netcdf-c/libsrc4/nc4type.c

685 lines
19 KiB
C

/* Copyright 2005, University Corporation for Atmospheric Research. See
* the COPYRIGHT file for copying and redistribution conditions. */
/**
* @file
* @internal This file is part of netcdf-4, a netCDF-like interface
* for HDF5, or a HDF5 backend for netCDF, depending on your point of
* view.
*
* This file handles the nc4 user-defined type functions
* (i.e. compound and opaque types).
*
* @author Ed Hartnett
*/
#include "nc4internal.h"
#include "nc4dispatch.h"
/* The sizes of types may vary from platform to platform, but within
* netCDF files, type sizes are fixed. */
#define NC_CHAR_LEN sizeof(char) /**< @internal Size of char. */
#define NC_STRING_LEN sizeof(char *) /**< @internal Size of char *. */
#define NC_BYTE_LEN 1 /**< @internal Size of byte. */
#define NC_SHORT_LEN 2 /**< @internal Size of short. */
#define NC_INT_LEN 4 /**< @internal Size of int. */
#define NC_FLOAT_LEN 4 /**< @internal Size of float. */
#define NC_DOUBLE_LEN 8 /**< @internal Size of double. */
#define NC_INT64_LEN 8 /**< @internal Size of int64. */
/** @internal Names of atomic types. */
const char* nc4_atomic_name[NUM_ATOMIC_TYPES] = {"none", "byte", "char",
"short", "int", "float",
"double", "ubyte",
"ushort", "uint",
"int64", "uint64", "string"};
static const int nc4_atomic_size[NUM_ATOMIC_TYPES] = {0, NC_BYTE_LEN, NC_CHAR_LEN, NC_SHORT_LEN,
NC_INT_LEN, NC_FLOAT_LEN, NC_DOUBLE_LEN,
NC_BYTE_LEN, NC_SHORT_LEN, NC_INT_LEN, NC_INT64_LEN,
NC_INT64_LEN, NC_STRING_LEN};
/**
* @internal Find all user-defined types for a location. This finds
* all user-defined types in a group.
*
* @param ncid File and group ID.
* @param ntypes Pointer that gets the number of user-defined
* types. Ignored if NULL
* @param typeids Array that gets the typeids. Ignored if NULL.
*
* @return ::NC_NOERR No error.
* @return ::NC_EBADID Bad ncid.
* @author Ed Hartnett
*/
int
NC4_inq_typeids(int ncid, int *ntypes, int *typeids)
{
NC_GRP_INFO_T *grp;
NC_FILE_INFO_T *h5;
NC_TYPE_INFO_T *type;
int num = 0;
int retval;
LOG((2, "nc_inq_typeids: ncid 0x%x", ncid));
/* Find info for this file and group, and set pointer to each. */
if ((retval = nc4_find_grp_h5(ncid, &grp, &h5)))
return retval;
assert(h5 && grp);
/* Count types. */
if (grp->type) {
int i;
for(i=0;i<ncindexsize(grp->type);i++)
{
if((type = (NC_TYPE_INFO_T*)ncindexith(grp->type,i)) == NULL) continue;
if (typeids)
typeids[num] = type->hdr.id;
num++;
}
}
/* Give the count to the user. */
if (ntypes)
*ntypes = num;
return NC_NOERR;
}
/**
* @internal Get the name and size of an atomic type. For strings, 1 is
* returned.
*
* @param typeid1 Type ID.
* @param name Gets the name of the type.
* @param size Gets the size of one element of the type in bytes.
*
* @return ::NC_NOERR No error.
* @return ::NC_EBADID Bad ncid.
* @return ::NC_EBADTYPE Type not found.
* @author Dennis Heimbigner
*/
int
NC4_inq_atomic_type(nc_type typeid1, char *name, size_t *size)
{
LOG((2, "nc_inq_atomic_type: typeid %d", typeid1));
if (typeid1 >= NUM_ATOMIC_TYPES)
return NC_EBADTYPE;
if (name)
strcpy(name, nc4_atomic_name[typeid1]);
if (size)
*size = nc4_atomic_size[typeid1];
return NC_NOERR;
}
/**
* @internal Get the id and size of an atomic type by name.
*
* @param name [in] the name of the type.
* @param size [out] the size of one element of the type in bytes.
*
* @return ::NC_NOERR No error.
* @return ::NC_EBADID Bad ncid.
* @return ::NC_EBADTYPE Type not found.
* @author Dennis Heimbigner
*/
int
NC4_lookup_atomic_type(const char *name, nc_type* idp, size_t *sizep)
{
int i;
LOG((2, "nc_lookup_atomic_type: name %s ", name));
if (name == NULL || strlen(name) == 0)
return NC_EBADTYPE;
for(i=0;i<NUM_ATOMIC_TYPES;i++) {
if(strcasecmp(name,nc4_atomic_name[i])==0) {
if(idp) *idp = i;
if(sizep) *sizep = nc4_atomic_size[i];
return NC_NOERR;
}
}
return NC_EBADTYPE;
}
/**
* @internal Get the name and size of a type.
* For VLEN the base type len is returned.
*
* @param ncid File and group ID.
* @param typeid1 Type ID.
* @param name Gets the name of the type.
* @param size Gets the size of one element of the type in bytes.
*
* @return ::NC_NOERR No error.
* @return ::NC_EBADID Bad ncid.
* @return ::NC_EBADTYPE Type not found.
* @author Ed Hartnett
*/
int
NC4_inq_type(int ncid, nc_type typeid1, char *name, size_t *size)
{
NC_GRP_INFO_T *grp;
NC_TYPE_INFO_T *type;
int retval;
LOG((2, "nc_inq_type: ncid 0x%x typeid %d", ncid, typeid1));
/* If this is an atomic type, the answer is easy. */
if (typeid1 < NUM_ATOMIC_TYPES)
{
if (name)
strcpy(name, nc4_atomic_name[typeid1]);
if (size)
*size = nc4_atomic_size[typeid1];
return NC_NOERR;
}
/* Not an atomic type - so find group. */
if ((retval = nc4_find_nc4_grp(ncid, &grp)))
return retval;
/* Find this type. */
if (!(type = nclistget(grp->nc4_info->alltypes, typeid1)))
return NC_EBADTYPE;
if (name)
strcpy(name, type->hdr.name);
if (size)
{
if (type->nc_type_class == NC_VLEN)
*size = sizeof(nc_vlen_t);
else if (type->nc_type_class == NC_STRING)
*size = NC_STRING_LEN;
else
*size = type->size;
}
return NC_NOERR;
}
/**
* @internal Find info about any user defined type.
*
* @param ncid File and group ID.
* @param typeid1 Type ID.
* @param name Gets name of the type.
* @param size Gets size in bytes of one element of type.
* @param base_nc_typep Gets the base nc_type.
* @param nfieldsp Gets the number of fields.
* @param classp Gets the type class (NC_COMPOUND, NC_ENUM, NC_VLEN).
*
* @return ::NC_NOERR No error.
* @return ::NC_EBADID Bad ncid.
* @return ::NC_EBADTYPE Type not found.
* @author Ed Hartnett
*/
int
NC4_inq_user_type(int ncid, nc_type typeid1, char *name, size_t *size,
nc_type *base_nc_typep, size_t *nfieldsp, int *classp)
{
NC_GRP_INFO_T *grp;
NC_TYPE_INFO_T *type;
int retval;
LOG((2, "nc_inq_user_type: ncid 0x%x typeid %d", ncid, typeid1));
/* Find group metadata. */
if ((retval = nc4_find_nc4_grp(ncid, &grp)))
return retval;
/* Find this type. */
if (!(type = nclistget(grp->nc4_info->alltypes, typeid1)))
return NC_EBADTYPE;
/* Count the number of fields. */
if (nfieldsp)
{
if (type->nc_type_class == NC_COMPOUND)
*nfieldsp = nclistlength(type->u.c.field);
else if (type->nc_type_class == NC_ENUM)
*nfieldsp = nclistlength(type->u.e.enum_member);
else
*nfieldsp = 0;
}
/* Fill in size and name info, if desired. */
if (size)
{
if (type->nc_type_class == NC_VLEN)
*size = sizeof(nc_vlen_t);
else if (type->nc_type_class == NC_STRING)
*size = NC_STRING_LEN;
else
*size = type->size;
}
if (name)
strcpy(name, type->hdr.name);
/* VLENS and ENUMs have a base type - that is, they type they are
* arrays of or enums of. */
if (base_nc_typep)
{
if (type->nc_type_class == NC_ENUM)
*base_nc_typep = type->u.e.base_nc_typeid;
else if (type->nc_type_class == NC_VLEN)
*base_nc_typep = type->u.v.base_nc_typeid;
else
*base_nc_typep = NC_NAT;
}
/* If the user wants it, tell whether this is a compound, opaque,
* vlen, enum, or string class of type. */
if (classp)
*classp = type->nc_type_class;
return NC_NOERR;
}
/**
* @internal Given the ncid, typeid and fieldid, get info about the
* field.
*
* @param ncid File and group ID.
* @param typeid1 Type ID.
* @param fieldid Field ID.
* @param name Gets name of field.
* @param offsetp Gets offset of field.
* @param field_typeidp Gets field type ID.
* @param ndimsp Gets number of dims for this field.
* @param dim_sizesp Gets the dim sizes for this field.
*
* @return ::NC_NOERR No error.
* @return ::NC_EBADID Bad ncid.
* @author Ed Hartnett
*/
int
NC4_inq_compound_field(int ncid, nc_type typeid1, int fieldid, char *name,
size_t *offsetp, nc_type *field_typeidp, int *ndimsp,
int *dim_sizesp)
{
NC_GRP_INFO_T *grp;
NC_TYPE_INFO_T *type;
NC_FIELD_INFO_T *field;
int d, retval;
/* Find file metadata. */
if ((retval = nc4_find_nc4_grp(ncid, &grp)))
return retval;
/* Find this type. */
if (!(type = nclistget(grp->nc4_info->alltypes, typeid1)))
return NC_EBADTYPE;
/* Find the field. */
if (!(field = nclistget(type->u.c.field,fieldid)))
return NC_EBADFIELD;
if (name)
strcpy(name, field->hdr.name);
if (offsetp)
*offsetp = field->offset;
if (field_typeidp)
*field_typeidp = field->nc_typeid;
if (ndimsp)
*ndimsp = field->ndims;
if (dim_sizesp)
for (d = 0; d < field->ndims; d++)
dim_sizesp[d] = field->dim_size[d];
return NC_NOERR;
}
/**
* @internal Given the typeid and the name, get the fieldid.
*
* @param ncid File and group ID.
* @param typeid1 Type ID.
* @param name Name of field.
* @param fieldidp Pointer that gets new field ID.
*
* @return ::NC_NOERR No error.
* @return ::NC_EBADID Bad ncid.
* @return ::NC_EBADTYPE Type not found.
* @return ::NC_EBADFIELD Field not found.
* @author Ed Hartnett
*/
int
NC4_inq_compound_fieldindex(int ncid, nc_type typeid1, const char *name, int *fieldidp)
{
NC_FILE_INFO_T *h5;
NC_TYPE_INFO_T *type;
NC_FIELD_INFO_T *field;
char norm_name[NC_MAX_NAME + 1];
int retval;
int i;
LOG((2, "nc_inq_compound_fieldindex: ncid 0x%x typeid %d name %s",
ncid, typeid1, name));
/* Find file metadata. */
if ((retval = nc4_find_grp_h5(ncid, NULL, &h5)))
return retval;
/* Find the type. */
if ((retval = nc4_find_type(h5, typeid1, &type)))
return retval;
/* Did the user give us a good compound type typeid? */
if (!type || type->nc_type_class != NC_COMPOUND)
return NC_EBADTYPE;
/* Normalize name. */
if ((retval = nc4_normalize_name(name, norm_name)))
return retval;
/* Find the field with this name. */
for (i = 0; i < nclistlength(type->u.c.field); i++)
{
field = nclistget(type->u.c.field, i);
assert(field);
if (!strcmp(field->hdr.name, norm_name))
break;
field = NULL; /* because this is the indicator of not found */
}
if (!field)
return NC_EBADFIELD;
if (fieldidp)
*fieldidp = field->hdr.id;
return NC_NOERR;
}
/**
* @internal Get enum name from enum value. Name size will be <=
* NC_MAX_NAME.
*
* @param ncid File and group ID.
* @param xtype Type ID.
* @param value Value of enum.
* @param identifier Gets the identifier for this enum value.
*
* @return ::NC_NOERR No error.
* @return ::NC_EBADID Bad ncid.
* @return ::NC_EBADTYPE Type not found.
* @return ::NC_EINVAL Invalid type data.
* @author Ed Hartnett
*/
int
NC4_inq_enum_ident(int ncid, nc_type xtype, long long value, char *identifier)
{
NC_GRP_INFO_T *grp;
NC_TYPE_INFO_T *type;
NC_ENUM_MEMBER_INFO_T *enum_member;
long long ll_val;
int i;
int retval;
int found;
LOG((3, "nc_inq_enum_ident: xtype %d value %d\n", xtype, value));
/* Find group metadata. */
if ((retval = nc4_find_nc4_grp(ncid, &grp)))
return retval;
/* Find this type. */
if (!(type = nclistget(grp->nc4_info->alltypes, xtype)))
return NC_EBADTYPE;
/* Complain if they are confused about the type. */
if (type->nc_type_class != NC_ENUM)
return NC_EBADTYPE;
/* Move to the desired enum member in the list. */
for (found = 0, i = 0; i < nclistlength(type->u.e.enum_member); i++)
{
enum_member = nclistget(type->u.e.enum_member, i);
assert(enum_member);
switch (type->u.e.base_nc_typeid)
{
case NC_BYTE:
ll_val = *(char *)enum_member->value;
break;
case NC_UBYTE:
ll_val = *(unsigned char *)enum_member->value;
break;
case NC_SHORT:
ll_val = *(short *)enum_member->value;
break;
case NC_USHORT:
ll_val = *(unsigned short *)enum_member->value;
break;
case NC_INT:
ll_val = *(int *)enum_member->value;
break;
case NC_UINT:
ll_val = *(unsigned int *)enum_member->value;
break;
case NC_INT64:
case NC_UINT64:
ll_val = *(long long *)enum_member->value;
break;
default:
return NC_EINVAL;
}
LOG((4, "ll_val=%d", ll_val));
if (ll_val == value)
{
if (identifier)
strcpy(identifier, enum_member->name);
found = 1;
break;
}
}
/* If we didn't find it, life sucks for us. :-( */
if (!found)
return NC_EINVAL;
return NC_NOERR;
}
/**
* @internal Get information about an enum member: an identifier and
* value. Identifier size will be <= NC_MAX_NAME.
*
* @param ncid File and group ID.
* @param typeid1 Type ID.
* @param idx Enum member index.
* @param identifier Gets the identifier.
* @param value Gets the enum value.
*
* @return ::NC_NOERR No error.
* @return ::NC_EBADID Bad ncid.
* @return ::NC_EBADTYPE Type not found.
* @return ::NC_EINVAL Bad idx.
* @author Ed Hartnett
*/
int
NC4_inq_enum_member(int ncid, nc_type typeid1, int idx, char *identifier,
void *value)
{
NC_GRP_INFO_T *grp;
NC_TYPE_INFO_T *type;
NC_ENUM_MEMBER_INFO_T *enum_member;
int retval;
LOG((2, "nc_inq_enum_member: ncid 0x%x typeid %d", ncid, typeid1));
/* Find group metadata. */
if ((retval = nc4_find_nc4_grp(ncid, &grp)))
return retval;
/* Find this type. */
if (!(type = nclistget(grp->nc4_info->alltypes, typeid1)))
return NC_EBADTYPE;
/* Complain if they are confused about the type. */
if (type->nc_type_class != NC_ENUM)
return NC_EBADTYPE;
/* Move to the desired enum member in the list. */
if (!(enum_member = nclistget(type->u.e.enum_member, idx)))
return NC_EINVAL;
/* Give the people what they want. */
if (identifier)
strcpy(identifier, enum_member->name);
if (value)
memcpy(value, enum_member->value, type->size);
return NC_NOERR;
}
/**
* @internal Get the id of a type from the name.
*
* @param ncid File and group ID.
* @param name Name of type.
* @param typeidp Pointer that will get the type ID.
*
* @return ::NC_NOERR No error.
* @return ::NC_ENOMEM Out of memory.
* @return ::NC_EINVAL Bad size.
* @return ::NC_ENOTNC4 User types in netCDF-4 files only.
* @return ::NC_EBADTYPE Type not found.
* @author Ed Hartnett
*/
EXTERNL int
NC4_inq_typeid(int ncid, const char *name, nc_type *typeidp)
{
NC_GRP_INFO_T *grp;
NC_GRP_INFO_T *grptwo;
NC_FILE_INFO_T *h5;
NC_TYPE_INFO_T *type = NULL;
char *norm_name;
int i, retval;
/* Handle atomic types. */
for (i = 0; i < NUM_ATOMIC_TYPES; i++)
if (!strcmp(name, nc4_atomic_name[i]))
{
if (typeidp)
*typeidp = i;
return NC_NOERR;
}
/* Find info for this file and group, and set pointer to each. */
if ((retval = nc4_find_grp_h5(ncid, &grp, &h5)))
return retval;
assert(h5 && grp);
/* If the first char is a /, this is a fully-qualified
* name. Otherwise, this had better be a local name (i.e. no / in
* the middle). */
if (name[0] != '/' && strstr(name, "/"))
return NC_EINVAL;
/* Normalize name. */
if (!(norm_name = (char*)malloc(strlen(name) + 1)))
return NC_ENOMEM;
if ((retval = nc4_normalize_name(name, norm_name))) {
free(norm_name);
return retval;
}
/* Is the type in this group? If not, search parents. */
for (grptwo = grp; grptwo; grptwo = grptwo->parent) {
type = (NC_TYPE_INFO_T*)ncindexlookup(grptwo->type,norm_name);
if(type)
{
if (typeidp)
*typeidp = type->hdr.id;
break;
}
}
/* Still didn't find type? Search file recursively, starting at the
* root group. */
if (!type)
if ((type = nc4_rec_find_named_type(grp->nc4_info->root_grp, norm_name)))
if (typeidp)
*typeidp = type->hdr.id;
free(norm_name);
/* OK, I give up already! */
if (!type)
return NC_EBADTYPE;
return NC_NOERR;
}
/**
* @internal Get the class of a type
*
* @param h5 Pointer to the HDF5 file info struct.
* @param xtype NetCDF type ID.
* @param type_class Pointer that gets class of type, NC_INT,
* NC_FLOAT, NC_CHAR, or NC_STRING, NC_ENUM, NC_VLEN, NC_COMPOUND, or
* NC_OPAQUE.
*
* @return ::NC_NOERR No error.
* @author Ed Hartnett
*/
int
nc4_get_typeclass(const NC_FILE_INFO_T *h5, nc_type xtype, int *type_class)
{
int retval = NC_NOERR;
LOG((4, "%s xtype: %d", __func__, xtype));
assert(type_class);
/* If this is an atomic type, the answer is easy. */
if (xtype <= NC_STRING)
{
switch (xtype)
{
case NC_BYTE:
case NC_UBYTE:
case NC_SHORT:
case NC_USHORT:
case NC_INT:
case NC_UINT:
case NC_INT64:
case NC_UINT64:
/* NC_INT is class used for all integral types */
*type_class = NC_INT;
break;
case NC_FLOAT:
case NC_DOUBLE:
/* NC_FLOAT is class used for all floating-point types */
*type_class = NC_FLOAT;
break;
case NC_CHAR:
*type_class = NC_CHAR;
break;
case NC_STRING:
*type_class = NC_STRING;
break;
default:
BAIL(NC_EBADTYPE);
}
}
else
{
NC_TYPE_INFO_T *type;
/* See if it's a used-defined type */
if ((retval = nc4_find_type(h5, xtype, &type)))
BAIL(retval);
if (!type)
BAIL(NC_EBADTYPE);
*type_class = type->nc_type_class;
}
exit:
return retval;
}