netcdf-c/libnczarr/zxcache.c
Dennis Heimbigner f3e711e2b8 Add support for setting HDF5 alignment property when creating a file
re: https://github.com/Unidata/netcdf-c/issues/2177
re: https://github.com/Unidata/netcdf-c/pull/2178

Provide get/set functions to store global data alignment
information and apply it when a file is created.

The api is as follows:
````
int nc_set_alignment(int threshold, int alignment);
int nc_get_alignment(int* thresholdp, int* alignmentp);
````

If defined, then for every file created opened after the call to
nc_set_alignment, for every new variable added to the file, the
most recently set threshold and alignment values will be applied
to that variable.

The nc_get_alignment function return the last values set by
nc_set_alignment.  If nc_set_alignment has not been called, then
it returns the value 0 for both threshold and alignment.

The alignment parameters are stored in the NCglobalstate object
(see below) for use as needed. Repeated calls to nc_set_alignment
will overwrite any existing values in NCglobalstate.

The alignment parameters are applied in libhdf5/hdf5create.c
and libhdf5/hdf5open.c

The set/get alignment functions are defined in libsrc4/nc4internal.c.

A test program was added as nc_test4/tst_alignment.c.

## Misc. Changes Unrelated to Alignment

* The NCRCglobalstate type was renamed to NCglobalstate to
  indicate that it represented more general global state than
  just .rc data.  It was also moved to nc4internal.h.  This led
  to a large number of small changes: mostly renaming. The
  global state management functions were moved to nc4internal.c.

* The global chunk cache variables have been moved into
  NCglobalstate.  As warranted, other global state will be moved
  as well.

* Some misc. problems with the nczarr performance tests were corrected.
2022-01-29 15:27:52 -07:00

831 lines
23 KiB
C

/* Copyright 2018, University Corporation for Atmospheric
* Research. See COPYRIGHT file for copying and redistribution
* conditions. */
/**
* @file @internal The functions which control NCZ
* caching. These caching controls allow the user to change the cache
* sizes of ZARR before opening files.
*
* @author Dennis Heimbigner, Ed Hartnett
*/
#include "zincludes.h"
#include "zcache.h"
#include "ncxcache.h"
#include "zfilter.h"
#undef DEBUG
#undef FLUSH
#define LEAFLEN 32
/* Forward */
static int get_chunk(NCZChunkCache* cache, NCZCacheEntry* entry);
static int put_chunk(NCZChunkCache* cache, NCZCacheEntry*);
static int makeroom(NCZChunkCache* cache);
static int flushcache(NCZChunkCache* cache);
static int constraincache(NCZChunkCache* cache);
/**************************************************/
/* Dispatch table per-var cache functions */
/**
* @internal Set chunk cache size for a variable. This is the internal
* function called by nc_set_var_chunk_cache().
*
* @param ncid File ID.
* @param varid Variable ID.
* @param size Size in bytes to set cache.
* @param nelems # of entries in cache
* @param preemption Controls cache swapping.
*
* @returns ::NC_NOERR No error.
* @returns ::NC_EBADID Bad ncid.
* @returns ::NC_ENOTVAR Invalid variable ID.
* @returns ::NC_ESTRICTNC3 Attempting netcdf-4 operation on strict
* nc3 netcdf-4 file.
* @returns ::NC_EINVAL Invalid input.
* @returns ::NC_EHDFERR HDF5 error.
* @author Ed Hartnett
*/
int
NCZ_set_var_chunk_cache(int ncid, int varid, size_t cachesize, size_t nelems, float preemption)
{
NC_GRP_INFO_T *grp;
NC_FILE_INFO_T *h5;
NC_VAR_INFO_T *var;
NCZ_VAR_INFO_T *zvar;
int retval = NC_NOERR;
/* Check input for validity. */
if (preemption < 0 || preemption > 1)
{retval = NC_EINVAL; goto done;}
/* Find info for this file and group, and set pointer to each. */
if ((retval = nc4_find_nc_grp_h5(ncid, NULL, &grp, &h5)))
goto done;
assert(grp && h5);
/* Find the var. */
if (!(var = (NC_VAR_INFO_T *)ncindexith(grp->vars, varid)))
{retval = NC_ENOTVAR; goto done;}
assert(var && var->hdr.id == varid);
zvar = (NCZ_VAR_INFO_T*)var->format_var_info;
assert(zvar != NULL && zvar->cache != NULL);
/* Set the values. */
var->chunkcache.size = cachesize;
var->chunkcache.nelems = nelems;
var->chunkcache.preemption = preemption;
/* Fix up cache */
if((retval = NCZ_adjust_var_cache(var))) goto done;
done:
return retval;
}
/**
* @internal Adjust the chunk cache of a var for better
* performance.
*
* @note For contiguous and compact storage vars, or when parallel I/O
* is in use, this function will do nothing and return ::NC_NOERR;
*
* @param grp Pointer to group info struct.
* @param var Pointer to var info struct.
*
* @return ::NC_NOERR No error.
* @author Ed Hartnett
*/
int
NCZ_adjust_var_cache(NC_VAR_INFO_T *var)
{
int stat = NC_NOERR;
NCZ_VAR_INFO_T* zvar = (NCZ_VAR_INFO_T*)var->format_var_info;
NCZChunkCache* zcache = NULL;
zcache = zvar->cache;
if(zcache->valid) goto done;
#ifdef DEBUG
fprintf(stderr,"xxx: adjusting cache for: %s\n",var->hdr.name);
#endif
/* completely empty the cache */
flushcache(zcache);
/* Reclaim any existing fill_chunk */
if((stat = NCZ_reclaim_fill_chunk(zcache))) goto done;
/* Reset the parameters */
zvar->cache->maxsize = var->chunkcache.size;
zvar->cache->maxentries = var->chunkcache.nelems;
#ifdef DEBUG
fprintf(stderr,"%s.cache.adjust: size=%ld nelems=%ld\n",
var->hdr.name,(unsigned long)zvar->cache->maxsize,(unsigned long)zvar->cache->maxentries);
#endif
/* One more thing, adjust the chunksize and count*/
zcache->chunksize = zvar->chunksize;
zcache->chunkcount = 1;
if(var->ndims > 0) {
int i;
for(i=0;i<var->ndims;i++) {
zcache->chunkcount *= var->chunksizes[i];
}
}
zcache->valid = 1;
done:
return stat;
}
/**************************************************/
/**
* Create a chunk cache object
*
* @param var containing var
* @param entrysize Size in bytes of an entry
* @param cachep return cache pointer
*
* @return ::NC_NOERR No error.
* @return ::NC_EINVAL Bad preemption.
* @author Dennis Heimbigner, Ed Hartnett
*/
int
NCZ_create_chunk_cache(NC_VAR_INFO_T* var, size64_t chunksize, char dimsep, NCZChunkCache** cachep)
{
int stat = NC_NOERR;
NCZChunkCache* cache = NULL;
void* fill = NULL;
NCZ_VAR_INFO_T* zvar = NULL;
if(chunksize == 0) return NC_EINVAL;
zvar = (NCZ_VAR_INFO_T*)var->format_var_info;
if((cache = calloc(1,sizeof(NCZChunkCache))) == NULL)
{stat = NC_ENOMEM; goto done;}
cache->var = var;
cache->ndims = var->ndims + zvar->scalar;
cache->fillchunk = NULL;
cache->chunksize = chunksize;
cache->dimension_separator = dimsep;
zvar->cache = cache;
cache->chunkcount = 1;
if(var->ndims > 0) {
int i;
for(i=0;i<var->ndims;i++) {
cache->chunkcount *= var->chunksizes[i];
}
}
#ifdef FLUSH
cache->maxentries = 1;
#endif
#ifdef DEBUG
fprintf(stderr,"%s.cache: nelems=%ld size=%ld\n",
var->hdr.name,(unsigned long)cache->maxentries,(unsigned long)cache->maxsize);
#endif
if((stat = ncxcachenew(LEAFLEN,&cache->xcache))) goto done;
if((cache->mru = nclistnew()) == NULL)
{stat = NC_ENOMEM; goto done;}
nclistsetalloc(cache->mru,cache->maxentries);
if(cachep) {*cachep = cache; cache = NULL;}
done:
nullfree(fill);
NCZ_free_chunk_cache(cache);
return THROW(stat);
}
static void
free_cache_entry(NCZCacheEntry* entry)
{
if(entry) {
nullfree(entry->data);
nullfree(entry->key.varkey);
nullfree(entry->key.chunkkey);
nullfree(entry);
}
}
void
NCZ_free_chunk_cache(NCZChunkCache* cache)
{
if(cache == NULL) return;
ZTRACE(4,"cache.var=%s",cache->var->hdr.name);
/* Iterate over the entries */
while(nclistlength(cache->mru) > 0) {
void* ptr;
NCZCacheEntry* entry = nclistremove(cache->mru,0);
(void)ncxcacheremove(cache->xcache,entry->hashkey,&ptr);
assert(ptr == entry);
free_cache_entry(entry);
}
#ifdef DEBUG
fprintf(stderr,"|cache.free|=%ld\n",nclistlength(cache->mru));
#endif
ncxcachefree(cache->xcache);
nclistfree(cache->mru);
cache->mru = NULL;
(void)NCZ_reclaim_fill_chunk(cache);
nullfree(cache);
(void)ZUNTRACE(NC_NOERR);
}
size64_t
NCZ_cache_entrysize(NCZChunkCache* cache)
{
assert(cache);
return cache->chunksize;
}
/* Return number of active entries in cache */
size64_t
NCZ_cache_size(NCZChunkCache* cache)
{
assert(cache);
return nclistlength(cache->mru);
}
int
NCZ_read_cache_chunk(NCZChunkCache* cache, const size64_t* indices, void** datap)
{
int stat = NC_NOERR;
int rank = cache->ndims;
NCZCacheEntry* entry = NULL;
ncexhashkey_t hkey = 0;
int created = 0;
/* the hash key */
hkey = ncxcachekey(indices,sizeof(size64_t)*cache->ndims);
/* See if already in cache */
stat = ncxcachelookup(cache->xcache,hkey,(void**)&entry);
switch(stat) {
case NC_NOERR:
/* Move to front of the lru */
(void)ncxcachetouch(cache->xcache,hkey);
break;
case NC_ENOOBJECT:
entry = NULL; /* not found; */
break;
default: goto done;
}
if(entry == NULL) { /*!found*/
/* Create a new entry */
if((entry = calloc(1,sizeof(NCZCacheEntry)))==NULL)
{stat = NC_ENOMEM; goto done;}
memcpy(entry->indices,indices,rank*sizeof(size64_t));
/* Create the key for this cache */
if((stat = NCZ_buildchunkpath(cache,indices,&entry->key))) goto done;
entry->hashkey = hkey;
assert(entry->data == NULL && entry->size == 0);
/* Try to read the object from "disk"; might change size; will create if non-existent */
if((stat=get_chunk(cache,entry))) goto done;
assert(entry->data != NULL);
/* Ensure cache constraints not violated; but do it before entry is added */
if((stat=makeroom(cache))) goto done;
nclistpush(cache->mru,entry);
if((stat = ncxcacheinsert(cache->xcache,entry->hashkey,entry))) goto done;
}
#ifdef DEBUG
fprintf(stderr,"|cache.read.lru|=%ld\n",nclistlength(cache->mru));
#endif
if(datap) *datap = entry->data;
entry = NULL;
done:
if(created && stat == NC_NOERR) stat = NC_EEMPTY; /* tell upper layers */
if(entry) free_cache_entry(entry);
return THROW(stat);
}
#if 0
int
NCZ_write_cache_chunk(NCZChunkCache* cache, const size64_t* indices, void* content)
{
int stat = NC_NOERR;
int rank = cache->ndims;
NCZCacheEntry* entry = NULL;
ncexhashkey_t hkey;
/* create the hash key */
hkey = ncxcachekey(indices,sizeof(size64_t)*cache->ndims);
if(entry == NULL) { /*!found*/
/* Create a new entry */
if((entry = calloc(1,sizeof(NCZCacheEntry)))==NULL)
{stat = NC_ENOMEM; goto done;}
memcpy(entry->indices,indices,rank*sizeof(size64_t));
if((stat = NCZ_buildchunkpath(cache,indices,&entry->key))) goto done;
entry->hashkey = hkey;
/* Create the local copy space */
entry->size = cache->chunksize;
if((entry->data = calloc(1,cache->chunksize)) == NULL)
{stat = NC_ENOMEM; goto done;}
memcpy(entry->data,content,cache->chunksize);
}
entry->modified = 1;
nclistpush(cache->mru,entry); /* MRU order */
#ifdef DEBUG
fprintf(stderr,"|cache.write|=%ld\n",nclistlength(cache->mru));
#endif
entry = NULL;
/* Ensure cache constraints not violated */
if((stat=makeroom(cache))) goto done;
done:
if(entry) free_cache_entry(entry);
return THROW(stat);
}
#endif
/* Constrain cache, but allow at least one entry */
static int
makeroom(NCZChunkCache* cache)
{
int stat = NC_NOERR;
/* Sanity check; make sure at least one entry is always allowed */
if(nclistlength(cache->mru) == 1)
goto done;
stat = constraincache(cache);
done:
return stat;
}
/* Completely flush cache */
static int
flushcache(NCZChunkCache* cache)
{
cache->maxentries = 0;
return constraincache(cache);
}
/* Remove entries to ensure cache is not
violating any of its constraints.
On entry, constraints might be violated.
Make sure that the entryinuse (NULL => no constraint) is not reclaimed.
*/
static int
constraincache(NCZChunkCache* cache)
{
int stat = NC_NOERR;
/* If the cache is empty then do nothing */
if(cache->used == 0) goto done;
/* Flush from LRU end if we are at capacity */
while(nclistlength(cache->mru) > cache->maxentries || cache->used > cache->maxsize) {
int i;
void* ptr;
NCZCacheEntry* e = ncxcachelast(cache->xcache); /* last entry is the least recently used */
if((stat = ncxcacheremove(cache->xcache,e->hashkey,&ptr))) goto done;
assert(e == ptr);
for(i=0;i<nclistlength(cache->mru);i++) {
e = nclistget(cache->mru,i);
if(ptr == e) break;
}
assert(e != NULL);
assert(i >= 0 && i < nclistlength(cache->mru));
nclistremove(cache->mru,i);
assert(cache->used >= e->size);
/* Note that |old chunk data| may not be same as |new chunk data| because of filters */
cache->used -= e->size; /* old size */
if(e->modified) /* flush to file */
stat=put_chunk(cache,e);
/* reclaim */
nullfree(e->data); nullfree(e->key.varkey); nullfree(e->key.chunkkey); nullfree(e);
}
#ifdef DEBUG
fprintf(stderr,"|cache.makeroom|=%ld\n",nclistlength(cache->mru));
#endif
done:
return stat;
}
int
NCZ_flush_chunk_cache(NCZChunkCache* cache)
{
int stat = NC_NOERR;
size_t i;
ZTRACE(4,"cache.var=%s |cache|=%d",cache->var->hdr.name,(int)nclistlength(cache->mru));
if(NCZ_cache_size(cache) == 0) goto done;
/* Iterate over the entries in hashmap */
for(i=0;i<nclistlength(cache->mru);i++) {
NCZCacheEntry* entry = nclistget(cache->mru,i);
if(entry->modified) {
/* Make cache used be consistent across filter application */
cache->used -= entry->size;
/* Write out this chunk in toto*/
if((stat=put_chunk(cache,entry)))
goto done;
cache->used += entry->size;
}
entry->modified = 0;
}
done:
return ZUNTRACE(stat);
}
/* Ensure existence of some kind of fill chunk */
int
NCZ_ensure_fill_chunk(NCZChunkCache* cache)
{
int i, stat = NC_NOERR;
NC_VAR_INFO_T* var = cache->var;
size_t typesize = var->type_info->size;
if(cache->fillchunk) goto done;
if((cache->fillchunk = malloc(cache->chunksize))==NULL)
{stat = NC_ENOMEM; goto done;}
if(var->no_fill) {
/* use zeros */
memset(cache->fillchunk,0,cache->chunksize);
goto done;
}
if((stat = NCZ_ensure_fill_value(var))) goto done;
switch (typesize) {
case 1: {
unsigned char c = *((unsigned char*)var->fill_value);
memset(cache->fillchunk,c,cache->chunksize);
} break;
case 2: {
unsigned short fv = *((unsigned short*)var->fill_value);
unsigned short* p2 = (unsigned short*)cache->fillchunk;
for(i=0;i<cache->chunksize;i+=typesize) *p2++ = fv;
} break;
case 4: {
unsigned int fv = *((unsigned int*)var->fill_value);
unsigned int* p4 = (unsigned int*)cache->fillchunk;
for(i=0;i<cache->chunksize;i+=typesize) *p4++ = fv;
} break;
case 8: {
unsigned long long fv = *((unsigned long long*)var->fill_value);
unsigned long long* p8 = (unsigned long long*)cache->fillchunk;
for(i=0;i<cache->chunksize;i+=typesize) *p8++ = fv;
} break;
default: {
unsigned char* p;
for(p=cache->fillchunk,i=0;i<cache->chunksize;i+=typesize,p+=typesize)
memcpy(p,var->fill_value,typesize);
} break;
}
done:
return NC_NOERR;
}
int
NCZ_reclaim_fill_chunk(NCZChunkCache* zcache)
{
int stat = NC_NOERR;
if(zcache && zcache->fillchunk) {
NC_VAR_INFO_T* var = zcache->var;
int ncid = var->container->nc4_info->controller->ext_ncid;
int tid = var->type_info->hdr.id;
size_t chunkcount = zcache->chunkcount;
stat = nc_reclaim_data_all(ncid,tid,zcache->fillchunk,chunkcount);
zcache->fillchunk = NULL;
}
return stat;
}
#if 0
int
NCZ_chunk_cache_modified(NCZChunkCache* cache, const size64_t* indices)
{
int stat = NC_NOERR;
char* key = NULL;
NCZCacheEntry* entry = NULL;
int rank = cache->ndims;
/* Create the key for this cache */
if((stat=NCZ_buildchunkkey(rank, indices, &key))) goto done;
/* See if already in cache */
if(NC_hashmapget(cache->mru, key, strlen(key), (uintptr_t*)entry)) { /* found */
entry->modified = 1;
}
done:
nullfree(key);
return THROW(stat);
}
#endif
/**************************************************/
/*
From Zarr V2 Specification:
"The compressed sequence of bytes for each chunk is stored under
a key formed from the index of the chunk within the grid of
chunks representing the array. To form a string key for a
chunk, the indices are converted to strings and concatenated
with the dimension_separator character ('.' or '/') separating
each index. For example, given an array with shape (10000,
10000) and chunk shape (1000, 1000) there will be 100 chunks
laid out in a 10 by 10 grid. The chunk with indices (0, 0)
provides data for rows 0-1000 and columns 0-1000 and is stored
under the key "0.0"; the chunk with indices (2, 4) provides data
for rows 2000-3000 and columns 4000-5000 and is stored under the
key "2.4"; etc."
*/
/**
* @param R Rank
* @param chunkindices The chunk indices
* @param dimsep the dimension separator
* @param keyp Return the chunk key string
*/
int
NCZ_buildchunkkey(size_t R, const size64_t* chunkindices, char dimsep, char** keyp)
{
int stat = NC_NOERR;
int r;
NCbytes* key = ncbytesnew();
if(keyp) *keyp = NULL;
assert(islegaldimsep(dimsep));
for(r=0;r<R;r++) {
char sindex[64];
if(r > 0) ncbytesappend(key,dimsep);
/* Print as decimal with no leading zeros */
snprintf(sindex,sizeof(sindex),"%lu",(unsigned long)chunkindices[r]);
ncbytescat(key,sindex);
}
ncbytesnull(key);
if(keyp) *keyp = ncbytesextract(key);
ncbytesfree(key);
return THROW(stat);
}
/**
* @internal Push data to chunk of a file.
* If chunk does not exist, create it
*
* @param file Pointer to file info struct.
* @param proj Chunk projection
* @param datalen size of data
* @param data Buffer containing the chunk data to write
*
* @return ::NC_NOERR No error.
* @author Dennis Heimbigner
*/
static int
put_chunk(NCZChunkCache* cache, NCZCacheEntry* entry)
{
int stat = NC_NOERR;
NC_FILE_INFO_T* file = NULL;
NCZ_FILE_INFO_T* zfile = NULL;
NCZMAP* map = NULL;
char* path = NULL;
ZTRACE(5,"cache.var=%s entry.key=%s",cache->var->hdr.name,entry->key);
LOG((3, "%s: var: %p", __func__, cache->var));
file = (cache->var->container)->nc4_info;
zfile = file->format_file_info;
map = zfile->map;
#ifdef ENABLE_NCZARR_FILTERS
/* Make sure the entry is in filtered state */
if(!entry->isfiltered) {
NC_VAR_INFO_T* var = cache->var;
void* filtered = NULL; /* pointer to the filtered data */
size_t flen; /* length of filtered data */
/* Get the filter chain to apply */
NClist* filterchain = (NClist*)var->filters;
if(nclistlength(filterchain) > 0) {
/* Apply the filter chain to get the filtered data; will reclaim entry->data */
if((stat = NCZ_applyfilterchain(file,var,filterchain,entry->size,entry->data,&flen,&filtered,ENCODING))) goto done;
/* Fix up the cache entry */
/* Note that if filtered is different from entry->data, then entry->data will have been freed */
entry->data = filtered;
entry->size = flen;
entry->isfiltered = 1;
}
}
#endif
path = NCZ_chunkpath(entry->key);
stat = nczmap_write(map,path,0,entry->size,entry->data);
nullfree(path); path = NULL;
switch(stat) {
case NC_NOERR:
break;
case NC_EEMPTY:
default: goto done;
}
done:
nullfree(path);
return ZUNTRACE(stat);
}
/**
* @internal Push data from memory to file.
*
* @param cache Pointer to parent cache
* @param key chunk key
* @param entry cache entry to read into
*
* @return ::NC_NOERR No error.
* @author Dennis Heimbigner
*/
static int
get_chunk(NCZChunkCache* cache, NCZCacheEntry* entry)
{
int stat = NC_NOERR;
NCZMAP* map = NULL;
NC_FILE_INFO_T* file = NULL;
NCZ_FILE_INFO_T* zfile = NULL;
size64_t size;
int empty = 0;
char* path = NULL;
ZTRACE(5,"cache.var=%s entry.key=%s sep=%d",cache->var->hdr.name,entry->key,cache->dimension_separator);
LOG((3, "%s: file: %p", __func__, file));
file = (cache->var->container)->nc4_info;
zfile = file->format_file_info;
map = zfile->map;
assert(map);
/* get size of the "raw" data on "disk" */
path = NCZ_chunkpath(entry->key);
stat = nczmap_len(map,path,&size);
nullfree(path); path = NULL;
switch(stat) {
case NC_NOERR: break;
case NC_EEMPTY: empty = 1; stat = NC_NOERR; break;
default: goto done;
}
if(!empty) {
/* Make sure we have a place to read it */
entry->size = size;
entry->isfiltered = FILTERED(cache); /* Is the data being read filtered? */
if((entry->data = (void*)malloc(entry->size)) == NULL)
{stat = NC_ENOMEM; goto done;}
/* Read the raw data */
path = NCZ_chunkpath(entry->key);
stat = nczmap_read(map,path,0,entry->size,(char*)entry->data);
nullfree(path); path = NULL;
switch (stat) {
case NC_NOERR: break;
case NC_EEMPTY: empty = 1; stat = NC_NOERR;break;
default: goto done;
}
}
if(empty) {
/* fake the chunk */
entry->modified = (file->no_write?0:1);
entry->size = cache->chunksize;
if((entry->data = (void*)malloc(entry->size)) == NULL)
{stat = NC_ENOMEM; goto done;}
/* apply fill value */
if(cache->fillchunk == NULL)
{if((stat = NCZ_ensure_fill_chunk(cache))) goto done;}
memcpy(entry->data,cache->fillchunk,entry->size);
entry->isfiltered = 0;
stat = NC_NOERR;
}
#ifdef ENABLE_NCZARR_FILTERS
/* Make sure the entry is in unfiltered state */
if(entry->isfiltered) {
NC_VAR_INFO_T* var = cache->var;
void* unfiltered = NULL; /* pointer to the unfiltered data */
void* filtered = NULL; /* pointer to the filtered data */
size_t unflen; /* length of unfiltered data */
/* Get the filter chain to apply */
NClist* filterchain = (NClist*)var->filters;
if(nclistlength(filterchain) == 0) {stat = NC_EFILTER; goto done;}
/* Apply the filter chain to get the unfiltered data */
filtered = entry->data;
entry->data = NULL;
if((stat = NCZ_applyfilterchain(file,var,filterchain,entry->size,filtered,&unflen,&unfiltered,!ENCODING))) goto done;
/* Fix up the cache entry */
entry->data = unfiltered;
entry->size = unflen;
entry->isfiltered = 0;
}
#endif
done:
nullfree(path);
return ZUNTRACE(stat);
}
int
NCZ_buildchunkpath(NCZChunkCache* cache, const size64_t* chunkindices, struct ChunkKey* key)
{
int stat = NC_NOERR;
char* chunkname = NULL;
char* varkey = NULL;
assert(key != NULL);
/* Get the chunk object name */
if((stat = NCZ_buildchunkkey(cache->ndims, chunkindices, cache->dimension_separator, &chunkname))) goto done;
/* Get the var object key */
if((stat = NCZ_varkey(cache->var,&varkey))) goto done;
key->varkey = varkey; varkey = NULL;
key->chunkkey = chunkname; chunkname = NULL;
done:
nullfree(chunkname);
nullfree(varkey);
return THROW(stat);
}
void
NCZ_dumpxcacheentry(NCZChunkCache* cache, NCZCacheEntry* e, NCbytes* buf)
{
char s[8192];
char idx[64];
int i;
ncbytescat(buf,"{");
snprintf(s,sizeof(s),"modified=%u isfiltered=%u indices=",
(unsigned)e->modified,
(unsigned)e->isfiltered
);
ncbytescat(buf,s);
for(i=0;i<cache->ndims;i++) {
snprintf(idx,sizeof(idx),"%s%llu",(i==0?"":"."),e->indices[i]);
ncbytescat(buf,idx);
}
snprintf(s,sizeof(s),"size=%llu data=%p",
e->size,
e->data
);
ncbytescat(buf,s);
ncbytescat(buf,"}");
}
void
NCZ_printxcache(NCZChunkCache* cache)
{
static char xs[20000];
NCbytes* buf = ncbytesnew();
char s[8192];
int i;
ncbytescat(buf,"NCZChunkCache:\n");
snprintf(s,sizeof(s),"\tvar=%s\n\tndims=%u\n\tchunksize=%u\n\tchunkcount=%u\n\tfillchunk=%p\n",
cache->var->hdr.name,
(unsigned)cache->ndims,
(unsigned)cache->chunksize,
(unsigned)cache->chunkcount,
cache->fillchunk
);
ncbytescat(buf,s);
snprintf(s,sizeof(s),"\tmaxentries=%u\n\tmaxsize=%u\n\tused=%u\n\tdimsep='%c'\n",
(unsigned)cache->maxentries,
(unsigned)cache->maxsize,
(unsigned)cache->used,
cache->dimension_separator
);
ncbytescat(buf,s);
snprintf(s,sizeof(s),"\tmru: (%u)\n",(unsigned)nclistlength(cache->mru));
ncbytescat(buf,s);
if(nclistlength(cache->mru)==0)
ncbytescat(buf,"\t\t<empty>\n");
for(i=0;i<nclistlength(cache->mru);i++) {
NCZCacheEntry* e = (NCZCacheEntry*)nclistget(cache->mru,i);
snprintf(s,sizeof(s),"\t\t[%d] ",i);
ncbytescat(buf,s);
if(e == NULL)
ncbytescat(buf,"<null>");
else
NCZ_dumpxcacheentry(cache, e, buf);
ncbytescat(buf,"\n");
}
xs[0] = '\0';
strlcat(xs,ncbytescontents(buf),sizeof(xs));
ncbytesfree(buf);
fprintf(stderr,"%s\n",xs);
// return xs;
}