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288 lines
12 KiB
C
288 lines
12 KiB
C
/* This is part of the netCDF package. Copyright 2005-2011 University
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Corporation for Atmospheric Research/Unidata See COPYRIGHT file for
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conditions of use.
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Test HDF5 file code. These are not intended to be exhaustive tests,
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but they use HDF5 the same way that netCDF-4 does, so if these
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tests don't work, than netCDF-4 won't work either.
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*/
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#include "h5_err_macros.h"
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#include <hdf5.h>
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#include <H5DSpublic.h>
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#include <ncdimscale.h>
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#define FILE_NAME "tst_h_dimscales4.h5"
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#define DIMSCALE_NAME "AAA_dimscale"
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#define VAR1_NAME "Watson"
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#define VAR2_NAME "Holmes"
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#define VAR3_NAME "Moriarty"
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#define NDIMS 1
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#define DIM_LEN 1
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#define NAME_ATTRIBUTE "dimscale_name_attribute"
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#define DIMSCALE_LABEL "dimscale_label"
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#define STR_LEN 255
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#define NC_MAX_NAME STR_LEN
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#define NC_EHDFERR 255
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#define DIM_WITHOUT_VARIABLE "This is a netCDF dimension but not a netCDF variable."
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/* typedef struct { */
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/* unsigned long fileno; /\*file number *\/ */
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/* haddr_t objno; /\*object number *\/ */
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/* } HDF5_OBJID_T; */
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struct nc_hdf5_link_info
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{
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char name[STR_LEN];
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H5I_type_t obj_type;
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};
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static herr_t
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visit_link(hid_t g_id, const char *name, const H5L_info_t *info,
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void *op_data)
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{
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/* A positive return value causes the visit iterator to immediately
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* return that positive value, indicating short-circuit
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* success. The iterator can be restarted at the next group
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* member. */
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int ret = 1;
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hid_t id;
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strncpy(((struct nc_hdf5_link_info *)op_data)->name, name, NC_MAX_NAME);
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/* Open this critter. */
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if ((id = H5Oopen_by_addr(g_id, info->u.address)) < 0)
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return NC_EHDFERR;
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/* Is this critter a group, type, data, attribute, or what? */
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if ((((struct nc_hdf5_link_info *)op_data)->obj_type = H5Iget_type(id)) < 0)
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ret = NC_EHDFERR;
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/* Close the critter to release resouces. */
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if (H5Oclose(id) < 0)
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return NC_EHDFERR;
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return ret;
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}
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herr_t alien_visitor(hid_t did, unsigned dim, hid_t dsid,
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void *visitor_data)
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{
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char name1[STR_LEN];
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H5G_stat_t statbuf;
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HDF5_OBJID_T *objid = visitor_data;
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/* This should get "/var1", the name of the dataset that the scale
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* is attached to. */
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/*if (H5Iget_name(did, name1, STR_LEN) < 0) ERR;*/
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/* printf("visiting did 0x%x dim %d dsid 0x%x name of did %s \n",
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did, dim, dsid, name1);*/
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/* Get more info on the dimscale object.*/
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if (H5Gget_objinfo(dsid, ".", 1, &statbuf) < 0) ERR;
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objid->fileno[0] = statbuf.fileno[0];
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objid->objno[0] = statbuf.objno[0];
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objid->fileno[1] = statbuf.fileno[1];
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objid->objno[1] = statbuf.objno[1];
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/* printf("for dsid: statbuf.fileno = %d statbuf.objno = %d\n",
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statbuf.fileno, statbuf.objno);*/
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if (H5Gget_objinfo(did, ".", 1, &statbuf) < 0) ERR;
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/* printf("for did: statbuf.fileno = %d statbuf.objno = %d\n",
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statbuf.fileno, statbuf.objno);*/
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return 0;
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}
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int
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main()
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{
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printf("\n*** Checking HDF5 dimscales detach.\n");
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printf("*** Creating a file with two vars with one dimension scale...");
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{
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hid_t fileid, grpid, spaceid, var1_id, var2_id, dimscaleid, cparmsid;
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hid_t fcpl_id, fapl_id, create_propid, access_propid;
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hsize_t dims[NDIMS] = {DIM_LEN};
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char dimscale_wo_var[STR_LEN];
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float data = 42;
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/* Create file. */
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if ((fapl_id = H5Pcreate(H5P_FILE_ACCESS)) < 0) ERR;
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if (H5Pset_fclose_degree(fapl_id, H5F_CLOSE_STRONG)) ERR;
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if (H5Pset_cache(fapl_id, 0, CHUNK_CACHE_NELEMS, CHUNK_CACHE_SIZE,
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CHUNK_CACHE_PREEMPTION) < 0) ERR;
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if (H5Pset_libver_bounds(fapl_id, H5F_LIBVER_18, H5F_LIBVER_18) < 0) ERR;
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if ((fcpl_id = H5Pcreate(H5P_FILE_CREATE)) < 0) ERR;
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if (H5Pset_link_creation_order(fcpl_id, (H5P_CRT_ORDER_TRACKED |
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H5P_CRT_ORDER_INDEXED)) < 0) ERR;
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if (H5Pset_attr_creation_order(fcpl_id, (H5P_CRT_ORDER_TRACKED |
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H5P_CRT_ORDER_INDEXED)) < 0) ERR;
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if ((fileid = H5Fcreate(FILE_NAME, H5F_ACC_TRUNC, fcpl_id, fapl_id)) < 0) ERR;
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if (H5Pclose(fapl_id) < 0) ERR;
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if (H5Pclose(fcpl_id) < 0) ERR;
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if ((grpid = H5Gopen2(fileid, "/", H5P_DEFAULT)) < 0) ERR;
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/* Create dimension scale. */
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if ((create_propid = H5Pcreate(H5P_DATASET_CREATE)) < 0) ERR;
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if (H5Pset_attr_creation_order(create_propid, H5P_CRT_ORDER_TRACKED|
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H5P_CRT_ORDER_INDEXED) < 0) ERR;
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if ((spaceid = H5Screate_simple(1, dims, dims)) < 0) ERR;
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if ((dimscaleid = H5Dcreate1(grpid, DIMSCALE_NAME, H5T_IEEE_F32BE,
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spaceid, create_propid)) < 0) ERR;
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if (H5Sclose(spaceid) < 0) ERR;
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if (H5Pclose(create_propid) < 0) ERR;
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sprintf(dimscale_wo_var, "%s%10d", DIM_WITHOUT_VARIABLE, DIM_LEN);
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if (H5DSset_scale(dimscaleid, dimscale_wo_var) < 0) ERR;
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/* Create a variable that uses this dimension scale. */
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if ((access_propid = H5Pcreate(H5P_DATASET_ACCESS)) < 0) ERR;
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if (H5Pset_chunk_cache(access_propid, CHUNK_CACHE_NELEMS,
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CHUNK_CACHE_SIZE, CHUNK_CACHE_PREEMPTION) < 0) ERR;
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if ((create_propid = H5Pcreate(H5P_DATASET_CREATE)) < 0) ERR;
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if (H5Pset_fill_value(create_propid, H5T_NATIVE_FLOAT, &data) < 0) ERR;
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if (H5Pset_layout(create_propid, H5D_CONTIGUOUS) < 0) ERR;
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if (H5Pset_attr_creation_order(create_propid, H5P_CRT_ORDER_TRACKED|
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H5P_CRT_ORDER_INDEXED) < 0) ERR;
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if ((spaceid = H5Screate_simple(NDIMS, dims, dims)) < 0) ERR;
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if ((var1_id = H5Dcreate2(grpid, VAR1_NAME, H5T_NATIVE_FLOAT, spaceid,
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H5P_DEFAULT, create_propid, access_propid)) < 0) ERR;
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if (H5Pclose(create_propid) < 0) ERR;
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if (H5Pclose(access_propid) < 0) ERR;
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if (H5Sclose(spaceid) < 0) ERR;
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if (H5DSattach_scale(var1_id, dimscaleid, 0) < 0) ERR;
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/* Create another variable that uses this dimension scale. */
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if ((access_propid = H5Pcreate(H5P_DATASET_ACCESS)) < 0) ERR;
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if (H5Pset_chunk_cache(access_propid, CHUNK_CACHE_NELEMS,
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CHUNK_CACHE_SIZE, CHUNK_CACHE_PREEMPTION) < 0) ERR;
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if ((create_propid = H5Pcreate(H5P_DATASET_CREATE)) < 0) ERR;
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if (H5Pset_fill_value(create_propid, H5T_NATIVE_FLOAT, &data) < 0) ERR;
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if (H5Pset_layout(create_propid, H5D_CONTIGUOUS) < 0) ERR;
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if (H5Pset_attr_creation_order(create_propid, H5P_CRT_ORDER_TRACKED|
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H5P_CRT_ORDER_INDEXED) < 0) ERR;
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if ((spaceid = H5Screate_simple(NDIMS, dims, dims)) < 0) ERR;
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if ((var2_id = H5Dcreate2(grpid, VAR2_NAME, H5T_NATIVE_FLOAT, spaceid,
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H5P_DEFAULT, create_propid, access_propid)) < 0) ERR;
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if (H5Pclose(create_propid) < 0) ERR;
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if (H5Pclose(access_propid) < 0) ERR;
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if (H5Sclose(spaceid) < 0) ERR;
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if (H5DSattach_scale(var2_id, dimscaleid, 0) < 0) ERR;
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/* Now detach the scales and remove the dimscale. This doesn't
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* work if I reverse the order of the statements. */
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if (H5DSdetach_scale(var2_id, dimscaleid, 0) < 0) ERR;
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if (H5DSdetach_scale(var1_id, dimscaleid, 0) < 0) ERR;
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/* Fold up our tents. */
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if (H5Dclose(var1_id) < 0) ERR;
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if (H5Dclose(dimscaleid) < 0) ERR;
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if (H5Gclose(grpid) < 0) ERR;
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if (H5Fclose(fileid) < 0) ERR;
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/* /\* Now read the file and check it. *\/ */
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/* { */
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/* hid_t fileid, spaceid = 0, datasetid = 0; */
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/* hsize_t num_obj, i; */
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/* int obj_class; */
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/* char obj_name[STR_LEN + 1]; */
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/* char dimscale_name[STR_LEN+1]; */
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/* htri_t is_scale; */
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/* char label[STR_LEN+1]; */
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/* int num_scales; */
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/* hsize_t dims[1], maxdims[1]; */
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/* H5G_stat_t statbuf; */
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/* HDF5_OBJID_T dimscale_obj, vars_dimscale_obj; */
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/* struct nc_hdf5_link_info link_info; */
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/* hsize_t idx = 0; */
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/* /\* Open the file. *\/ */
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/* if ((fileid = H5Fopen(FILE_NAME, H5F_ACC_RDWR, H5P_DEFAULT)) < 0) ERR; */
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/* if ((grpid = H5Gopen2(fileid, "/", H5P_DEFAULT)) < 0) ERR; */
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/* /\* Loop through objects in the root group. *\/ */
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/* if (H5Gget_num_objs(fileid, &num_obj) < 0) ERR; */
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/* for (i = 0; i < num_obj; i++) */
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/* { */
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/* if (H5Literate(grpid, H5_INDEX_CRT_ORDER, H5_ITER_INC, */
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/* &idx, visit_link, (void *)&link_info) < 0) ERR; */
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/* printf("Encountered: HDF5 object link_info.name %s\n", link_info.name); */
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/* /\* Deal with object based on its obj_class. *\/ */
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/* switch(link_info.obj_type) */
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/* { */
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/* case H5I_GROUP: */
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/* break; */
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/* case H5I_DATASET: */
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/* /\* Open the dataset. *\/ */
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/* if ((datasetid = H5Dopen1(fileid, link_info.name)) < 0) ERR; */
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/* if ((spaceid = H5Dget_space(datasetid)) < 0) ERR; */
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/* if (H5Sget_simple_extent_dims(spaceid, dims, maxdims) < 0) ERR; */
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/* if (maxdims[0] != DIM_LEN) ERR; */
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/* if (H5Sclose(spaceid) < 0) ERR; */
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/* /\* Is this a dimscale? *\/ */
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/* if ((is_scale = H5DSis_scale(datasetid)) < 0) ERR; */
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/* if (is_scale && strcmp(link_info.name, DIMSCALE_NAME)) ERR; */
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/* if (is_scale) */
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/* { */
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/* /\* A dimscale comes with a NAME attribute, in */
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/* * addition to its real name. *\/ */
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/* if (H5DSget_scale_name(datasetid, dimscale_name, STR_LEN) < 0) ERR; */
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/* if (strcmp(dimscale_name, dimscale_wo_var)) ERR; */
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/* /\* fileno and objno uniquely identify an object and a */
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/* * HDF5 file. *\/ */
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/* if (H5Gget_objinfo(datasetid, ".", 1, &statbuf) < 0) ERR; */
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/* dimscale_obj.fileno[0] = statbuf.fileno[0]; */
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/* dimscale_obj.objno[0] = statbuf.objno[0]; */
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/* dimscale_obj.fileno[1] = statbuf.fileno[1]; */
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/* dimscale_obj.objno[1] = statbuf.objno[1]; */
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/* /\*printf("scale statbuf.fileno = %d statbuf.objno = %d\n", */
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/* statbuf.fileno, statbuf.objno);*\/ */
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/* } */
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/* else */
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/* { */
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/* /\* Here's how to get the number of scales attached */
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/* * to the dataset's dimension 0. *\/ */
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/* if ((num_scales = H5DSget_num_scales(datasetid, 0)) < 0) ERR; */
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/* if (num_scales != 1) ERR; */
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/* /\* Go through all dimscales for this var and learn about them. *\/ */
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/* if (H5DSiterate_scales(datasetid, 0, NULL, alien_visitor, */
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/* &vars_dimscale_obj) < 0) ERR; */
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/* /\*printf("vars_dimscale_obj.fileno = %d vars_dimscale_obj.objno = %d\n", */
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/* vars_dimscale_obj.fileno, vars_dimscale_obj.objno);*\/ */
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/* /\* if (vars_dimscale_obj.fileno[0] != dimscale_obj.fileno[0] || *\/ */
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/* /\* vars_dimscale_obj.objno[0] != dimscale_obj.objno[0] || *\/ */
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/* /\* vars_dimscale_obj.fileno[1] != dimscale_obj.fileno[1] || *\/ */
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/* /\* vars_dimscale_obj.objno[1] != dimscale_obj.objno[1]) ERR; *\/ */
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/* /\* There's also a label for dimension 0. *\/ */
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/* if (H5DSget_label(datasetid, 0, label, STR_LEN) < 0) ERR; */
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/* /\*printf("found non-scale dataset %s, label %s\n", link_info.name, label);*\/ */
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/* } */
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/* if (H5Dclose(datasetid) < 0) ERR; */
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/* break; */
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/* case H5I_DATATYPE: */
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/* break; */
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/* default: */
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/* printf("Unknown object!"); */
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/* ERR; */
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/* } */
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/* } */
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/* /\* Close up the shop. *\/ */
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/* if (H5Fclose(fileid) < 0) ERR; */
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/* }*/
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}
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SUMMARIZE_ERR;
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FINAL_RESULTS;
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}
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