHT file for copying and redistribution conditions.
* ********************************************************************/
#if HAVE_CONFIG_H
#include <config.h>
#endif
#include <assert.h>
#include <stdlib.h>
#include <errno.h>
#include <string.h>
#ifdef HAVE_FCNTL_H
#include <fcntl.h>
#endif
#ifdef _MSC_VER /* Microsoft Compilers */
#include <io.h>
#endif
#ifdef HAVE_UNISTD_H
#include <unistd.h>
#endif
#include "nc3internal.h"
#include "nclist.h"
#include "ncbytes.h"
#undef DEBUG
#ifdef DEBUG
#include <stdio.h>
#endif
#include <curl/curl.h>
#include "ncio.h"
#include "fbits.h"
#include "rnd.h"
#include "ncbytes.h"
#include "nchttp.h"
#define DEFAULTPAGESIZE 16384
/* Private data */
typedef struct NCHTTP {
NC_HTTP_STATE* state;
long long size; /* of the object */
NCbytes* region;
} NCHTTP;
/* Forward */
static int httpio_rel(ncio *const nciop, off_t offset, int rflags);
static int httpio_get(ncio *const nciop, off_t offset, size_t extent, int rflags, void **const vpp);
static int httpio_move(ncio *const nciop, off_t to, off_t from, size_t nbytes, int rflags);
static int httpio_sync(ncio *const nciop);
static int httpio_filesize(ncio* nciop, off_t* filesizep);
static int httpio_pad_length(ncio* nciop, off_t length);
static int httpio_close(ncio* nciop, int);
static long pagesize = 0;
/* Create a new ncio struct to hold info about the file. */
static int
httpio_new(const char* path, int ioflags, ncio** nciopp, NCHTTP** hpp)
{
int status = NC_NOERR;
ncio* nciop = NULL;
NCHTTP* http = NULL;
if(pagesize == 0)
pagesize = DEFAULTPAGESIZE;
errno = 0;
nciop = (ncio* )calloc(1,sizeof(ncio));
if(nciop == NULL) {status = NC_ENOMEM; goto fail;}
nciop->ioflags = ioflags;
*((char**)&nciop->path) = strdup(path);
if(nciop->path == NULL) {status = NC_ENOMEM; goto fail;}
*((ncio_relfunc**)&nciop->rel) = httpio_rel;
*((ncio_getfunc**)&nciop->get) = httpio_get;
*((ncio_movefunc**)&nciop->move) = httpio_move;
*((ncio_syncfunc**)&nciop->sync) = httpio_sync;
*((ncio_filesizefunc**)&nciop->filesize) = httpio_filesize;
*((ncio_pad_lengthfunc**)&nciop->pad_length) = httpio_pad_length;
*((ncio_closefunc**)&nciop->close) = httpio_close;
http = (NCHTTP*)calloc(1,sizeof(NCHTTP));
if(http == NULL) {status = NC_ENOMEM; goto fail;}
*((void* *)&nciop->pvt) = http;
if(nciopp) *nciopp = nciop;
if(hpp) *hpp = http;
done:
return status;
fail:
if(http != NULL) {
if(http->region)
ncbytesfree(http->region);
free(http);
}
if(nciop != NULL) {
if(nciop->path != NULL) free((char*)nciop->path);
}
goto done;
}
/* Create a file, and the ncio struct to go with it. This function is
only called from nc__create_mp.
path - path of file to create.
ioflags - flags from nc_create
initialsz - From the netcdf man page: "The argument
Iinitialsize sets the initial size of the file at creation time."
igeto -
igetsz -
sizehintp - the size of a page of data for buffered reads and writes.
nciopp - pointer to a pointer that will get location of newly
created and inited ncio struct.
mempp - pointer to pointer to the initial memory read.
*/
int
httpio_create(const char* path, int ioflags,
size_t initialsz,
off_t igeto, size_t igetsz, size_t* sizehintp,
void* parameters,
ncio* *nciopp, void** const mempp)
{
return NC_EPERM;
}
/* This function opens the data file. It is only called from nc.c,
from nc__open_mp and nc_delete_mp.
path - path of data file.
ioflags - flags passed into nc_open.
igeto - looks like this function can do an initial page get, and
igeto is going to be the offset for that. But it appears to be
unused
igetsz - the size in bytes of initial page get (a.k.a. extent). Not
ever used in the library.
sizehintp - the size of a page of data for buffered reads and writes.
nciopp - pointer to pointer that will get address of newly created
and inited ncio struct.
mempp - pointer to pointer to the initial memory read.
*/
int
httpio_open(const char* path,
int ioflags,
/* ignored */ off_t igeto, size_t igetsz, size_t* sizehintp,
/* ignored */ void* parameters,
ncio* *nciopp,
/* ignored */ void** const mempp)
{
ncio* nciop;
int status;
NCHTTP* http = NULL;
size_t sizehint;
if(path == NULL ||* path == 0)
return EINVAL;
/* Create private data */
if((status = httpio_new(path, ioflags, &nciop, &http))) goto done;
/* Open the path and get curl handle and object size */
if((status = nc_http_init(&http->state))) goto done;
if((status = nc_http_size(http->state,path,&http->size))) goto done;
sizehint = pagesize;
/* sizehint must be multiple of 8 */
sizehint = (sizehint / 8) * 8;
if(sizehint < 8) sizehint = 8;
*sizehintp = sizehint;
*nciopp = nciop;
done:
if(status)
httpio_close(nciop,0);
return status;
}
/*
* Get file size in bytes.
*/
static int
httpio_filesize(ncio* nciop, off_t* filesizep)
{
NCHTTP* http;
if(nciop == NULL || nciop->pvt == NULL) return NC_EINVAL;
http = (NCHTTP*)nciop->pvt;
if(filesizep != NULL) *filesizep = http->size;
return NC_NOERR;
}
/*
* Sync any changes to disk, then truncate or extend file so its size
* is length. This is only intended to be called before close, if the
* file is open for writing and the actual size does not match the
* calculated size, perhaps as the result of having been previously
* written in NOFILL mode.
*/
static int
httpio_pad_length(ncio* nciop, off_t length)
{
return NC_NOERR; /* do nothing */
}
/* Write out any dirty buffers to disk and
ensure that next read will get data from disk.
Sync any changes, then close the open file associated with the ncio
struct, and free its memory.
nciop - pointer to ncio to close.
doUnlink - if true, unlink file
*/
static int
httpio_close(ncio* nciop, int doUnlink)
{
int status = NC_NOERR;
NCHTTP* http;
if(nciop == NULL || nciop->pvt == NULL) return NC_NOERR;
http = (NCHTTP*)nciop->pvt;
assert(http != NULL);
status = nc_http_close(http->state);
/* do cleanup */
if(http != NULL) {
ncbytesfree(http->region);
free(http);
}
if(nciop->path != NULL) free((char*)nciop->path);
free(nciop);
return status;
}
/*
* Request that the region (offset, extent)
* be made available through *vpp.
*/
static int
httpio_get(ncio* const nciop, off_t offset, size_t extent, int rflags, void** const vpp)
{
int status = NC_NOERR;
NCHTTP* http;
if(nciop == NULL || nciop->pvt == NULL) {status = NC_EINVAL; goto done;}
http = (NCHTTP*)nciop->pvt;
assert(http->region == NULL);
http->region = ncbytesnew();
ncbytessetalloc(http->region,(unsigned long)extent);
if((status = nc_http_read(http->state,nciop->path,offset,extent,http->region)))
goto done;
assert(ncbyteslength(http->region) == extent);
if(vpp) *vpp = ncbytescontents(http->region);
done:
return status;
}
/*
* Like memmove(), safely move possibly overlapping data.
*/
static int
httpio_move(ncio* const nciop, off_t to, off_t from, size_t nbytes, int ignored)
{
return NC_EPERM;
}
static int
httpio_rel(ncio* const nciop, off_t offset, int rflags)
{
int status = NC_NOERR;
NCHTTP* http;
if(nciop == NULL || nciop->pvt == NULL) {status = NC_EINVAL; goto done;}
http = (NCHTTP*)nciop->pvt;
ncbytesfree(http->region);
http->region = NULL;
done:
return status;
}
/*
* Write out any dirty buffers to disk and
* ensure that next read will get data from disk.
*/
static int
httpio_sync(ncio* const nciop)
{
return NC_NOERR; /* do nothing */
}