netcdf-c/libdispatch/dutil.c
wkliao 9c33cfc62c use malloc to increase read chunk size from 1 KB to 4 MB
Otherwise running command below as part of nc_test/run_inmemory.sh can
be very slow
    ./tst_diskless4 500000000 opendiskless
2022-06-18 13:06:37 -05:00

486 lines
10 KiB
C

/*********************************************************************
* Copyright 2018, UCAR/Unidata
* See netcdf/COPYRIGHT file for copying and redistribution conditions.
*********************************************************************/
#include "config.h"
#include <stdlib.h>
#include <string.h>
#include <stdio.h>
#include <assert.h>
#ifdef HAVE_UNISTD_H
#include <unistd.h>
#endif
#ifdef HAVE_SYS_STAT_H
#include <sys/stat.h>
#endif
#ifdef HAVE_FCNTL_H
#include <fcntl.h>
#endif
#ifdef _MSC_VER
#include <io.h>
#endif
#include "netcdf.h"
#include "ncuri.h"
#include "ncbytes.h"
#include "nclist.h"
#include "nclog.h"
#include "ncrc.h"
#include "ncpathmgr.h"
#define NC_MAX_PATH 4096
#ifndef nulldup
#define nulldup(x) ((x)?strdup(x):(x))
#endif
/**************************************************/
/** \internal
* Provide a hidden interface to allow utilities
* to check if a given path name is really an ncdap4 url.
* If no, return null, else return basename of the url
* minus any extension.
*/
int
NC__testurl(const char* path, char** basenamep)
{
NCURI* uri;
int ok = NC_NOERR;
if(ncuriparse(path,&uri))
ok = NC_EURL;
else {
char* slash = (uri->path == NULL ? NULL : strrchr(uri->path, '/'));
char* dot;
if(slash == NULL) slash = (char*)path; else slash++;
slash = nulldup(slash);
if(slash == NULL)
dot = NULL;
else
dot = strrchr(slash, '.');
if(dot != NULL && dot != slash) *dot = '\0';
if(basenamep)
*basenamep=slash;
else if(slash)
free(slash);
}
ncurifree(uri);
return ok;
}
/** \internal Return 1 if this machine is little endian */
int
NC_isLittleEndian(void)
{
union {
unsigned char bytes[SIZEOF_INT];
int i;
} u;
u.i = 1;
return (u.bytes[0] == 1 ? 1 : 0);
}
/** \internal */
char*
NC_backslashEscape(const char* s)
{
const char* p;
char* q;
size_t len;
char* escaped = NULL;
len = strlen(s);
escaped = (char*)malloc(1+(2*len)); /* max is everychar is escaped */
if(escaped == NULL) return NULL;
for(p=s,q=escaped;*p;p++) {
char c = *p;
switch (c) {
case '\\':
case '/':
case '.':
case '@':
*q++ = '\\'; *q++ = '\\';
break;
default: *q++ = c; break;
}
}
*q = '\0';
return escaped;
}
/** \internal */
char*
NC_backslashUnescape(const char* esc)
{
size_t len;
char* s;
const char* p;
char* q;
if(esc == NULL) return NULL;
len = strlen(esc);
s = (char*)malloc(len+1);
if(s == NULL) return NULL;
for(p=esc,q=s;*p;) {
switch (*p) {
case '\\':
p++;
/* fall thru */
default: *q++ = *p++; break;
}
}
*q = '\0';
return s;
}
/** \internal */
char*
NC_entityescape(const char* s)
{
const char* p;
char* q;
size_t len;
char* escaped = NULL;
const char* entity;
len = strlen(s);
escaped = (char*)malloc(1+(6*len)); /* 6 = |&apos;| */
if(escaped == NULL) return NULL;
for(p=s,q=escaped;*p;p++) {
char c = *p;
switch (c) {
case '&': entity = "&amp;"; break;
case '<': entity = "&lt;"; break;
case '>': entity = "&gt;"; break;
case '"': entity = "&quot;"; break;
case '\'': entity = "&apos;"; break;
default : entity = NULL; break;
}
if(entity == NULL)
*q++ = c;
else {
len = strlen(entity);
memcpy(q,entity,len);
q+=len;
}
}
*q = '\0';
return escaped;
}
/** \internal
Depending on the platform, the shell will sometimes
pass an escaped octotherpe character without removing
the backslash. So this function is appropriate to be called
on possible url paths to unescape such cases. See e.g. ncgen.
*/
char*
NC_shellUnescape(const char* esc)
{
size_t len;
char* s;
const char* p;
char* q;
if(esc == NULL) return NULL;
len = strlen(esc);
s = (char*)malloc(len+1);
if(s == NULL) return NULL;
for(p=esc,q=s;*p;) {
switch (*p) {
case '\\':
if(p[1] == '#')
p++;
/* fall thru */
default: *q++ = *p++; break;
}
}
*q = '\0';
return s;
}
/** \internal
Wrap mktmp and return the generated path,
or null if failed.
Base is the base file path. XXXXX is appended
to allow mktmp add its unique id.
Return the generated path.
*/
char*
NC_mktmp(const char* base)
{
int fd = -1;
char* tmp = NULL;
size_t len;
#ifndef HAVE_MKSTEMP
int tries;
#define MAXTRIES 4
#else
mode_t mask;
#endif
len = strlen(base)+6+1;
if((tmp = (char*)calloc(1,len))==NULL)
goto done;
#ifdef HAVE_MKSTEMP
strlcat(tmp,base,len);
strlcat(tmp, "XXXXXX", len);
mask=umask(0077);
fd = NCmkstemp(tmp);
(void)umask(mask);
#else /* !HAVE_MKSTEMP */
/* Need to simulate by using some kind of pseudo-random number */
for(tries=0;tries<MAXTRIES;tries++) {
int rno = rand();
char spid[7];
if(rno < 0) rno = -rno;
tmp[0] = '\0';
strlcat(tmp,base,len);
snprintf(spid,sizeof(spid),"%06d",rno);
strlcat(tmp,spid,len);
fd=NCopen3(tmp,O_RDWR|O_CREAT, _S_IREAD|_S_IWRITE);
if(fd >= 0) break; /* sucess */
fd = -1; /* try again */
}
#endif /* !HAVE_MKSTEMP */
if(fd < 0) {
nclog(NCLOGERR, "Could not create temp file: %s",tmp);
nullfree(tmp);
tmp = NULL;
goto done;
}
done:
if(fd >= 0) close(fd);
return tmp;
}
/** \internal */
int
NC_readfile(const char* filename, NCbytes* content)
{
int stat;
stat = NC_readfilen(filename, content, -1);
return stat;
}
int
NC_readfilen(const char* filename, NCbytes* content, long long amount)
{
int ret = NC_NOERR;
FILE* stream = NULL;
stream = NCfopen(filename,"r");
if(stream == NULL) {ret=errno; goto done;}
ret = NC_readfileF(stream,content,amount);
if (stream) fclose(stream);
done:
return ret;
}
int
NC_readfileF(FILE* stream, NCbytes* content, long long amount)
{
#define READ_BLOCK_SIZE 4194304
int ret = NC_NOERR;
long long red = 0;
char *part = (char*) malloc(4194304);
while(amount < 0 || red < amount) {
size_t count = fread(part, 1, 4194304, stream);
if(ferror(stream)) {ret = NC_EIO; goto done;}
if(count > 0) ncbytesappendn(content,part,(unsigned long)count);
red += count;
if (feof(stream)) break;
}
/* Keep only amount */
if(amount >= 0) {
if(red > amount) ncbytessetlength(content,amount); /* read too much */
if(red < amount) ret = NC_ETRUNC; /* |file| < amount */
}
ncbytesnull(content);
done:
free(part);
return ret;
}
/** \internal */
int
NC_writefile(const char* filename, size_t size, void* content)
{
int ret = NC_NOERR;
FILE* stream = NULL;
void* p;
size_t remain;
if(content == NULL) {content = ""; size = 0;}
stream = NCfopen(filename,"w");
if(stream == NULL) {ret=errno; goto done;}
p = content;
remain = size;
while(remain > 0) {
size_t written = fwrite(p, 1, remain, stream);
if(ferror(stream)) {ret = NC_EIO; goto done;}
remain -= written;
if (feof(stream)) break;
}
done:
if(stream) fclose(stream);
return ret;
}
/** \internal
Parse a path as a url and extract the modelist.
If the path is not a URL, then return a NULL list.
If a URL, but modelist is empty or does not exist,
then return empty list.
*/
int
NC_getmodelist(const char* modestr, NClist** modelistp)
{
int stat=NC_NOERR;
NClist* modelist = NULL;
modelist = nclistnew();
if(modestr == NULL || strlen(modestr) == 0) goto done;
/* Parse the mode string at the commas or EOL */
if((stat = NC_split_delim(modestr,',',modelist))) goto done;
done:
if(stat == NC_NOERR) {
if(modelistp) {*modelistp = modelist; modelist = NULL;}
} else
nclistfree(modelist);
return stat;
}
/** \internal
Check "mode=" list for a path and return 1 if present, 0 otherwise.
*/
int
NC_testpathmode(const char* path, const char* tag)
{
int found = 0;
NCURI* uri = NULL;
ncuriparse(path,&uri);
if(uri != NULL) {
found = NC_testmode(uri,tag);
ncurifree(uri);
}
return found;
}
/** \internal
Check "mode=" list for a url and return 1 if present, 0 otherwise.
*/
int
NC_testmode(NCURI* uri, const char* tag)
{
int stat = NC_NOERR;
int found = 0;
int i;
const char* modestr = NULL;
NClist* modelist = NULL;
modestr = ncurifragmentlookup(uri,"mode");
if(modestr == NULL) goto done;
/* Parse mode str */
if((stat = NC_getmodelist(modestr,&modelist))) goto done;
/* Search for tag */
for(i=0;i<nclistlength(modelist);i++) {
const char* mode = (const char*)nclistget(modelist,i);
if(strcasecmp(mode,tag)==0) {found = 1; break;}
}
done:
nclistfreeall(modelist);
return found;
}
#if ! defined __INTEL_COMPILER
#if defined __APPLE__
/** \internal */
int isinf(double x)
{
union { unsigned long long u; double f; } ieee754;
ieee754.f = x;
return ( (unsigned)(ieee754.u >> 32) & 0x7fffffff ) == 0x7ff00000 &&
( (unsigned)ieee754.u == 0 );
}
/** \internal */
int isnan(double x)
{
union { unsigned long long u; double f; } ieee754;
ieee754.f = x;
return ( (unsigned)(ieee754.u >> 32) & 0x7fffffff ) +
( (unsigned)ieee754.u != 0 ) > 0x7ff00000;
}
#endif /*APPLE*/
#endif /*!_INTEL_COMPILER*/
/** \internal */
int
NC_split_delim(const char* arg, char delim, NClist* segments)
{
int stat = NC_NOERR;
const char* p = NULL;
const char* q = NULL;
ptrdiff_t len = 0;
char* seg = NULL;
if(arg == NULL || strlen(arg)==0 || segments == NULL)
goto done;
p = arg;
if(p[0] == delim) p++;
for(;*p;) {
q = strchr(p,delim);
if(q==NULL)
q = p + strlen(p); /* point to trailing nul */
len = (q - p);
if(len == 0)
{stat = NC_EURL; goto done;}
if((seg = malloc(len+1)) == NULL)
{stat = NC_ENOMEM; goto done;}
memcpy(seg,p,len);
seg[len] = '\0';
nclistpush(segments,seg);
seg = NULL; /* avoid mem errors */
if(*q) p = q+1; else p = q;
}
done:
nullfree(seg);
return stat;
}
/** \internal concat the the segments with each segment preceded by '/' */
int
NC_join(NClist* segments, char** pathp)
{
int stat = NC_NOERR;
int i;
NCbytes* buf = NULL;
if(segments == NULL)
{stat = NC_EINVAL; goto done;}
if((buf = ncbytesnew())==NULL)
{stat = NC_ENOMEM; goto done;}
if(nclistlength(segments) == 0)
ncbytescat(buf,"/");
else for(i=0;i<nclistlength(segments);i++) {
const char* seg = nclistget(segments,i);
if(seg[0] != '/')
ncbytescat(buf,"/");
ncbytescat(buf,seg);
}
done:
if(!stat) {
if(pathp) *pathp = ncbytesextract(buf);
}
ncbytesfree(buf);
return stat;
}