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netcdf-c/ncdump
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Dennis Heimbigner 84c69afca7 Allow redefinition of variable filters 
re: Github issue https://github.com/Unidata/netcdf-c/issues/1713

If nc_def_var_filter or nc_def_var_deflate or nc_def_var_szip is
called multiple times with the same filter id, but possibly with
different sets of parameters, then the first invocation is
sticky and later invocations are ignored. The desired behavior
is to have the last invocation be used.

This PR implements that desired behavior, with some special
cases.  If you call nc_def_var_deflate multiple times, then the
last invocation rule applies with respect to deflate. However,
the shuffle filter, if enabled, is always applied just before
applying deflate.

Misc unrelated changes:
1. Make client-side filters be disabled by default
2. Fix the definition of uintptr_t and use in oc2 and libdap4
3. Add some test cases
4. modify filter order tests to use plugin filters rather
   than client-side filters
2020-05-11 09:42:31 -06:00
..
cdl Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
expected ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
bom.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
cdl.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
chunkspec.c Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
chunkspec.h Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
CMakeLists.txt Syntax fix 2020-03-11 12:58:56 -06:00
depend
dimmap.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
dimmap.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
dumplib.c Spelling fixes 2019-09-18 08:03:01 -06:00
dumplib.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
env
indent.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
indent.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
inttags4.cdl re: gihub issue https://github.com/Unidata/netcdf-c/issues/380 2017-03-24 18:56:14 -06:00
inttags.cdl ckp 2015-11-19 13:44:55 -07:00
isnan.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
L512.bin re e-support UBS-599337 2017-10-24 16:25:09 -06:00
list.c Extend nccopy -F option syntax. 2019-02-08 18:48:17 -07:00
list.h Extend nccopy -F option syntax. 2019-02-08 18:48:17 -07:00
Makefile.am Allow redefinition of variable filters 2020-05-11 09:42:31 -06:00
nc4print.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
nccomps.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
nccopy.1 Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
nccopy.c ckp 2020-04-29 14:34:30 -06:00
ncdump.1 Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
ncdump.c Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
ncdump.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
nciter.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
nciter.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
nctime0.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
nctime0.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
nctrunc.c Remove netcdf-4 conditional on the dispatch table. 2019-07-20 13:59:40 -06:00
ncvalidator.c Corrected a potential unix API error. 2019-10-24 13:54:38 -06:00
ocprint.c Change (again), and hopefully simplify, the file model inference algorithm. 2019-09-29 12:59:28 -06:00
ref1.ncml Fix github issue: https://github.com/Unidata/netcdf-c/issues/236 2016-03-17 22:05:46 -06:00
ref_ctest1_nc4.cdl Wiring in more validation 2016-11-18 11:53:53 -07:00
ref_ctest1_nc4c.cdl
ref_ctest64.c different attempt to deal with ncdump dependencies 2017-11-11 17:33:51 -07:00
ref_ctest_small_3.c Add test cases 2019-11-03 12:03:13 -07:00
ref_ctest_small_4.c Add test cases 2019-11-03 12:03:13 -07:00
ref_ctest_special_atts_4.c Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
ref_ctest.c another attempt at reducing ncdump dependencies 2017-11-11 16:45:03 -07:00
ref_inttags4.cdl Working on getting cdf5 tests running. 2017-09-15 18:00:28 -06:00
ref_inttags.cdl ckp 2015-11-19 13:44:55 -07:00
ref_nc_test_netcdf4_4_0.nc
ref_nc_test_netcdf4.cdl
ref_nccopy3_subset.nc Wiring new test into autotools. 2017-09-01 11:57:28 -06:00
ref_nccopy_w.cdl Fix nccopy to use NC_PERSIST so that -w actually persists the output. 2019-03-15 12:05:27 -06:00
ref_no_ncproperty.nc Simplify libhdf5/nc5info.c to move to lazy parsing 2019-03-09 20:35:57 -07:00
ref_null_byte_padding_test.nc Wiring in a quick test. 2017-11-20 13:52:06 -07:00
ref_provenance_v1.nc There was a request to extend the provenance information 2018-08-25 21:44:41 -06:00
ref_test_360_day_1900.cdl Solve issue https://github.com/Unidata/netcdf-c/issues/359 2017-07-25 11:58:34 -06:00
ref_test_360_day_1900.nc Makefile.am cleanup 2017-11-18 14:20:04 -07:00
ref_test_365_day_1900.cdl Solve issue https://github.com/Unidata/netcdf-c/issues/359 2017-07-25 11:58:34 -06:00
ref_test_365_day_1900.nc Makefile.am cleanup 2017-11-18 14:20:04 -07:00
ref_test_366_day_1900.cdl Solve issue https://github.com/Unidata/netcdf-c/issues/359 2017-07-25 11:58:34 -06:00
ref_test_366_day_1900.nc Makefile.am cleanup 2017-11-18 14:20:04 -07:00
ref_test_corrupt_magic.nc re e-support UBS-599337 2017-10-24 16:25:09 -06:00
ref_times.cdl
ref_tst_charfill.cdl
ref_tst_comp2.cdl
ref_tst_comp.cdl
ref_tst_compounds2.cdl
ref_tst_compounds2.nc
ref_tst_compounds3.cdl
ref_tst_compounds3.nc
ref_tst_compounds4.cdl
ref_tst_compounds4.nc
ref_tst_enum_data.cdl
ref_tst_fillbug.cdl
ref_tst_format_att_64.cdl
ref_tst_format_att.cdl
ref_tst_group_data_v23.cdl
ref_tst_group_data.cdl
ref_tst_grp_spec0.cdl
ref_tst_grp_spec.cdl
ref_tst_irish_rover.nc tests for ncdump issue with irish rover 2018-05-15 08:09:52 -06:00
ref_tst_mud4_chars.cdl
ref_tst_mud4-bc.cdl
ref_tst_mud4.cdl
ref_tst_nans.cdl
ref_tst_nc4_utf8_4.cdl Work towards parallel testing via cmake. 2017-11-22 12:10:58 -07:00
ref_tst_ncf213.cdl There was a request to extend the provenance information 2018-08-25 21:44:41 -06:00
ref_tst_noncoord.cdl
ref_tst_opaque_data.cdl
ref_tst_radix.cdl Fix ncgen handling of octal constants (with leading 0). 2019-02-25 20:57:23 -07:00
ref_tst_small.cdl
ref_tst_solar_1.cdl ckp 2015-11-19 13:44:55 -07:00
ref_tst_solar_2.cdl
ref_tst_special_atts3.cdl
ref_tst_special_atts.cdl Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
ref_tst_string_data.cdl
ref_tst_unicode.cdl
ref_tst_utf8_4.cdl
ref_tst_utf8.cdl
ref_tst_vlen_data2.cdl
ref_tst_vlen_data.cdl
rewrite-scalar.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
run_back_comp_tests.sh Primary change: add dap4 support 2017-03-08 17:01:10 -07:00
run_ncgen_nc4_tests.sh Fix more memory leaks in netcdf-c library 2018-11-15 10:00:38 -07:00
run_ncgen_tests.sh replace USE_CDF5 with ENABLE_CDF5 2018-06-29 21:17:07 -05:00
run_tests.sh clean up 2019-03-12 09:54:16 -06:00
run_utf8_nc4_tests.sh eliminated dependencies 2017-11-25 05:18:04 -07:00
run_utf8_tests.sh eliminated dependencies 2017-11-25 05:18:04 -07:00
small2.cdl
small.cdl
test0.cdl
test_corrupt_magic.cdl re e-support UBS-599337 2017-10-24 16:25:09 -06:00
test_radix.sh Fix ncgen handling of octal constants (with leading 0). 2019-02-25 20:57:23 -07:00
test_unicode_directory.sh Permissions error on unicode directory test script. 2020-03-11 13:19:01 -06:00
tst_64bit.sh replace USE_CDF5 with ENABLE_CDF5 2018-06-29 21:17:07 -05:00
tst_bom.sh Primary change: add dap4 support 2017-03-08 17:01:10 -07:00
tst_brecs.cdl
tst_bug321.cdl
tst_calendars.cdl
tst_calendars.sh Makefile.am cleanup 2017-11-18 14:20:04 -07:00
tst_charfill.cdl
tst_charfill.sh Primary change: add dap4 support 2017-03-08 17:01:10 -07:00
tst_chunking.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_comp2.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_comp.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_compress.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_create_files.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_ctests.sh Add test cases 2019-11-03 12:03:13 -07:00
tst_dimsizes.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_dimsizes.sh make -j working for classic only in ncdump 2017-11-17 08:22:49 -07:00
tst_enum_data.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_fileinfo.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_fileinfo.sh Simplify libhdf5/nc5info.c to move to lazy parsing 2019-03-09 20:35:57 -07:00
tst_fillbug.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_fillbug.sh move C program invokations to scripts to clean up dependencies in build 2017-11-16 13:03:35 -07:00
tst_formatx3.sh replace USE_CDF5 with ENABLE_CDF5 2018-06-29 21:17:07 -05:00
tst_formatx4.sh make -j working for classic only in ncdump 2017-11-17 08:22:49 -07:00
tst_group_data.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_grp_spec.sh Primary change: add dap4 support 2017-03-08 17:01:10 -07:00
tst_h_rdc0.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_h_scalar.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_h_scalar.sh move C program invokations to scripts to clean up dependencies in build 2017-11-16 13:03:35 -07:00
tst_hdf5_offset.sh Swapped /bin/bash for /bin/sh to test on osx. 2018-08-12 23:01:08 -06:00
tst_inmemory_nc3.sh make -j working for classic only in ncdump 2017-11-17 08:22:49 -07:00
tst_inmemory_nc4.sh make -j working for classic only in ncdump 2017-11-17 08:22:49 -07:00
tst_inttags4.sh Working on getting cdf5 tests running. 2017-09-15 18:00:28 -06:00
tst_inttags.sh Primary change: add dap4 support 2017-03-08 17:01:10 -07:00
tst_iter.sh Primary change: add dap4 support 2017-03-08 17:01:10 -07:00
tst_lengths.sh replace USE_CDF5 with ENABLE_CDF5 2018-06-29 21:17:07 -05:00
tst_mslp.cdl
tst_mud.sh Primary change: add dap4 support 2017-03-08 17:01:10 -07:00
tst_nans.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_nccopy3_subset.sh Swapped /bin/bash for /bin/sh to test on osx. 2018-08-12 23:01:08 -06:00
tst_nccopy3.sh There was a request to extend the provenance information 2018-08-25 21:44:41 -06:00
tst_nccopy4.sh Fix more memory leaks in netcdf-c library 2018-11-15 10:00:38 -07:00
tst_nccopy5.sh Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
tst_nccopy_w3.sh Fix nccopy to use NC_PERSIST so that -w actually persists the output. 2019-03-15 12:05:27 -06:00
tst_nccopy_w4.sh Fix nccopy to use NC_PERSIST so that -w actually persists the output. 2019-03-15 12:05:27 -06:00
tst_ncgen4_classic.sh The ncdap_tests were a mess, so I decided to clean them up 2018-03-20 21:31:31 -06:00
tst_ncgen4_cycle.sh removed many dependencies in ncdump testing 2017-11-25 07:28:07 -07:00
tst_ncgen4_diff.sh removed many dependencies in ncdump testing 2017-11-25 07:28:07 -07:00
tst_ncgen4.sh Swapped /bin/bash for /bin/sh to test on osx. 2018-08-12 23:01:08 -06:00
tst_ncgen_shared.sh Fix more memory leaks in netcdf-c library 2018-11-15 10:00:38 -07:00
tst_ncml.cdl Fix github issue: https://github.com/Unidata/netcdf-c/issues/236 2016-03-17 22:05:46 -06:00
tst_netcdf4_4.sh move cleanup to makefile 2018-11-18 13:43:49 -07:00
tst_netcdf4.sh Fix more memory leaks in netcdf-c library 2018-11-15 10:00:38 -07:00
tst_null_byte_padding.sh Corrected pathing oversight. 2017-11-21 12:17:32 -07:00
tst_opaque_data.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_output.sh 1. Keep up to date by merging master 2018-01-16 11:00:09 -07:00
tst_radix.cdl Fix ncgen handling of octal constants (with leading 0). 2019-02-25 20:57:23 -07:00
tst_special_atts.c Make utilities support NC_COMPACT 2020-02-29 12:06:21 -07:00
tst_string_data.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_unicode.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_utf8.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_vlen_data.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
tst_vlen_demo.c ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
utils.c merge master and fix conflicts 2018-12-12 11:47:54 -07:00
utils.h provide NDEBUG version of macro NC_CHECK which does not use code file name 2019-02-16 10:17:06 -07:00
vardata.c Correcting a formatting error for scalars when dumping with ncdump -f 2020-04-28 15:49:03 -06:00
vardata.h ncdump, other directories updated with copyright stanza. 2018-12-06 15:36:53 -07:00
XGetopt.c