mirror of
https://github.com/Unidata/netcdf-c.git
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11fe00ea05
Filter support has three goals: 1. Use the existing HDF5 filter implementations, 2. Allow filter metadata to be stored in the NumCodecs metadata format used by Zarr, 3. Allow filters to be used even when HDF5 is disabled Detailed usage directions are define in docs/filters.md. For now, the existing filter API is left in place. So filters are defined using ''nc_def_var_filter'' using the HDF5 style where the id and parameters are unsigned integers. This is a big change since filters affect many parts of the code. In the following, the terms "compressor" and "filter" and "codec" are generally used synonomously. ### Filter-Related Changes: * In order to support dynamic loading of shared filter libraries, a new library was added in the libncpoco directory; it helps to isolate dynamic loading across multiple platforms. * Provide a json parsing library for use by plugins; this is created by merging libdispatch/ncjson.c with include/ncjson.h. * Add a new _Codecs attribute to allow clients to see what codecs are being used; let ncdump -s print it out. * Provide special headers to help support compilation of HDF5 filters when HDF5 is not enabled: netcdf_filter_hdf5_build.h and netcdf_filter_build.h. * Add a number of new test to test the new nczarr filters. * Let ncgen parse _Codecs attribute, although it is ignored. ### Plugin directory changes: * Add support for the Blosc compressor; this is essential because it is the most common compressor used in Zarr datasets. This also necessitated adding a CMake FindBlosc.cmake file * Add NCZarr support for the big-four filters provided by HDF5: shuffle, fletcher32, deflate (zlib), and szip * Add a Codec defaulter (see docs/filters.md) for the big four filters. * Make plugins work with windows by properly adding __declspec declaration. ### Misc. Non-Filter Changes * Replace most uses of USE_NETCDF4 (deprecated) with USE_HDF5. * Improve support for caching * More fixes for path conversion code * Fix misc. memory leaks * Add new utility -- ncdump/ncpathcvt -- that does more or less the same thing as cygpath. * Add a number of new test to test the non-filter fixes. * Update the parsers * Convert most instances of '#ifdef _MSC_VER' to '#ifdef _WIN32'
224 lines
5.0 KiB
Bash
Executable File
224 lines
5.0 KiB
Bash
Executable File
#!/bin/sh
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if test "x$srcdir" = x ; then srcdir=`pwd`; fi
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. ../test_common.sh
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# Since this involves a shared resource: the .rc files in current working directory,
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# we need to isolate from any other test.
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# Make sure execdir and srcdir absolute paths are available
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WD=`pwd`
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cd $srcdir ; abs_srcdir=`pwd` ; cd $WD
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cd $execdir ; abs_execdir=`pwd` ; cd $WD
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# Now create a special directory
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# And enter it to execute tests
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rm -fr rcauthdir
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mkdir rcauthdir
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cd rcauthdir
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WD=`pwd`
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#SHOW=1
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#DBG=1
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if test "x$NCAUTH_HOMETEST" != x ; then
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RCHOME=1
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fi
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COOKIES="${WD}/.cookies_test"
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RC=.daprc
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if test "x$FPISMSVC" = x ; then
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NETRC=.netrc_test
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NETRCIMP=.netrc
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else
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NETRC=_netrc_test
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NETRCIMP=_netrc
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fi
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LOCALRCFILES="$WD/.dodsrc $WD/.daprc $WD/.ncrc $WD/$NETRC $WD/$NETRCIMP"
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HOMERCFILES="$HOME/.dodsrc $HOME/.daprc $HOME/.ncrc $HOME/$NETRC $HOME/$NETRCIMP"
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NETRCFILE=$WD/$NETRC
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DAPRCFILE=$WD/$RC
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if test "x$FP_ISMSVC" != x ; then
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LOCALRCFILES=`${NCPATHCVT} "$LOCALRCFILES"`
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HOMERCFILES=`${NCPATHCVT} "$HOMERCFILES"`
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NETRCFILE=`${NCPATHCVT} "$NETRCFILE"`
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DAPRCFILE=`${NCPATHCVT} "$DAPRCFILE"`
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fi
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HOMENETRCFILE=$HOME/$NETRC
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HOMEDAPRCFILE=$HOME/$RC
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if test "x$DBG" = x1 ; then
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SHOW=1
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fi
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# Major parameters
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AUTHSERVER="thredds.ucar.edu"
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BASICCOMBO="authtester:auth"
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URLPATH="thredds/dodsC/test3/testData.nc"
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PROTO=https
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URLSERVER=${AUTHSERVER}
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if test "x$DBG" = x1 ; then
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URLPATH="${URLPATH}#log&show=fetch"
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fi
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# Split the combo
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BASICUSER=`echo $BASICCOMBO | cut -d: -f1`
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BASICPWD=`echo $BASICCOMBO | cut -d: -f2`
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if test "x$TEMP" = x ; then
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TEMP="/tmp"
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fi
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TEMP=`echo "$TEMP" | sed -e "s|/$||"`
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LOCALRC=${WD}/$RC
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LOCALNETRC=${WD}/$NETRC
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HOMERC=${HOME}/$RC
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HOMERC=`echo "$HOMERC" | sed -e "s|//|/|g"`
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HOMENETRC=${HOME}/$NETRC
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HOMENETRC=`echo "$HOMENETRC" | sed -e "s|//|/|g"`
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createrc() {
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local RCP
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local NETRCFILE
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RCP="$1"
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if test "x$RCP" = x ; then
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echo "createrc: no rc specified"
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exit 1
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fi
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shift
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NETRCPATH="$1"
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echo "Creating rc file $RCP"
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if test "x${DBG}" = x1 ; then
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echo "HTTP.VERBOSE=1" >>$RCP
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fi
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if test "x$NETRCPATH" = x ; then
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echo "HTTP.CREDENTIALS.USERPASSWORD=${BASICCOMBO}" >>$RCP
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elif test "x$NETRCPATH" != ximplicit ; then
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echo "HTTP.NETRC=${NETRCPATH}" >>$RCP
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elif test "x$NETRCPATH" = ximplicit ; then
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echo "HTTP.NETRC=" >>$RCP
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fi
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echo "HTTP.COOKIEJAR=${COOKIES}" >>$RCP
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}
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createnetrc() {
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local NETRCPATH
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NETRCPATH="$1"; # netrc file path
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if test "x$NETRCPATH" = x ; then return; fi
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echo "Creating netrc file $NETRCPATH"
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# echo -n "${PROTO}://$URLSERVER/$URLPATH" >>$NETRCPATH
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echo -n "machine $URLSERVER" >>$NETRCPATH
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echo -n " login $BASICUSER password $BASICPWD" >>$NETRCPATH
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echo "" >>$NETRCPATH
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chmod go-rwx $NETRCPATH
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}
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# Test cases
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# Case: !daprc !netrc embedded usr:pwd
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rcembed() {
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echo "***Testing with embedded user:pwd"
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reset
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URL="${PROTO}://${BASICCOMBO}@${URLSERVER}/$URLPATH"
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# Invoke ncdump to extract a file the URL
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${NCDUMP} -h "$URL" > testauthoutput
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}
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# Case: local daprc no netrc no embed
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rclocal1() {
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echo "***Testing rc file in local directory"
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reset
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# Create the rc file in ./
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createrc $LOCALRC
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# Invoke ncdump to extract a file using the URL
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${NCDUMP} -h "$URL" > testauthoutput
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}
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# Case: local daprc local netrc no embed
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rclocal2() {
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echo "***Testing rc file + .netrc in local directory"
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reset
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# Create the rc file and (optional) netrc file in ./
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createnetrc $LOCALNETRC
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createrc $LOCALRC $LOCALNETRC
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# Invoke ncdump to extract a file using the URL
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${NCDUMP} -h "$URL" > testauthoutput
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}
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# Case: home rc no netrc no embed
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rchome1() {
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echo "***Testing home rc file no netrc in home directory"
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reset
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# Create the rc file file in ./
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createrc $HOMERC
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# Invoke ncdump to extract a file the URL
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${NCDUMP} -h "$URL" > testauthoutput
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}
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# Case: home daprc implicit home netrc no embed
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rchome2() {
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echo "***Testing .netrc file in home directory"
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reset
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createnetrc $HOME/$NETRCIMP
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createrc $HOMERC implicit
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# Invoke ncdump to extract a file using the URL
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${NCDUMP} -h "$URL" > testauthoutput
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}
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# Case: local rc explicit netrc no embed
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rchome3() {
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echo "***Testing local rc file and .netrc explicit in home directory"
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reset
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# Create the rc file and (optional) netrc file in ./
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createnetrc $HOME/$NETRC
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createrc $LOCALRC $HOME/$NETRC
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# Invoke ncdump to extract a file the URL
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${NCDUMP} -h "$URL" > testauthoutput
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}
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# Case: local rc implicit netrc no embed
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rchome4() {
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echo "***Testing local rc file and .netrc implicit in home directory"
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reset
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# Create the rc file and (optional) netrc file in ./
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createnetrc $HOME/$NETRCIMP
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createrc $LOCALRC implicit
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# Invoke ncdump to extract a file the URL
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${NCDUMP} -h "$URL" > testauthoutput
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}
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reset() {
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if test "x$RCHOME" = x1 ; then
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rm -f $HOMERCFILES
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fi
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rm -f $LOCALRCFILES
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unset DAPRCFILE
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rm -f ./testauthoutput
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}
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rcembed
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# Next set tests assume these defaults
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URL="${PROTO}://${URLSERVER}/$URLPATH"
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rclocal1
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rclocal2
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# Do not do this unless you know what you are doing
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if test "x$RCHOME" = x1 ; then
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rchome1
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rchome2
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rchome3
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rchome4
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fi
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reset
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exit
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