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https://github.com/Unidata/netcdf-c.git
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d07c05b58f
re: issue https://github.com/Unidata/netcdf-c/issues/1156 Starting with HDF5 version 1.10.x, the plugin code MUST be careful when using the standard *malloc()*, *realloc()*, and *free()* function. In the event that the code is allocating, reallocating, or free'ing memory that either came from -- or will be exported to -- the calling HDF5 library, then one MUST use the corresponding HDF5 functions *H5allocate_memory()*, *H5resize_memory()*, *H5free_memory()* [5] to avoid memory failures. Additionally, if your filter code leaks memory, then the HDF5 library generates a failure something like this. ```` H5MM.c:232: H5MM_final_sanity_check: Assertion `0 == H5MM_curr_alloc_bytes_s' failed. ```` This PR modifies the code in the plugins directory to conform to these new requirements. This raises a question about the libhdf5 code where this same problem may occur. We need to scan especially nc4hdf.c to look for this problem.
272 lines
6.8 KiB
C
272 lines
6.8 KiB
C
#include <stdlib.h>
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#include <string.h>
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#include <assert.h>
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#include <stdio.h>
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#include <sys/types.h>
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#include <hdf5.h>
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/* Older versions of the hdf library may define H5PL_type_t here */
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#include <H5PLextern.h>
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#ifndef DLL_EXPORT
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#define DLL_EXPORT
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#endif
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/* WARNING:
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Starting with HDF5 version 1.10.x, the plugin code MUST be
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careful when using the standard *malloc()*, *realloc()*, and
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*free()* function.
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In the event that the code is allocating, reallocating, for
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free'ing memory that either came from or will be exported to the
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calling HDF5 library, then one MUST use the corresponding HDF5
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functions *H5allocate_memory()*, *H5resize_memory()*,
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*H5free_memory()* [5] to avoid memory failures.
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Additionally, if your filter code leaks memory, then the HDF5 library
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will generate an error.
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*/
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#include "h5misc.h"
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#undef DEBUG
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/* The C standard apparently defines all floating point constants as double;
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we rely on that in this code.
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*/
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#define DBLVAL 12345678.12345678
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static int paramcheck(size_t nparams, const unsigned int* params);
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static void byteswap8(unsigned char* mem);
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static void mismatch(size_t i, const char* which);
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const H5Z_class2_t H5Z_TEST[1] = {{
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H5Z_CLASS_T_VERS, /* H5Z_class_t version */
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(H5Z_filter_t)(H5Z_FILTER_TEST), /* Filter id number */
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1, /* encoder_present flag (set to true) */
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1, /* decoder_present flag (set to true) */
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"test", /* Filter name for debugging */
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(H5Z_can_apply_func_t)H5Z_test_can_apply, /* The "can apply" callback */
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NULL, /* The "set local" callback */
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(H5Z_func_t)H5Z_filter_test, /* The actual filter function */
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}};
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/* External Discovery Functions */
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H5PL_type_t
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H5PLget_plugin_type(void)
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{
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return H5PL_TYPE_FILTER;
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}
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const void*
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H5PLget_plugin_info(void)
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{
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return H5Z_TEST;
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}
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/* Make this explicit */
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/*
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* The "can_apply" callback returns positive a valid combination, zero for an
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* invalid combination and negative for an error.
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*/
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htri_t
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H5Z_test_can_apply(hid_t dcpl_id, hid_t type_id, hid_t space_id)
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{
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return 1; /* Assume it can always apply */
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}
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/*
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This filter does some verification
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that the parameters passed to the filter
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are correct. Specifically, that endian-ness
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is correct. As a filter, it is the identify
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function, passing input to output unchanged.
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Test cases format:
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1.The first param is the test index i.e. which test to execute.
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2. The remaining parameters are those for the test chosen in #1
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*/
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size_t
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H5Z_filter_test(unsigned int flags, size_t cd_nelmts,
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const unsigned int cd_values[], size_t nbytes,
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size_t *buf_size, void **buf)
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{
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void* newbuf;
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unsigned int testcase = 0;
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if(cd_nelmts == 0)
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goto fail;
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testcase = cd_values[0];
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if(testcase == TC_ENDIAN) {
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if(!paramcheck(cd_nelmts,cd_values))
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goto fail;
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}
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if (flags & H5Z_FLAG_REVERSE) {
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/* Replace buffer */
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newbuf = H5allocate_memory(*buf_size,0);
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if(newbuf == NULL) abort();
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memcpy(newbuf,*buf,*buf_size);
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/* reclaim old buffer */
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H5free_memory(*buf);
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*buf = newbuf;
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} else {
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/* Replace buffer */
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newbuf = H5allocate_memory(*buf_size,0);
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if(newbuf == NULL) abort();
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memcpy(newbuf,*buf,*buf_size);
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/* reclaim old buffer */
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H5free_memory(*buf);
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*buf = newbuf;
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}
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return *buf_size;
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fail:
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return 0;
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}
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static int
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paramcheck(size_t nparams, const unsigned int* params)
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{
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size_t i;
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/* Test endianness of this machine */
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const unsigned char b[4] = {0x0,0x0,0x0,0x1}; /* value 1 in big-endian*/
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int bigendian = (1 == *(unsigned int*)b); /* 1=>big 0=>little*/
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if(nparams != 14) {
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fprintf(stderr,"Too few parameters: need=16 sent=%ld\n",(unsigned long)nparams);
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goto fail;
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}
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for(i=0;i<nparams;i++) {
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unsigned int ival;
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unsigned long long lval;
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float fval;
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double dval;
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switch (i) {
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case 0: break; /* this is the testcase # */
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case 1:
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ival = (-17) & 0xff;
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if(ival != (signed int)(params[i]))
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{mismatch(i,"signed byte"); goto fail; };
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break;
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case 2:
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ival = 23;
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if(ival != (unsigned int)(params[i]))
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{mismatch(i,"unsigned byte"); goto fail; };
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break;
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case 3:
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ival = (-25) & 0xffff;
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if(ival != (signed int)(params[i]))
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{mismatch(i,"signed short"); goto fail; };
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break;
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case 4:
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ival = 27;
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if(ival != (unsigned int)(params[i]))
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{mismatch(i,"unsigned short"); goto fail; };
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break;
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case 5:
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ival = 77;
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if(ival != (signed int)(params[i]))
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{mismatch(i,"signed int"); goto fail; };
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break;
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case 6:
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ival = 93u;
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if(ival != (unsigned int)(params[i]))
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{mismatch(i,"unsigned int"); goto fail; };
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break;
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case 7:
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fval = 789.0f;
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if(fval != *(float*)(¶ms[i]))
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{mismatch(i,"float"); goto fail; };
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break;
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case 8: {/*double*/
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double x = *(double*)¶ms[i];
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dval = DBLVAL;
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i++; /* takes two parameters */
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if(bigendian)
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byteswap8((unsigned char*)&x);
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if(dval != x) {
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mismatch(i,"double");
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goto fail;
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}
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}; break;
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case 10: {/*signed long long*/
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signed long long x = *(signed long long*)¶ms[i];
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lval = -9223372036854775807L;
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i++; /* takes two parameters */
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if(bigendian)
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byteswap8((unsigned char*)&x);
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if(lval != x) {
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mismatch(i,"signed long long");
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goto fail;
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}
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}; break;
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case 12: {/*unsigned long long*/
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unsigned long long x = *(unsigned long long*)¶ms[i];
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lval = 18446744073709551615UL;
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i++; /* takes two parameters */
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if(bigendian)
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byteswap8((unsigned char*)&x);
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if(lval != x) {
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mismatch(i,"unsigned long long");
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goto fail;
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}
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}; break;
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default:
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mismatch(i,"unexpected parameter");
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goto fail;
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break;
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}
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}
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#ifdef DEBUG
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{
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size_t i;
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fprintf(stderr,"bigendian=%d nparams=%d params=\n",bigendian,nparams);
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for(i=0;i<nparams;i++) {
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fprintf(stderr,"[%d] %ud %d %f\n", (unsigned int)i, params[i],(signed int)params[i],*(float*)¶ms[i]);
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}
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fflush(stderr);
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}
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#endif
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return 1;
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fail:
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return 0;
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}
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static void
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byteswap8(unsigned char* mem)
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{
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unsigned char c;
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c = mem[0];
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mem[0] = mem[7];
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mem[7] = c;
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c = mem[1];
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mem[1] = mem[6];
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mem[6] = c;
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c = mem[2];
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mem[2] = mem[5];
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mem[5] = c;
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c = mem[3];
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mem[3] = mem[4];
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mem[4] = c;
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}
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static void
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mismatch(size_t i, const char* which)
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{
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fprintf(stderr,"mismatch: [%ld] %s\n",(unsigned long)i,which);
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fflush(stderr);
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}
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