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dfc2ac7296
In all these cases the size of the buffer can be computed with sizeof.
1389 lines
44 KiB
C
1389 lines
44 KiB
C
/* This is part of the netCDF package.
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Copyright 2021 University Corporation for Atmospheric Research/Unidata
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See COPYRIGHT file for conditions of use.
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Test quantization of netcdf-4 variables. Quantization is the
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zeroing-out of bits in float or double data beyond a desired
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precision.
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Ed Hartnett, 8/19/21
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Dennis Heimbigner, 1/16/22
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*/
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#include <math.h> /* Define fabs(), powf(), round() */
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#include <nc_tests.h>
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#include "err_macros.h"
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#include "netcdf.h"
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#define TEST "tst_quantize"
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#define FILE_NAME "tst_quantize.nc"
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#define NDIM1 1
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#define DIM_NAME_1 "meters_along_canal"
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#define DIM_LEN_3 3
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#define DIM_LEN_1 1
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#define DIM_LEN_5 5
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#define DIM_LEN_8 8
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#define VAR_NAME_1 "Amsterdam_houseboat_location"
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#define VAR_NAME_2 "Amsterdam_street_noise_decibels"
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#define NSD_3 3
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#define NSD_9 9
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/* This var used to help print a float in hex. */
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char pf_str[20];
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/* This struct allows us to treat float as uint32_t
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* types. */
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union FU {
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float f;
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uint32_t u;
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};
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/* This struct allows us to treat double points as uint64_t
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* types. */
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union DU {
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double d;
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uint64_t u;
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};
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/* This function prints a float as hex. */
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char *
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pf(float myf)
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{
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union {
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float f;
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uint32_t u;
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} fu;
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fu.f = myf;
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snprintf(pf_str, sizeof(pf_str), "0x%x", fu.u);
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return pf_str;
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}
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/* This function prints a double as hex. */
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char *
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pd(double myd)
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{
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union {
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double d;
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uint64_t u;
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} du;
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du.d = myd;
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snprintf(pf_str, sizeof(pf_str), "0x%llx", (unsigned long long)du.u);
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return pf_str;
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}
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int
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main(int argc, char **argv)
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{
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#ifdef TESTNCZARR
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const char* template = NULL;
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char file_url[4096];
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if(argc == 1)
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{fprintf(stderr,"usage: test_quantize <zarr-url-template>\n"); exit(1);}
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template = argv[1];
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snprintf(file_url,sizeof(file_url),template,FILE_NAME);
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#undef FILE_NAME
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#define FILE_NAME file_url
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#endif
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#define NUM_MODE_TESTS 2
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#define NUM_QUANTIZE_MODES 3
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int mode = NC_NETCDF4|NC_CLOBBER;
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int m;
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int q, quantize_mode[NUM_QUANTIZE_MODES] = {NC_QUANTIZE_BITGROOM, NC_QUANTIZE_GRANULARBR,
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NC_QUANTIZE_BITROUND};
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printf("\n*** Testing netcdf-4 variable quantization functions.\n");
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for (m = 0; m < NUM_MODE_TESTS; m++)
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{
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if (!m)
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printf("**** testing with NC_NETCDF4...\n");
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else
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{
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printf("**** testing with NC_NETCDF4|NC_CLASSIC_MODEL...\n");
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mode |= NC_CLASSIC_MODEL;
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}
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printf("\t**** testing quantization setting and error conditions...\n");
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{
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int ncid, dimid, varid1, varid2;
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int quantize_mode_in, nsd_in;
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for (q = 0; q < NUM_QUANTIZE_MODES; q++)
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{
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printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
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#ifndef TESTNCZARR
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/* Create a netcdf classic file with one var. Attempt
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* quantization. It will not work. */
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if (nc_create(FILE_NAME, NC_CLOBBER, &ncid)) ERR;
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if (nc_def_dim(ncid, DIM_NAME_1, DIM_LEN_3, &dimid)) ERR;
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if (nc_def_var(ncid, VAR_NAME_1, NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
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if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3) != NC_ENOTNC4) ERR;
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if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in) != NC_ENOTNC4) ERR;
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if (nc_close(ncid)) ERR;
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#endif
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/* Create a netcdf-4 file with two vars. Attempt
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* quantization. It will work, eventually... */
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if (nc_create(FILE_NAME, mode, &ncid)) ERR;
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if (nc_def_dim(ncid, DIM_NAME_1, DIM_LEN_3, &dimid)) ERR;
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if (nc_def_var(ncid, VAR_NAME_1, NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
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if (nc_def_var(ncid, VAR_NAME_2, NC_DOUBLE, NDIM1, &dimid, &varid2)) ERR;
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/* Bad varid. */
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if (nc_def_var_quantize(ncid, NC_GLOBAL, quantize_mode[q], NSD_3) != NC_EGLOBAL) ERR;
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if (nc_def_var_quantize(ncid, varid2 + 1, quantize_mode[q], NSD_3) != NC_ENOTVAR) ERR;
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/* Invalid values. */
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if (nc_def_var_quantize(ncid, varid1, NUM_QUANTIZE_MODES + 1, NSD_3) != NC_EINVAL) ERR;
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if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], -1) != NC_EINVAL) ERR;
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if (quantize_mode[q] == NC_QUANTIZE_BITROUND)
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{
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if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NC_QUANTIZE_MAX_FLOAT_NSB + 1) != NC_EINVAL) ERR;
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}
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else
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{
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if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NC_QUANTIZE_MAX_FLOAT_NSD + 1) != NC_EINVAL) ERR;
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}
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if (nc_def_var_quantize(ncid, varid2, NUM_QUANTIZE_MODES + 1, 3) != NC_EINVAL) ERR;
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if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], -1) != NC_EINVAL) ERR;
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if (quantize_mode[q] == NC_QUANTIZE_BITROUND)
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{
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if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NC_QUANTIZE_MAX_DOUBLE_NSB + 1) != NC_EINVAL) ERR;
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}
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else
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{
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if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NC_QUANTIZE_MAX_DOUBLE_NSD + 1) != NC_EINVAL) ERR;
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}
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if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], 0) != NC_EINVAL) ERR;
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/* This will work. */
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if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
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if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
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if (quantize_mode_in != quantize_mode[q]) ERR;
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if (nsd_in != NSD_3) ERR;
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/* Wait, I changed my mind! Let's turn off quantization. */
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if (nc_def_var_quantize(ncid, varid1, NC_NOQUANTIZE, 0)) ERR;
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if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
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if (quantize_mode_in != NC_NOQUANTIZE) ERR;
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if (nsd_in != 0) ERR;
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/* Changed my mind again, turn it on. */
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if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
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/* I changed my mind again! Turn it off! */
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if (nc_def_var_quantize(ncid, varid1, NC_NOQUANTIZE, 0)) ERR;
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if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
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if (quantize_mode_in != NC_NOQUANTIZE) ERR;
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if (nsd_in != 0) ERR;
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/* Changed my mind again, turn it on. */
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if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
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/* This also will work for double. */
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if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NSD_9)) ERR;
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if (nc_inq_var_quantize(ncid, varid2, &quantize_mode_in, &nsd_in)) ERR;
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if (quantize_mode_in != quantize_mode[q]) ERR;
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if (nsd_in != NSD_9) ERR;
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/* End define mode. */
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if (nc_enddef(ncid)) ERR;
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/* This will not work, it's too late! */
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if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3) != NC_ELATEDEF) ERR;
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/* Close the file. */
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if (nc_close(ncid)) ERR;
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/* Open the file and check. */
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if (nc_open(FILE_NAME, NC_WRITE, &ncid)) ERR;
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/* Don't assume the varid !!! */
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if (nc_inq_varid(ncid, VAR_NAME_1, &varid1)) ERR;
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if (nc_inq_varid(ncid, VAR_NAME_2, &varid2)) ERR;
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if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
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if (quantize_mode_in != quantize_mode[q]) ERR;
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if (nsd_in != NSD_3) ERR;
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if (nc_inq_var_quantize(ncid, varid2, &quantize_mode_in, &nsd_in)) ERR;
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if (quantize_mode_in != quantize_mode[q]) ERR;
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if (nsd_in != NSD_9) ERR;
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if (nc_close(ncid)) ERR;
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}
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}
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SUMMARIZE_ERR;
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#define NX_BIG 100
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#define NY_BIG 100
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#define NTYPES 9
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#define VAR_NAME "Amsterdam_coffeeshop_location"
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#define X_NAME "distance_from_center"
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#define Y_NAME "distance_along_canal"
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#define NDIM2 2
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printf("\t**** testing quantization handling of non-floats...\n");
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{
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for (q = 0; q < NUM_QUANTIZE_MODES; q++)
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{
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int ncid;
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int dimid[NDIM2];
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int varid;
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int nsd_in, quantize_mode_in;
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int nsd_out = 3;
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char file_name[NC_MAX_FILENAME + 1];
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int xtype[NTYPES] = {NC_CHAR, NC_SHORT, NC_INT, NC_BYTE, NC_UBYTE,
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NC_USHORT, NC_UINT, NC_INT64, NC_UINT64};
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int t;
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printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
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for (t = 0; t < NTYPES; t++)
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{
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snprintf(file_name, sizeof(file_name), "%s_quantize_%d_type_%d.nc", TEST, quantize_mode[q], xtype[t]);
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#ifdef TESTNCZARR
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{
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char url[NC_MAX_FILENAME + 1];
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snprintf(url,sizeof(url),template,file_name);
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strcpy(file_name,url);
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}
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#endif
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/* Create file. */
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if (nc_create(file_name, NC_NETCDF4, &ncid)) ERR;
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if (nc_def_dim(ncid, X_NAME, NX_BIG, &dimid[0])) ERR;
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if (nc_def_dim(ncid, Y_NAME, NY_BIG, &dimid[1])) ERR;
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if (nc_def_var(ncid, VAR_NAME, xtype[t], NDIM2, dimid, &varid)) ERR;
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/* Quantzie returns NC_EINVAL because this is not
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* an NC_FLOAT or NC_DOULBE. */
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if (nc_def_var_quantize(ncid, varid, quantize_mode[q], nsd_out) != NC_EINVAL) ERR;
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if (nc_close(ncid)) ERR;
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/* Check file. */
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{
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if (nc_open(file_name, NC_NETCDF4, &ncid)) ERR;
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if (nc_inq_varid(ncid,VAR_NAME,&varid)) ERR;
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if (nc_inq_var_quantize(ncid, varid, &quantize_mode_in, &nsd_in))
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ERR;
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if (quantize_mode_in) ERR;
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if (nc_close(ncid)) ERR;
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}
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}
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}
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}
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SUMMARIZE_ERR;
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printf("\t**** testing quantization of scalars...\n");
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{
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for (q = 0; q < NUM_QUANTIZE_MODES; q++)
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{
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int ncid, varid1, varid2;
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int quantize_mode_in, nsd_in;
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float float_data[DIM_LEN_1] = {1.1111111f};
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double double_data[DIM_LEN_1] = {1.111111111111};
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printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
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/* Create a netcdf-4 file with two scalar vars. */
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if (nc_create(FILE_NAME, mode, &ncid)) ERR;
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if (nc_def_var(ncid, VAR_NAME_1, NC_FLOAT, 0, NULL, &varid1)) ERR;
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if (nc_def_var(ncid, VAR_NAME_2, NC_DOUBLE, 0, NULL, &varid2)) ERR;
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/* Turn on quantize for both vars. */
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if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
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if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NSD_3)) ERR;
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/* For classic mode, we must call enddef. */
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if (m)
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if (nc_enddef(ncid)) ERR;
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/* Write some data. */
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if (nc_put_var_float(ncid, varid1, float_data)) ERR;
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if (nc_put_var_double(ncid, varid2, double_data)) ERR;
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/* Close the file. */
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if (nc_close(ncid)) ERR;
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{
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float float_in;
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double double_in;
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union FU fin;
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int nsd_att_in;
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union DU dfin;
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union FU fout;
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union DU dfout;
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NC_UNUSED(fout); NC_UNUSED(dfout);
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/* Open the file and check metadata. */
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if (nc_open(FILE_NAME, NC_WRITE, &ncid)) ERR;
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if (nc_inq_varid(ncid, VAR_NAME_1, &varid1)) ERR;
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if (nc_inq_varid(ncid, VAR_NAME_2, &varid2)) ERR;
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if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
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if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
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if (nc_inq_var_quantize(ncid, varid2, &quantize_mode_in, &nsd_in)) ERR;
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if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
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/* Each var now has an attribute describing the quantize settings. */
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switch (quantize_mode[q])
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{
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case NC_QUANTIZE_BITGROOM:
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if (nc_get_att_int(ncid, 0, NC_QUANTIZE_BITGROOM_ATT_NAME, &nsd_att_in)) ERR;
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if (nsd_att_in != NSD_3) ERR;
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if (nc_get_att_int(ncid, 1, NC_QUANTIZE_BITGROOM_ATT_NAME, &nsd_att_in)) ERR;
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if (nsd_att_in != NSD_3) ERR;
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break;
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case NC_QUANTIZE_GRANULARBR:
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if (nc_get_att_int(ncid, 0, NC_QUANTIZE_GRANULARBR_ATT_NAME, &nsd_att_in)) ERR;
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if (nsd_att_in != NSD_3) ERR;
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if (nc_get_att_int(ncid, 1, NC_QUANTIZE_GRANULARBR_ATT_NAME, &nsd_att_in)) ERR;
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if (nsd_att_in != NSD_3) ERR;
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break;
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case NC_QUANTIZE_BITROUND:
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if (nc_get_att_int(ncid, 0, NC_QUANTIZE_BITROUND_ATT_NAME, &nsd_att_in)) ERR;
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if (nsd_att_in != NSD_3) ERR;
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if (nc_get_att_int(ncid, 1, NC_QUANTIZE_BITROUND_ATT_NAME, &nsd_att_in)) ERR;
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if (nsd_att_in != NSD_3) ERR;
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break;
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default:
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ERR;
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}
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/* Check the data. */
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if (nc_get_var(ncid, varid1, &float_in)) ERR;
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if (nc_get_var(ncid, varid2, &double_in)) ERR;
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#if 0
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fout.f = float_data[0];
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dfout.d = double_data[0];
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#endif
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fin.f = float_in;
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dfin.d = double_in;
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#if 0
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printf ("\nfloat_data: %10f : 0x%x float_data_in: %10f : 0x%x\n",
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float_data[0], fout.u, float_data[0], fin.u);
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printf ("\ndouble_data: %15g : 0x%16lx double_data_in: %15g : 0x%lx\n",
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double_data[0], dfout.u, double_data[0], dfin.u);
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#endif
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/* Check the results, slightly different for each quantize algorithm. */
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switch (quantize_mode[q])
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{
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case NC_QUANTIZE_BITGROOM:
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if (fin.u != 0x3f8e3000) ERR;
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if (dfin.u != 0x3ff1c60000000000) ERR;
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break;
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case NC_QUANTIZE_GRANULARBR:
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if (fin.u != 0x3f8e0000) ERR;
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if (dfin.u != 0x3ff1c00000000000) ERR;
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break;
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case NC_QUANTIZE_BITROUND:
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if (fin.u != 0x3f900000) ERR;
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if (dfin.u != 0x3ff2000000000000) ERR;
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break;
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default:
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ERR;
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}
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/* Close the file again. */
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if (nc_close(ncid)) ERR;
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}
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}
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}
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SUMMARIZE_ERR;
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printf("\t**** testing quantization of one value...\n");
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{
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for (q = 0; q < NUM_QUANTIZE_MODES; q++)
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{
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int ncid, dimid, varid1, varid2;
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int quantize_mode_in, nsd_in;
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float float_data[DIM_LEN_1] = {1.1111111f};
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double double_data[DIM_LEN_1] = {1.111111111111};
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printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
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/* Create a netcdf-4 file with two vars. */
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if (nc_create(FILE_NAME, mode, &ncid)) ERR;
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if (nc_def_dim(ncid, DIM_NAME_1, DIM_LEN_1, &dimid)) ERR;
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if (nc_def_var(ncid, VAR_NAME_1, NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
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if (nc_def_var(ncid, VAR_NAME_2, NC_DOUBLE, NDIM1, &dimid, &varid2)) ERR;
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|
|
/* Turn on quantize for both vars. */
|
|
if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
|
|
if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NSD_3)) ERR;
|
|
|
|
/* For classic mode, we must call enddef. */
|
|
if (m)
|
|
if (nc_enddef(ncid)) ERR;
|
|
|
|
/* Write some data. */
|
|
if (nc_put_var_float(ncid, varid1, float_data)) ERR;
|
|
if (nc_put_var_double(ncid, varid2, double_data)) ERR;
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
|
|
{
|
|
float float_in;
|
|
double double_in;
|
|
union FU fin;
|
|
union DU dfin;
|
|
union FU fout;
|
|
union DU dfout;
|
|
|
|
NC_UNUSED(fout); NC_UNUSED(dfout);
|
|
|
|
/* Open the file and check metadata. */
|
|
if (nc_open(FILE_NAME, NC_WRITE, &ncid)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_1,&varid1)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_2,&varid2)) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid2, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
|
|
/* Check the data. */
|
|
if (nc_get_var(ncid, varid1, &float_in)) ERR;
|
|
if (nc_get_var(ncid, varid2, &double_in)) ERR;
|
|
#if 0
|
|
fout.f = float_data[0];
|
|
dfout.d = double_data[0];
|
|
#endif
|
|
fin.f = float_in;
|
|
dfin.d = double_in;
|
|
#if 0
|
|
printf ("\nfloat_data: %10f : 0x%x float_data_in: %10f : 0x%x\n",
|
|
float_data[0], fout.u, float_data[0], fin.u);
|
|
printf ("\ndouble_data: %15g : 0x%16lx double_data_in: %15g : 0x%lx\n",
|
|
double_data[0], dfout.u, double_data[0], dfin.u);
|
|
#endif
|
|
/* Check the results, slightly different for each quantize algorithm. */
|
|
switch (quantize_mode[q])
|
|
{
|
|
case NC_QUANTIZE_BITGROOM:
|
|
if (fin.u != 0x3f8e3000) ERR;
|
|
if (dfin.u != 0x3ff1c60000000000) ERR;
|
|
break;
|
|
case NC_QUANTIZE_GRANULARBR:
|
|
if (fin.u != 0x3f8e0000) ERR;
|
|
if (dfin.u != 0x3ff1c00000000000) ERR;
|
|
break;
|
|
case NC_QUANTIZE_BITROUND:
|
|
if (fin.u != 0x3f900000) ERR;
|
|
if (dfin.u != 0x3ff2000000000000) ERR;
|
|
break;
|
|
default:
|
|
ERR;
|
|
}
|
|
|
|
/* Close the file again. */
|
|
if (nc_close(ncid)) ERR;
|
|
}
|
|
}
|
|
}
|
|
SUMMARIZE_ERR;
|
|
printf("\t**** testing more quantization values...\n");
|
|
{
|
|
for (q = 0; q < NUM_QUANTIZE_MODES; q++)
|
|
{
|
|
int ncid, dimid, varid1, varid2;
|
|
int quantize_mode_in, nsd_in;
|
|
float float_data[DIM_LEN_5] = {1.11111111f, 1.0f, 9.99999999f, 12345.67f, .1234567f};
|
|
double double_data[DIM_LEN_5] = {1.1111111, 1.0, 9.999999999, 1234567890.12345, 123456789012345.0};
|
|
int x;
|
|
|
|
printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
|
|
|
|
/* Create a netcdf-4 file with two vars. */
|
|
if (nc_create(FILE_NAME, mode, &ncid)) ERR;
|
|
if (nc_def_dim(ncid, DIM_NAME_1, DIM_LEN_5, &dimid)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_1, NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_2, NC_DOUBLE, NDIM1, &dimid, &varid2)) ERR;
|
|
|
|
/* Turn on quantize for both vars. */
|
|
if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
|
|
if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NSD_3)) ERR;
|
|
|
|
/* For classic mode, we must call enddef. */
|
|
if (m)
|
|
if (nc_enddef(ncid)) ERR;
|
|
|
|
/* Write some data. */
|
|
if (nc_put_var_float(ncid, varid1, float_data)) ERR;
|
|
if (nc_put_var_double(ncid, varid2, double_data)) ERR;
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
|
|
{
|
|
float float_in[DIM_LEN_5];
|
|
double double_in[DIM_LEN_5];
|
|
union FU {
|
|
float f;
|
|
uint32_t u;
|
|
};
|
|
|
|
union FU fin;
|
|
union FU xpect[NUM_QUANTIZE_MODES][DIM_LEN_5];
|
|
union DU dfin;
|
|
union FU fout;
|
|
union DU dfout;
|
|
union DU double_xpect[NUM_QUANTIZE_MODES][DIM_LEN_5];
|
|
|
|
NC_UNUSED(fout); NC_UNUSED(dfout);
|
|
|
|
switch (quantize_mode[q])
|
|
{
|
|
case NC_QUANTIZE_BITGROOM:
|
|
xpect[0][0].u = 0x3f8e3000;
|
|
xpect[0][1].u = 0x3f800fff;
|
|
xpect[0][2].u = 0x41200000;
|
|
xpect[0][3].u = 0x4640efff;
|
|
xpect[0][4].u = 0x3dfcd000;
|
|
double_xpect[0][0].u = 0x3ff1c60000000000;
|
|
double_xpect[0][1].u = 0x3ff001ffffffffff;
|
|
double_xpect[0][2].u = 0x4023fe0000000000;
|
|
double_xpect[0][3].u = 0x41d265ffffffffff;
|
|
double_xpect[0][4].u = 0x42dc120000000000;
|
|
break;
|
|
case NC_QUANTIZE_GRANULARBR:
|
|
xpect[1][0].u = 0x3f8e0000;
|
|
xpect[1][1].u = 0x3f800000;
|
|
xpect[1][2].u = 0x41200000;
|
|
xpect[1][3].u = 0x46410000;
|
|
xpect[1][4].u = 0x3dfc0000;
|
|
double_xpect[1][0].u = 0x3ff1c00000000000;
|
|
double_xpect[1][1].u = 0x3ff0000000000000;
|
|
double_xpect[1][2].u = 0x4024000000000000;
|
|
double_xpect[1][3].u = 0x41d2600000000000;
|
|
double_xpect[1][4].u = 0x42dc200000000000;
|
|
break;
|
|
case NC_QUANTIZE_BITROUND:
|
|
xpect[2][0].u = 0x3f900000;
|
|
xpect[2][1].u = 0x3f800000;
|
|
xpect[2][2].u = 0x41200000;
|
|
xpect[2][3].u = 0x46400000;
|
|
xpect[2][4].u = 0x3e000000;
|
|
double_xpect[2][0].u = 0x3ff2000000000000;
|
|
double_xpect[2][1].u = 0x3ff0000000000000;
|
|
double_xpect[2][2].u = 0x4024000000000000;
|
|
double_xpect[2][3].u = 0x41d2000000000000;
|
|
double_xpect[2][4].u = 0x42dc000000000000;
|
|
break;
|
|
default:
|
|
ERR;
|
|
}
|
|
|
|
/* Open the file and check metadata. */
|
|
if (nc_open(FILE_NAME, NC_WRITE, &ncid)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_1,&varid1)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_2,&varid2)) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid2, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
|
|
/* Check the data. */
|
|
if (nc_get_var(ncid, varid1, float_in)) ERR;
|
|
if (nc_get_var(ncid, varid2, double_in)) ERR;
|
|
#if 0
|
|
printf("\n");
|
|
#endif
|
|
for (x = 0; x < DIM_LEN_5; x++)
|
|
{
|
|
fin.f = float_in[x];
|
|
#if 0
|
|
fout.f = float_data[x];
|
|
printf ("float_data: %10f : 0x%x float_data_in: %10f : 0x%x\n",
|
|
float_data[x], fout.u, float_data[x], fin.u);
|
|
#endif
|
|
if (fin.u != xpect[q][x].u) ERR;
|
|
dfin.d = double_in[x];
|
|
#if 0
|
|
dfout.d = double_data[x];
|
|
printf("double_data: %15g : 0x%16lx double_data_in: %15g : 0x%16lx\n",
|
|
double_data[x], dfout.u, double_data[x], dfin.u);
|
|
#endif
|
|
if (dfin.u != double_xpect[q][x].u) ERR;
|
|
}
|
|
|
|
/* Close the file again. */
|
|
if (nc_close(ncid)) ERR;
|
|
}
|
|
}
|
|
}
|
|
SUMMARIZE_ERR;
|
|
printf("\t**** testing quantization of one value with type conversion...\n");
|
|
{
|
|
for (q = 0; q < NUM_QUANTIZE_MODES; q++)
|
|
{
|
|
int ncid, dimid, varid1, varid2;
|
|
int quantize_mode_in, nsd_in;
|
|
float float_data[DIM_LEN_1] = {1.1111111f};
|
|
double double_data[DIM_LEN_1] = {1.111111111111};
|
|
|
|
printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
|
|
|
|
/* Create a netcdf-4 file with two vars. */
|
|
if (nc_create(FILE_NAME, mode, &ncid)) ERR;
|
|
if (nc_def_dim(ncid, DIM_NAME_1, DIM_LEN_1, &dimid)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_1, NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_2, NC_DOUBLE, NDIM1, &dimid, &varid2)) ERR;
|
|
|
|
/* Turn on quantize for both vars. */
|
|
if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
|
|
if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NSD_3)) ERR;
|
|
|
|
/* For classic mode, we must call enddef. */
|
|
if (m)
|
|
if (nc_enddef(ncid)) ERR;
|
|
|
|
/* Write some double data to float var. */
|
|
if (nc_put_var_double(ncid, varid1, double_data)) ERR;
|
|
|
|
/* Write some float data to double var. */
|
|
if (nc_put_var_float(ncid, varid2, float_data)) ERR;
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
|
|
{
|
|
float float_in;
|
|
double double_in;
|
|
union FU fin;
|
|
union DU dfin;
|
|
union FU fout;
|
|
union DU dfout;
|
|
int nsd_att_in;
|
|
|
|
NC_UNUSED(fout); NC_UNUSED(dfout);
|
|
|
|
/* Open the file and check metadata. */
|
|
if (nc_open(FILE_NAME, NC_WRITE, &ncid)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_1,&varid1)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_2,&varid2)) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid2, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
|
|
/* Each var now has an attribute describing the quantize settings. */
|
|
switch (quantize_mode[q])
|
|
{
|
|
case NC_QUANTIZE_BITGROOM:
|
|
if (nc_get_att_int(ncid, 0, NC_QUANTIZE_BITGROOM_ATT_NAME, &nsd_att_in)) ERR;
|
|
if (nsd_att_in != NSD_3) ERR;
|
|
if (nc_get_att_int(ncid, 1, NC_QUANTIZE_BITGROOM_ATT_NAME, &nsd_att_in)) ERR;
|
|
if (nsd_att_in != NSD_3) ERR;
|
|
break;
|
|
case NC_QUANTIZE_GRANULARBR:
|
|
if (nc_get_att_int(ncid, 0, NC_QUANTIZE_GRANULARBR_ATT_NAME, &nsd_att_in)) ERR;
|
|
if (nsd_att_in != NSD_3) ERR;
|
|
if (nc_get_att_int(ncid, 1, NC_QUANTIZE_GRANULARBR_ATT_NAME, &nsd_att_in)) ERR;
|
|
if (nsd_att_in != NSD_3) ERR;
|
|
break;
|
|
case NC_QUANTIZE_BITROUND:
|
|
if (nc_get_att_int(ncid, 0, NC_QUANTIZE_BITROUND_ATT_NAME, &nsd_att_in)) ERR;
|
|
if (nsd_att_in != NSD_3) ERR;
|
|
if (nc_get_att_int(ncid, 1, NC_QUANTIZE_BITROUND_ATT_NAME, &nsd_att_in)) ERR;
|
|
if (nsd_att_in != NSD_3) ERR;
|
|
break;
|
|
default:
|
|
ERR;
|
|
}
|
|
|
|
/* Check the data. */
|
|
if (nc_get_var(ncid, varid1, &float_in)) ERR;
|
|
if (nc_get_var(ncid, varid2, &double_in)) ERR;
|
|
fin.f = float_in;
|
|
dfin.d = double_in;
|
|
#if 0
|
|
fout.f = (float)double_data[0];
|
|
dfout.d = float_data[0];
|
|
printf ("\ndouble_data: %15g : 0x%x float_data_in: %10f : 0x%x\n",
|
|
double_data[0], fout.u, float_in, fin.u);
|
|
printf ("\nfloat_data: %15g : 0x%16lx double_data_in: %15g : 0x%lx\n",
|
|
float_data[0], dfout.u, double_in, dfin.u);
|
|
|
|
#endif
|
|
switch (quantize_mode[q])
|
|
{
|
|
case NC_QUANTIZE_BITGROOM:
|
|
if (fin.u != 0x3f8e3000) ERR;
|
|
if (dfin.u != 0x3ff1c60000000000) ERR;
|
|
break;
|
|
case NC_QUANTIZE_GRANULARBR:
|
|
if (fin.u != 0x3f8e0000) ERR;
|
|
if (dfin.u != 0x3ff1c00000000000) ERR;
|
|
break;
|
|
case NC_QUANTIZE_BITROUND:
|
|
if (fin.u !=0x3f900000 ) ERR;
|
|
if (dfin.u != 0x3ff2000000000000) ERR;
|
|
break;
|
|
default:
|
|
ERR;
|
|
}
|
|
|
|
/* Close the file again. */
|
|
if (nc_close(ncid)) ERR;
|
|
}
|
|
}
|
|
}
|
|
SUMMARIZE_ERR;
|
|
printf("\t**** testing more quantization values with type conversion...\n");
|
|
{
|
|
for (q = 0; q < NUM_QUANTIZE_MODES; q++)
|
|
{
|
|
int ncid, dimid, varid1, varid2;
|
|
int quantize_mode_in, nsd_in;
|
|
float float_data[DIM_LEN_5] = {1.11111111f, 1.0, 9.99999999f, 12345.67f, .1234567f};
|
|
double double_data[DIM_LEN_5] = {1.1111111, 1.0, 9.999999999, 1234567890.12345, 123456789012345.0};
|
|
int x;
|
|
|
|
printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
|
|
|
|
/* Create a netcdf-4 file with two vars. */
|
|
if (nc_create(FILE_NAME, mode, &ncid)) ERR;
|
|
if (nc_def_dim(ncid, DIM_NAME_1, DIM_LEN_5, &dimid)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_1, NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_2, NC_DOUBLE, NDIM1, &dimid, &varid2)) ERR;
|
|
|
|
/* Turn on quantize for both vars. */
|
|
if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
|
|
if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NSD_3)) ERR;
|
|
|
|
/* For classic mode, we must call enddef. */
|
|
if (m)
|
|
if (nc_enddef(ncid)) ERR;
|
|
|
|
/* Write some data. */
|
|
if (nc_put_var_double(ncid, varid1, double_data)) ERR;
|
|
if (nc_put_var_float(ncid, varid2, float_data)) ERR;
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
|
|
{
|
|
float float_in[DIM_LEN_5];
|
|
double double_in[DIM_LEN_5];
|
|
union FU {
|
|
float f;
|
|
uint32_t u;
|
|
};
|
|
|
|
union FU fin;
|
|
union FU xpect[NUM_QUANTIZE_MODES][DIM_LEN_5];
|
|
union DU dfin;
|
|
union FU fout;
|
|
union DU dfout;
|
|
union DU double_xpect[NUM_QUANTIZE_MODES][DIM_LEN_5];
|
|
|
|
NC_UNUSED(fout); NC_UNUSED(dfout);
|
|
|
|
switch (quantize_mode[q])
|
|
{
|
|
case NC_QUANTIZE_BITGROOM:
|
|
xpect[0][0].u = 0x3f8e3000;
|
|
xpect[0][1].u = 0x3f800fff;
|
|
xpect[0][2].u = 0x41200000;
|
|
xpect[0][3].u = 0x4e932fff;
|
|
xpect[0][4].u = 0x56e09000;
|
|
double_xpect[0][0].u = 0x3ff1c60000000000;
|
|
double_xpect[0][1].u = 0x3ff001ffffffffff;
|
|
double_xpect[0][2].u = 0x4024000000000000;
|
|
double_xpect[0][3].u = 0x40c81dffffffffff;
|
|
double_xpect[0][4].u = 0x3fbf9a0000000000;
|
|
break;
|
|
case NC_QUANTIZE_GRANULARBR:
|
|
xpect[1][0].u = 0x3f8e0000;
|
|
xpect[1][1].u =0x3f800000 ;
|
|
xpect[1][2].u = 0x41200000;
|
|
xpect[1][3].u = 0x4e930000;
|
|
xpect[1][4].u = 0x56e10000;
|
|
double_xpect[1][0].u = 0x3ff1c00000000000;
|
|
double_xpect[1][1].u = 0x3ff0000000000000;
|
|
double_xpect[1][2].u = 0x4024000000000000;
|
|
double_xpect[1][3].u = 0x40c8200000000000;
|
|
double_xpect[1][4].u = 0x3fbf800000000000;
|
|
break;
|
|
case NC_QUANTIZE_BITROUND:
|
|
xpect[2][0].u = 0x3f900000;
|
|
xpect[2][1].u = 0x3f800000;
|
|
xpect[2][2].u = 0x41200000;
|
|
xpect[2][3].u = 0x4e900000;
|
|
xpect[2][4].u = 0x56e00000;
|
|
double_xpect[2][0].u = 0x3ff2000000000000;
|
|
double_xpect[2][1].u = 0x3ff0000000000000;
|
|
double_xpect[2][2].u = 0x4024000000000000;
|
|
double_xpect[2][3].u = 0x40c8000000000000;
|
|
double_xpect[2][4].u = 0x3fc0000000000000;
|
|
break;
|
|
default:
|
|
ERR;
|
|
}
|
|
|
|
/* Open the file and check metadata. */
|
|
if (nc_open(FILE_NAME, NC_WRITE, &ncid)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_1,&varid1)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_2,&varid2)) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid2, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
|
|
/* Check the data. */
|
|
if (nc_get_var(ncid, varid1, float_in)) ERR;
|
|
if (nc_get_var(ncid, varid2, double_in)) ERR;
|
|
#if 0
|
|
printf("\n");
|
|
#endif
|
|
for (x = 0; x < DIM_LEN_5; x++)
|
|
{
|
|
fin.f = float_in[x];
|
|
dfin.d = double_in[x];
|
|
#if 0
|
|
fout.f = float_data[x];
|
|
printf ("float_data: %10f : 0x%x float_data_in: %10f : 0x%x\n",
|
|
float_data[x], fout.u, float_data[x], fin.u);
|
|
dfout.d = double_data[x];
|
|
printf("double_data: %15g : 0x%16lx double_data_in: %15g : 0x%16lx\n",
|
|
double_data[x], dfout.u, double_data[x], dfin.u);
|
|
#endif
|
|
if (fin.u != xpect[q][x].u) ERR;
|
|
if (dfin.u != double_xpect[q][x].u) ERR;
|
|
}
|
|
|
|
/* Close the file again. */
|
|
if (nc_close(ncid)) ERR;
|
|
}
|
|
}
|
|
}
|
|
SUMMARIZE_ERR;
|
|
printf("\t**** testing more quantization values with default fill values...\n");
|
|
{
|
|
for (q = 0; q < NUM_QUANTIZE_MODES; q++)
|
|
{
|
|
int ncid, dimid, varid1, varid2;
|
|
int quantize_mode_in, nsd_in;
|
|
float float_data[DIM_LEN_5] = {1.11111111f, NC_FILL_FLOAT, 9.99999999f, 12345.67f, NC_FILL_FLOAT};
|
|
double double_data[DIM_LEN_5] = {1.1111111, NC_FILL_DOUBLE, 9.999999999, 1234567890.12345, NC_FILL_DOUBLE};
|
|
int x;
|
|
|
|
printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
|
|
|
|
/* Create a netcdf-4 file with two vars. */
|
|
if (nc_create(FILE_NAME, mode, &ncid)) ERR;
|
|
if (nc_def_dim(ncid, DIM_NAME_1, DIM_LEN_5, &dimid)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_1, NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_2, NC_DOUBLE, NDIM1, &dimid, &varid2)) ERR;
|
|
|
|
/* Turn on quantize for both vars. */
|
|
if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
|
|
if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NSD_3)) ERR;
|
|
|
|
/* For classic mode, we must call enddef. */
|
|
if (m)
|
|
if (nc_enddef(ncid)) ERR;
|
|
|
|
/* Write some data. */
|
|
if (nc_put_var_float(ncid, varid1, float_data)) ERR;
|
|
if (nc_put_var_double(ncid, varid2, double_data)) ERR;
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
|
|
{
|
|
float float_in[DIM_LEN_5];
|
|
double double_in[DIM_LEN_5];
|
|
union FU {
|
|
float f;
|
|
uint32_t u;
|
|
};
|
|
|
|
union FU fin;
|
|
union FU xpect[NUM_QUANTIZE_MODES][DIM_LEN_5];
|
|
union DU dfin;
|
|
union FU fout;
|
|
union DU dfout;
|
|
union DU double_xpect[NUM_QUANTIZE_MODES][DIM_LEN_5];
|
|
|
|
NC_UNUSED(fout); NC_UNUSED(dfout);
|
|
|
|
switch (quantize_mode[q])
|
|
{
|
|
case NC_QUANTIZE_BITGROOM:
|
|
xpect[0][0].u = 0x3f8e3000;
|
|
xpect[0][1].u = 0x7cf00000;
|
|
xpect[0][2].u = 0x41200000;
|
|
xpect[0][3].u = 0x4640efff;
|
|
xpect[0][4].u = 0x7cf00000;
|
|
double_xpect[0][0].u = 0x3ff1c60000000000;
|
|
double_xpect[0][1].u = 0x479e000000000000;
|
|
double_xpect[0][2].u = 0x4023fe0000000000;
|
|
double_xpect[0][3].u = 0x41d265ffffffffff;
|
|
double_xpect[0][4].u = 0x479e000000000000;
|
|
break;
|
|
case NC_QUANTIZE_GRANULARBR:
|
|
xpect[1][0].u = 0x3f8e0000;
|
|
xpect[1][1].u = 0x7cf00000;
|
|
xpect[1][2].u = 0x41200000;
|
|
xpect[1][3].u = 0x46410000;
|
|
xpect[1][4].u = 0x7cf00000;
|
|
double_xpect[1][0].u = 0x3ff1c00000000000;
|
|
double_xpect[1][1].u = 0x479e000000000000;
|
|
double_xpect[1][2].u = 0x4024000000000000;
|
|
double_xpect[1][3].u = 0x41d2600000000000;
|
|
double_xpect[1][4].u = 0x479e000000000000;
|
|
break;
|
|
case NC_QUANTIZE_BITROUND:
|
|
xpect[2][0].u = 0x3f900000;
|
|
xpect[2][1].u = 0x7cf00000;
|
|
xpect[2][2].u = 0x41200000;
|
|
xpect[2][3].u = 0x46400000;
|
|
xpect[2][4].u = 0x7cf00000;
|
|
double_xpect[2][0].u = 0x3ff2000000000000;
|
|
double_xpect[2][1].u = 0x479e000000000000;
|
|
double_xpect[2][2].u = 0x4024000000000000;
|
|
double_xpect[2][3].u = 0x41d2000000000000;
|
|
double_xpect[2][4].u = 0x479e000000000000;
|
|
break;
|
|
default:
|
|
ERR;
|
|
}
|
|
|
|
/* Open the file and check metadata. */
|
|
if (nc_open(FILE_NAME, NC_WRITE, &ncid)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_1,&varid1)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_2,&varid2)) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid2, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
|
|
/* Check the data. */
|
|
if (nc_get_var(ncid, varid1, float_in)) ERR;
|
|
if (nc_get_var(ncid, varid2, double_in)) ERR;
|
|
#if 0
|
|
printf("\n");
|
|
#endif
|
|
for (x = 0; x < DIM_LEN_5; x++)
|
|
{
|
|
fin.f = float_in[x];
|
|
dfin.d = double_in[x];
|
|
#if 0
|
|
fout.f = float_data[x];
|
|
dfout.d = double_data[x];
|
|
printf ("float_data: %10f : 0x%x float_data_in: %10f : 0x%x\n",
|
|
float_data[x], fout.u, float_data[x], fin.u);
|
|
printf("double_data: %15g : 0x%16lx double_data_in: %15g : 0x%16lx\n",
|
|
double_data[x], dfout.u, double_data[x], dfin.u);
|
|
#endif
|
|
if (fin.u != xpect[q][x].u) ERR;
|
|
if (dfin.u != double_xpect[q][x].u) ERR;
|
|
}
|
|
|
|
/* Close the file again. */
|
|
if (nc_close(ncid)) ERR;
|
|
}
|
|
}
|
|
}
|
|
SUMMARIZE_ERR;
|
|
printf("\t**** testing more quantization values with custom fill values...\n");
|
|
{
|
|
#define CUSTOM_FILL_FLOAT 99.99999f
|
|
#define CUSTOM_FILL_DOUBLE -99999.99999
|
|
for (q = 0; q < NUM_QUANTIZE_MODES; q++)
|
|
{
|
|
int ncid, dimid, varid1, varid2;
|
|
int quantize_mode_in, nsd_in;
|
|
float float_data[DIM_LEN_5] = {1.11111111f, CUSTOM_FILL_FLOAT, 9.99999999f, 12345.67f, CUSTOM_FILL_FLOAT};
|
|
double double_data[DIM_LEN_5] = {1.1111111, CUSTOM_FILL_DOUBLE, 9.999999999, 1234567890.12345, CUSTOM_FILL_DOUBLE};
|
|
float custom_fill_float = CUSTOM_FILL_FLOAT;
|
|
double custom_fill_double = CUSTOM_FILL_DOUBLE;
|
|
int x;
|
|
|
|
printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
|
|
|
|
/* Create a netcdf-4 file with two vars. */
|
|
if (nc_create(FILE_NAME, mode, &ncid)) ERR;
|
|
if (nc_def_dim(ncid, DIM_NAME_1, DIM_LEN_5, &dimid)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_1, NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
|
|
if (nc_put_att_float(ncid, varid1, _FillValue, NC_FLOAT, 1, &custom_fill_float)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_2, NC_DOUBLE, NDIM1, &dimid, &varid2)) ERR;
|
|
if (nc_put_att_double(ncid, varid2, _FillValue, NC_DOUBLE, 1, &custom_fill_double)) ERR;
|
|
|
|
/* Turn on quantize for both vars. */
|
|
if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
|
|
if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NSD_3)) ERR;
|
|
|
|
/* For classic mode, we must call enddef. */
|
|
if (m)
|
|
if (nc_enddef(ncid)) ERR;
|
|
|
|
/* Write some data. */
|
|
if (nc_put_var_float(ncid, varid1, float_data)) ERR;
|
|
if (nc_put_var_double(ncid, varid2, double_data)) ERR;
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
|
|
{
|
|
float float_in[DIM_LEN_5];
|
|
double double_in[DIM_LEN_5];
|
|
union FU {
|
|
float f;
|
|
uint32_t u;
|
|
};
|
|
|
|
union FU fin;
|
|
union FU xpect[NUM_QUANTIZE_MODES][DIM_LEN_5];
|
|
union DU dfin;
|
|
union FU fout;
|
|
union DU dfout;
|
|
union DU double_xpect[NUM_QUANTIZE_MODES][DIM_LEN_5];
|
|
|
|
NC_UNUSED(fout); NC_UNUSED(dfout);
|
|
|
|
switch (quantize_mode[q])
|
|
{
|
|
case NC_QUANTIZE_BITGROOM:
|
|
xpect[0][0].u = 0x3f8e3000;
|
|
xpect[0][1].u = 0x42c7ffff;
|
|
xpect[0][2].u = 0x41200000;
|
|
xpect[0][3].u = 0x4640efff;
|
|
xpect[0][4].u = 0x42c7ffff;
|
|
double_xpect[0][0].u = 0x3ff1c60000000000;
|
|
double_xpect[0][1].u = 0xc0f869fffff583a5;
|
|
double_xpect[0][2].u = 0x4023fe0000000000;
|
|
double_xpect[0][3].u = 0x41d265ffffffffff;
|
|
double_xpect[0][4].u = 0xc0f869fffff583a5;
|
|
break;
|
|
case NC_QUANTIZE_GRANULARBR:
|
|
xpect[1][0].u = 0x3f8e0000;
|
|
xpect[1][1].u = 0x42c7ffff;
|
|
xpect[1][2].u = 0x41200000;
|
|
xpect[1][3].u = 0x46410000;
|
|
xpect[1][4].u = 0x42c7ffff;
|
|
double_xpect[1][0].u = 0x3ff1c00000000000;
|
|
double_xpect[1][1].u = 0xc0f869fffff583a5;
|
|
double_xpect[1][2].u = 0x4024000000000000;
|
|
double_xpect[1][3].u = 0x41d2600000000000;
|
|
double_xpect[1][4].u = 0xc0f869fffff583a5;
|
|
break;
|
|
case NC_QUANTIZE_BITROUND:
|
|
xpect[2][0].u = 0x3f900000;
|
|
xpect[2][1].u = 0x42c7ffff;
|
|
xpect[2][2].u = 0x41200000;
|
|
xpect[2][3].u = 0x46400000;
|
|
xpect[2][4].u = 0x42c7ffff;
|
|
double_xpect[2][0].u = 0x3ff2000000000000;
|
|
double_xpect[2][1].u = 0xc0f869fffff583a5;
|
|
double_xpect[2][2].u = 0x4024000000000000;
|
|
double_xpect[2][3].u = 0x41d2000000000000;
|
|
double_xpect[2][4].u = 0xc0f869fffff583a5;
|
|
break;
|
|
default:
|
|
ERR;
|
|
}
|
|
|
|
/* Open the file and check metadata. */
|
|
if (nc_open(FILE_NAME, NC_WRITE, &ncid)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_1,&varid1)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_2,&varid2)) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid1, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
if (nc_inq_var_quantize(ncid, varid2, &quantize_mode_in, &nsd_in)) ERR;
|
|
if (quantize_mode_in != quantize_mode[q] || nsd_in != NSD_3) ERR;
|
|
|
|
/* Check the data. */
|
|
if (nc_get_var(ncid, varid1, float_in)) ERR;
|
|
if (nc_get_var(ncid, varid2, double_in)) ERR;
|
|
#if 0
|
|
printf("\n");
|
|
#endif
|
|
for (x = 0; x < DIM_LEN_5; x++)
|
|
{
|
|
fin.f = float_in[x];
|
|
dfin.d = double_in[x];
|
|
#if 0
|
|
fout.f = float_data[x];
|
|
dfout.d = double_data[x];
|
|
printf ("float_data: %10f : 0x%x float_data_in: %10f : 0x%x\n",
|
|
float_data[x], fout.u, float_data[x], fin.u);
|
|
printf("double_data: %15g : 0x%16lx double_data_in: %15g : 0x%16lx\n",
|
|
double_data[x], dfout.u, double_data[x], dfin.u);
|
|
#endif
|
|
if (fin.u != xpect[q][x].u) ERR;
|
|
if (dfin.u != double_xpect[q][x].u) ERR;
|
|
}
|
|
|
|
/* Close the file again. */
|
|
if (nc_close(ncid)) ERR;
|
|
}
|
|
}
|
|
}
|
|
SUMMARIZE_ERR;
|
|
printf("\t*** Checking BitGroom values with type conversion between ints and floats...\n");
|
|
{
|
|
for (q = 0; q < NUM_QUANTIZE_MODES; q++)
|
|
{
|
|
int ncid;
|
|
int dimid;
|
|
int varid1, varid2;
|
|
unsigned char uc = 99;
|
|
signed char sc = -99;
|
|
unsigned short us = 9999;
|
|
signed short ss = -9999;
|
|
unsigned int ui = 9999999;
|
|
signed int si = -9999999;
|
|
unsigned long long int ull = 999999999;
|
|
signed long long int sll = -999999999;
|
|
size_t index;
|
|
|
|
printf("\t\t**** testing quantize algorithm %d...\n", quantize_mode[q]);
|
|
|
|
/* Create file. */
|
|
if (nc_create(FILE_NAME, NC_NETCDF4, &ncid)) ERR;
|
|
|
|
/* Create dims. */
|
|
if (nc_def_dim(ncid, X_NAME, DIM_LEN_8, &dimid)) ERR;
|
|
|
|
/* Create the variables. */
|
|
if (nc_def_var(ncid, VAR_NAME, NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
|
|
if (nc_def_var(ncid, VAR_NAME_2, NC_DOUBLE, NDIM1, &dimid, &varid2)) ERR;
|
|
|
|
/* Set up quantization. */
|
|
if (nc_def_var_quantize(ncid, varid1, quantize_mode[q], NSD_3)) ERR;
|
|
if (nc_def_var_quantize(ncid, varid2, quantize_mode[q], NSD_3)) ERR;
|
|
|
|
/* For classic mode, we must call enddef. */
|
|
if (m)
|
|
if (nc_enddef(ncid)) ERR;
|
|
|
|
/* Write data. */
|
|
index = 0;
|
|
if (nc_put_var1_uchar(ncid, varid1, &index, &uc)) ERR;
|
|
if (nc_put_var1_uchar(ncid, varid2, &index, &uc)) ERR;
|
|
index = 1;
|
|
if (nc_put_var1_schar(ncid, varid1, &index, &sc)) ERR;
|
|
if (nc_put_var1_schar(ncid, varid2, &index, &sc)) ERR;
|
|
index = 2;
|
|
if (nc_put_var1_ushort(ncid, varid1, &index, &us)) ERR;
|
|
if (nc_put_var1_ushort(ncid, varid2, &index, &us)) ERR;
|
|
index = 3;
|
|
if (nc_put_var1_short(ncid, varid1, &index, &ss)) ERR;
|
|
if (nc_put_var1_short(ncid, varid2, &index, &ss)) ERR;
|
|
index = 4;
|
|
if (nc_put_var1_uint(ncid, varid1, &index, &ui)) ERR;
|
|
if (nc_put_var1_uint(ncid, varid2, &index, &ui)) ERR;
|
|
index = 5;
|
|
if (nc_put_var1_int(ncid, varid1, &index, &si)) ERR;
|
|
if (nc_put_var1_int(ncid, varid2, &index, &si)) ERR;
|
|
index = 6;
|
|
if (nc_put_var1_ulonglong(ncid, varid1, &index, &ull)) ERR;
|
|
if (nc_put_var1_ulonglong(ncid, varid2, &index, &ull)) ERR;
|
|
index = 7;
|
|
if (nc_put_var1_longlong(ncid, varid1, &index, &sll)) ERR;
|
|
if (nc_put_var1_longlong(ncid, varid2, &index, &sll)) ERR;
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
|
|
{
|
|
float float_data_in[DIM_LEN_8];
|
|
double double_data_in[DIM_LEN_8];
|
|
int x;
|
|
|
|
/* Now reopen the file and check. */
|
|
if (nc_open(FILE_NAME, NC_NETCDF4, &ncid)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME,&varid1)) ERR;
|
|
if (nc_inq_varid(ncid,VAR_NAME_2,&varid2)) ERR;
|
|
|
|
/* Read the data. */
|
|
if (nc_get_var_float(ncid, varid1, float_data_in)) ERR;
|
|
if (nc_get_var_double(ncid, varid2, double_data_in)) ERR;
|
|
|
|
union FU xpect[NUM_QUANTIZE_MODES][DIM_LEN_8];
|
|
union DU double_xpect[NUM_QUANTIZE_MODES][DIM_LEN_8];
|
|
|
|
/* This test comes up with different answers to this than
|
|
* the corresponding bitgroom filter test, but that's
|
|
* OK. In netcdf-c quantization is applied as the data are
|
|
* written by the user, but in HDF5 filters, the bitgroom
|
|
* filter is applied to all data values as they are
|
|
* written to disk. See
|
|
* https://github.com/ccr/ccr/issues/194 for a full
|
|
* explanation. */
|
|
switch (quantize_mode[q])
|
|
{
|
|
case NC_QUANTIZE_BITGROOM:
|
|
xpect[0][0].u = 0x42c60000;
|
|
xpect[0][1].u = 0xc2c60000;
|
|
xpect[0][2].u = 0x461c3000;
|
|
xpect[0][3].u = 0xc61c3000;
|
|
xpect[0][4].u = 0x4b189000;
|
|
xpect[0][5].u = 0xcb189000;
|
|
xpect[0][6].u = 0x4e6e6000;
|
|
xpect[0][7].u = 0xce6e6000;
|
|
double_xpect[0][0].u = 0x4058c00000000000;
|
|
double_xpect[0][1].u = 0xc058c00000000000;
|
|
double_xpect[0][2].u = 0x40c3860000000000;
|
|
double_xpect[0][3].u = 0xc0c3860000000000;
|
|
double_xpect[0][4].u = 0x4163120000000000;
|
|
double_xpect[0][5].u = 0xc163120000000000;
|
|
double_xpect[0][6].u = 0x41cdcc0000000000;
|
|
double_xpect[0][7].u = 0xc1cdcc0000000000;
|
|
break;
|
|
case NC_QUANTIZE_GRANULARBR:
|
|
xpect[1][0].u = 0x42c60000;
|
|
xpect[1][1].u = 0xc2c60000;
|
|
xpect[1][2].u = 0x461c4000;
|
|
xpect[1][3].u = 0xc61c4000;
|
|
xpect[1][4].u = 0x4b18a000;
|
|
xpect[1][5].u = 0xcb18a000;
|
|
xpect[1][6].u = 0x4e6e6000;
|
|
xpect[1][7].u = 0xce6e6000;
|
|
double_xpect[1][0].u = 0x4058c00000000000;
|
|
double_xpect[1][1].u = 0xc058c00000000000;
|
|
double_xpect[1][2].u = 0x40c3880000000000;
|
|
double_xpect[1][3].u = 0xc0c3880000000000;
|
|
double_xpect[1][4].u = 0x4163140000000000;
|
|
double_xpect[1][5].u = 0xc163140000000000;
|
|
double_xpect[1][6].u = 0x41cdcc0000000000;
|
|
double_xpect[1][7].u = 0xc1cdcc0000000000;
|
|
break;
|
|
case NC_QUANTIZE_BITROUND:
|
|
xpect[2][0].u = 0x42c00000;
|
|
xpect[2][1].u = 0xc2c00000;
|
|
xpect[2][2].u = 0x46200000;
|
|
xpect[2][3].u = 0xc6200000;
|
|
xpect[2][4].u = 0x4b200000;
|
|
xpect[2][5].u = 0xcb200000;
|
|
xpect[2][6].u = 0x4e700000;
|
|
xpect[2][7].u = 0xce700000;
|
|
double_xpect[2][0].u = 0x4058000000000000;
|
|
double_xpect[2][1].u = 0xc058000000000000;
|
|
double_xpect[2][2].u = 0x40c4000000000000;
|
|
double_xpect[2][3].u = 0xc0c4000000000000;
|
|
double_xpect[2][4].u = 0x4164000000000000;
|
|
double_xpect[2][5].u = 0xc164000000000000;
|
|
double_xpect[2][6].u = 0x41ce000000000000;
|
|
double_xpect[2][7].u = 0xc1ce000000000000;
|
|
break;
|
|
default:
|
|
ERR;
|
|
}
|
|
|
|
for (x = 0; x < DIM_LEN_8; x++)
|
|
{
|
|
union FU fin;
|
|
union DU dfin;
|
|
fin.f = float_data_in[x];
|
|
dfin.d = double_data_in[x];
|
|
#if 0
|
|
printf ("%d float_data_in : %08.8f : 0x%x expected %08.8f : 0x%x\n",
|
|
x, float_data_in[x], fin.u, xpect[q][x].f, xpect[q][x].u);
|
|
printf ("%d double_data_in : %15g : 0x%lx expected %15g : 0x%lx\n",
|
|
x, double_data_in[x], dfin.u, double_xpect[q][x].d, double_xpect[q][x].u);
|
|
#endif
|
|
if (fin.u != xpect[q][x].u) ERR;
|
|
if (dfin.u != double_xpect[q][x].u) ERR;
|
|
}
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
}
|
|
}
|
|
}
|
|
SUMMARIZE_ERR;
|
|
printf("\t**** Nice, simple example of using BitGroom plus zlib...");
|
|
{
|
|
#define DIM_LEN_SIMPLE 100
|
|
#define EPSILON .1
|
|
int ncid;
|
|
int dimid;
|
|
int varid1, varid2;
|
|
float *float_data;
|
|
double *double_data;
|
|
int i;
|
|
|
|
/* Set up some data to write. */
|
|
if (!(float_data = malloc(DIM_LEN_SIMPLE * sizeof(float))))
|
|
ERR;
|
|
if (!(double_data = malloc(DIM_LEN_SIMPLE * sizeof(double))))
|
|
ERR;
|
|
for (i = 0; i < DIM_LEN_SIMPLE; i++)
|
|
{
|
|
float_data[i] = 1.5f * (float)i;
|
|
double_data[i] = 1.5 * (double)i;
|
|
}
|
|
|
|
/* Create the file. */
|
|
if (nc_create(FILE_NAME, NC_NETCDF4, &ncid)) ERR;
|
|
|
|
/* Add one dimension. */
|
|
if (nc_def_dim(ncid, "dim1", DIM_LEN_SIMPLE, &dimid)) ERR;
|
|
|
|
/* Create two variables, one float, one double. Quantization
|
|
* may only be applied to floating point data. */
|
|
if (nc_def_var(ncid, "var1", NC_FLOAT, NDIM1, &dimid, &varid1)) ERR;
|
|
if (nc_def_var(ncid, "var2", NC_DOUBLE, NDIM1, &dimid, &varid2)) ERR;
|
|
|
|
/* Set up quantization. This will not make the data any
|
|
* smaller, unless compression is also turned on. In this
|
|
* case, we will set 3 significant digits. */
|
|
if (nc_def_var_quantize(ncid, varid1, NC_QUANTIZE_BITGROOM, NSD_3)) ERR;
|
|
if (nc_def_var_quantize(ncid, varid2, NC_QUANTIZE_BITGROOM, NSD_3)) ERR;
|
|
|
|
#ifdef TESTNCZARR
|
|
#ifdef ENABLE_NCZARR_FILTERS
|
|
/* Set up zlib compression. This will work better because the
|
|
* data are quantized, yielding a smaller output file. We will
|
|
* set compression level to 1, which is usually the best
|
|
* choice. */
|
|
if (nc_def_var_deflate(ncid, varid1, 0, 1, 1)) ERR;
|
|
#endif
|
|
#endif
|
|
/* For classic mode, we must call enddef. */
|
|
if (m)
|
|
if (nc_enddef(ncid)) ERR;
|
|
|
|
/* Write the data. */
|
|
if (nc_put_var_float(ncid, varid1, float_data)) ERR;
|
|
if (nc_put_var_double(ncid, varid2, double_data)) ERR;
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
|
|
/* Check the resulting file for correctness. */
|
|
{
|
|
float float_data_in[DIM_LEN_SIMPLE];
|
|
double double_data_in[DIM_LEN_SIMPLE];
|
|
|
|
/* Now reopen the file and check. */
|
|
if (nc_open(FILE_NAME, NC_NETCDF4, &ncid)) ERR;
|
|
if (nc_inq_varid(ncid,"var1",&varid1)) ERR;
|
|
if (nc_inq_varid(ncid,"var2",&varid2)) ERR;
|
|
|
|
/* Read the data. */
|
|
if (nc_get_var_float(ncid, varid1, float_data_in)) ERR;
|
|
if (nc_get_var_double(ncid, varid2, double_data_in)) ERR;
|
|
|
|
for (i = 0; i < DIM_LEN_SIMPLE; i++)
|
|
{
|
|
if (fabs(float_data_in[i] - float_data[i]) > EPSILON)
|
|
ERR;
|
|
if (fabs(double_data_in[i] - double_data[i]) > EPSILON)
|
|
ERR;
|
|
}
|
|
|
|
/* Close the file. */
|
|
if (nc_close(ncid)) ERR;
|
|
}
|
|
|
|
/* Free resources. */
|
|
free(float_data);
|
|
free(double_data);
|
|
}
|
|
SUMMARIZE_ERR;
|
|
}
|
|
FINAL_RESULTS;
|
|
}
|