mirror of
https://github.com/Unidata/netcdf-c.git
synced 2024-12-21 08:39:46 +08:00
eb3d9eb0c9
Primary changes: * Add an improved cache system to speed up performance. * Fix NCZarr to properly handle scalar variables. Misc. Related Changes: * Added unit tests for extendible hash and for the generic cache. * Add config parameter to set size of the NCZarr cache. * Add initial performance tests but leave them unused. * Add CRC64 support. * Move location of ncdumpchunks utility from /ncgen to /ncdump. * Refactor auth support. Misc. Unrelated Changes: * More cleanup of the S3 support * Add support for S3 authentication in .rc files: HTTP.S3.ACCESSID and HTTP.S3.SECRETKEY. * Remove the hashkey from the struct OBJHDR since it is never used.
411 lines
10 KiB
C
411 lines
10 KiB
C
/*
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Copyright (c) 1998-2018 University Corporation for Atmospheric Research/Unidata
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See LICENSE.txt for license information.
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*/
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/** \file \internal
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Internal netcdf-4 functions.
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This file contains functions for manipulating ncindex objects.
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Warning: This code depends critically on the assumption that
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|void*| == |uintptr_t|
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*/
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/* Define this for debug so that table sizes are small */
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#undef SMALLTABLE
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#undef NCNOHASH
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#include "config.h"
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#include <stdlib.h>
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#include <stdio.h>
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#include <string.h>
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#ifdef HAVE_STDINT_H
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#include <stdint.h>
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#endif
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#include <assert.h>
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#include "nc4internal.h"
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#include "ncindex.h"
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#ifdef SMALLTABLE
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/* Keep the table sizes small initially */
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#define DFALTTABLESIZE 7
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#else
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#define DFALTTABLESIZE 37
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#endif
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/* Hack to access internal state of a hashmap. Use with care */
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/* Convert an entry from ACTIVE to DELETED;
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Return 0 if not found.
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*/
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extern int NC_hashmapdeactivate(NC_hashmap*, uintptr_t data);
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#ifndef NCNOHASH
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extern void printhashmap(NC_hashmap*);
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#endif
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/* Locate object by name in an NCindex */
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NC_OBJ*
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ncindexlookup(NCindex* ncindex, const char* name)
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{
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NC_OBJ* obj = NULL;
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if(ncindex == NULL || name == NULL)
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return NULL;
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{
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#ifndef NCNOHASH
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uintptr_t index;
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assert(ncindex->map != NULL);
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if(!NC_hashmapget(ncindex->map,(void*)name,strlen(name),&index))
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return NULL; /* not present */
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obj = (NC_OBJ*)nclistget(ncindex->list,(size_t)index);
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#else
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int i;
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for(i=0;i<nclistlength(ncindex->list);i++) {
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NC_OBJ* o = (NC_OBJ*)ncindex->list->content[i];
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if(strcmp(o->name,name)==0) return o;
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}
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#endif
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}
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return obj;
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}
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/* Get ith object in the vector */
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NC_OBJ*
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ncindexith(NCindex* index, size_t i)
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{
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if(index == NULL) return NULL;
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assert(index->list != NULL);
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return nclistget(index->list,i);
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}
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/* See if x is contained in the index */
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/* Return vector position if in index, otherwise return -1. */
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int
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ncindexfind(NCindex* index, NC_OBJ* nco)
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{
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int i;
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NClist* list;
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if(index == NULL || nco == NULL) return -1;
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list = index->list;
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for(i=0;i<nclistlength(list);i++) {
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NC_OBJ* o = (NC_OBJ*)list->content[i];
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if(nco == o) return i;
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}
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return -1;
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}
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/* Add object to the end of the vector, also insert into the hashmaps */
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/* Return 1 if ok, 0 otherwise.*/
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int
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ncindexadd(NCindex* ncindex, NC_OBJ* obj)
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{
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if(ncindex == NULL) return 0;
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#ifndef NCNOHASH
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{
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uintptr_t index; /*Note not the global id */
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index = (uintptr_t)nclistlength(ncindex->list);
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NC_hashmapadd(ncindex->map,index,(void*)obj->name,strlen(obj->name));
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}
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#endif
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if(!nclistpush(ncindex->list,obj))
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return 0;
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return 1;
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}
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/* Insert object at ith position of the vector, also insert into the hashmaps; */
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/* Return 1 if ok, 0 otherwise.*/
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int
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ncindexset(NCindex* ncindex, size_t i, NC_OBJ* obj)
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{
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if(ncindex == NULL) return 0;
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if(!nclistset(ncindex->list,i,obj)) return 0;
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#ifndef NCNOHASH
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{
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uintptr_t index = (uintptr_t)i;
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NC_hashmapadd(ncindex->map,index,(void*)obj->name,strlen(obj->name));
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}
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#endif
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return 1;
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}
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/**
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* Remove ith object from the index;
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* Return 1 if ok, 0 otherwise.*/
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int
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ncindexidel(NCindex* index, size_t i)
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{
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if(index == NULL) return 0;
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nclistremove(index->list,i);
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#ifndef NCNOHASH
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/* Remove from the hash map by deactivating its entry */
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if(!NC_hashmapdeactivate(index->map,(uintptr_t)i))
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return 0; /* not present */
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#endif
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return 1;
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}
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/*Return a duplicate of the index's vector */
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/* Return list if ok, NULL otherwise.*/
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NC_OBJ**
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ncindexdup(NCindex* index)
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{
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if(index == NULL || nclistlength(index->list) == 0)
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return NULL;
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return (NC_OBJ**)nclistclone(index->list,0/*!deep*/);
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}
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/* Count the non-null entries in an NCindex */
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int
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ncindexcount(NCindex* index)
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{
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int count = 0;
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int i;
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for(i=0;i<ncindexsize(index);i++) {
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if(ncindexith(index,i) != NULL) count++;
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}
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return count;
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}
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/*
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Rebuild the list map by rehashing all entries
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using their current, possibly changed id and name;
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also recompute their hashkey.
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*/
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/* Return 1 if ok, 0 otherwise.*/
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int
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ncindexrebuild(NCindex* index)
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{
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#ifndef NCNOHASH
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size_t i;
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size_t size = nclistlength(index->list);
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NC_OBJ** contents = (NC_OBJ**)nclistextract(index->list);
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/* Reset the index map and list*/
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nclistfree(index->list);
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index->list = nclistnew();
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nclistsetalloc(index->list,size);
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NC_hashmapfree(index->map);
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index->map = NC_hashmapnew(size);
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/* Now, reinsert all the attributes except NULLs */
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for(i=0;i<size;i++) {
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NC_OBJ* tmp = contents[i];
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if(tmp == NULL) continue; /* ignore */
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if(!ncindexadd(index,tmp))
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return 0;
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}
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#endif
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if(contents != NULL) free(contents);
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return 1;
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}
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/* Free a list map */
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int
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ncindexfree(NCindex* index)
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{
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if(index == NULL) return 1;
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nclistfree(index->list);
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NC_hashmapfree(index->map);
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free(index);
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return 1;
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}
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/* Create a new index */
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NCindex*
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ncindexnew(size_t size0)
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{
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NCindex* index = NULL;
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size_t size = (size0 == 0 ? DFALTTABLESIZE : size0);
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index = calloc(1,sizeof(NCindex));
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if(index == NULL) return NULL;
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index->list = nclistnew();
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if(index->list == NULL) {ncindexfree(index); return NULL;}
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nclistsetalloc(index->list,size);
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#ifndef NCNOHASH
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index->map = NC_hashmapnew(size);
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if(index->map == NULL) {ncindexfree(index); return NULL;}
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#endif
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return index;
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}
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#ifndef NCNOHASH
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/* Debug: handle the data key part */
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static const char*
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keystr(NC_hentry* e)
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{
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if(e->keysize < sizeof(uintptr_t))
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return (const char*)(&e->key);
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else
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return (const char*)(e->key);
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}
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#endif
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int
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ncindexverify(NCindex* lm, int dump)
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{
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size_t i;
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NClist* l = lm->list;
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int nerrs = 0;
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#ifndef NCNOHASH
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size_t m;
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#endif
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if(lm == NULL) {
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fprintf(stderr,"index: <empty>\n");
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return 1;
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}
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if(dump) {
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fprintf(stderr,"-------------------------\n");
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#ifndef NCNOHASH
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if(lm->map->active == 0) {
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fprintf(stderr,"hash: <empty>\n");
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goto next1;
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}
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for(i=0;i < lm->map->alloc; i++) {
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NC_hentry* e = &lm->map->table[i];
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if(e->flags != 1) continue;
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fprintf(stderr,"hash: %ld: data=%lu key=%s\n",(unsigned long)i,(unsigned long)e->data,keystr(e));
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fflush(stderr);
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}
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next1:
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#endif
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if(nclistlength(l) == 0) {
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fprintf(stderr,"list: <empty>\n");
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goto next2;
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}
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for(i=0;i < nclistlength(l); i++) {
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const char** a = (const char**)nclistget(l,i);
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fprintf(stderr,"list: %ld: name=%s\n",(unsigned long)i,*a);
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fflush(stderr);
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}
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fprintf(stderr,"-------------------------\n");
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fflush(stderr);
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}
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next2:
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#ifndef NCNOHASH
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/* Need to verify that every entry in map is also in vector and vice-versa */
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/* Verify that map entry points to same-named entry in vector */
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for(m=0;m < lm->map->alloc; m++) {
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NC_hentry* e = &lm->map->table[m];
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char** object = NULL;
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char* oname = NULL;
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uintptr_t udata = (uintptr_t)e->data;
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if((e->flags & 1) == 0) continue;
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object = nclistget(l,(size_t)udata);
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if(object == NULL) {
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fprintf(stderr,"bad data: %d: %lu\n",(int)m,(unsigned long)udata);
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nerrs++;
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} else {
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oname = *object;
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if(strcmp(oname,keystr(e)) != 0) {
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fprintf(stderr,"name mismatch: %d: %lu: hash=%s list=%s\n",
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(int)m,(unsigned long)udata,keystr(e),oname);
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nerrs++;
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}
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}
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}
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/* Walk vector and mark corresponding hash entry*/
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if(nclistlength(l) == 0 || lm->map->active == 0)
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goto done; /* cannot verify */
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for(i=0;i < nclistlength(l); i++) {
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int match;
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const char** xp = (const char**)nclistget(l,i);
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/* Walk map looking for *xp */
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for(match=0,m=0;m < lm->map->active; m++) {
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NC_hentry* e = &lm->map->table[m];
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if((e->flags & 1) == 0) continue;
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if(strcmp(keystr(e),*xp)==0) {
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if((e->flags & 128) == 128) {
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fprintf(stderr,"%ld: %s already in map at %ld\n",(unsigned long)i,keystr(e),(unsigned long)m);
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nerrs++;
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}
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match = 1;
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e->flags += 128;
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}
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}
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if(!match) {
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fprintf(stderr,"mismatch: %d: %s in vector, not in map\n",(int)i,*xp);
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nerrs++;
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}
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}
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/* Verify that every element in map in in vector */
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for(m=0;m < lm->map->active; m++) {
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NC_hentry* e = &lm->map->table[m];
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if((e->flags & 1) == 0) continue;
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if((e->flags & 128) == 128) continue;
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/* We have a hash entry not in the vector */
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fprintf(stderr,"mismatch: %d: %s->%lu in hash, not in vector\n",(int)m,keystr(e),(unsigned long)e->data);
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nerrs++;
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}
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/* clear the 'touched' flag */
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for(m=0;m < lm->map->active; m++) {
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NC_hentry* e = &lm->map->table[m];
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e->flags &= ~128;
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}
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done:
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#endif /*NCNOHASH*/
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fflush(stderr);
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return (nerrs > 0 ? 0: 1);
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}
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static const char*
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sortname(NC_SORT sort)
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{
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switch(sort) {
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case NCNAT: return "NCNAT";
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case NCVAR: return "NCVAR";
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case NCDIM: return "NCDIM";
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case NCATT: return "NCATT";
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case NCTYP: return "NCTYP";
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case NCGRP: return "NCGRP";
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default: break;
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}
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return "unknown";
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}
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void
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printindexlist(NClist* lm)
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{
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int i;
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if(lm == NULL) {
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fprintf(stderr,"<empty>\n");
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return;
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}
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for(i=0;i<nclistlength(lm);i++) {
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NC_OBJ* o = (NC_OBJ*)nclistget(lm,i);
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if(o == NULL)
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fprintf(stderr,"[%ld] <null>\n",(unsigned long)i);
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else
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fprintf(stderr,"[%ld] sort=%s name=|%s| id=%lu\n",
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(unsigned long)i,sortname(o->sort),o->name,(unsigned long)o->id);
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}
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}
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#ifndef NCNOHASH
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void
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printindexmap(NCindex* lm)
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{
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if(lm == NULL) {
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fprintf(stderr,"<empty>\n");
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return;
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}
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printhashmap(lm->map);
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}
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#endif
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void
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printindex(NCindex* lm)
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{
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if(lm == NULL) {
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fprintf(stderr,"<empty>\n");
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return;
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}
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printindexlist(lm->list);
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#ifndef NCNOHASH
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printindexmap(lm);
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#endif
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}
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