mirror of
https://github.com/Unidata/netcdf-c.git
synced 2024-12-27 08:49:16 +08:00
d953899559
re: https://github.com/zarr-developers/zarr-specs/issues/41 After discussions with the Zarr community, it was decided to convert to a new representation of the NCZarr meta-data extensions: version 2. These extensions store information necessary to mapping the Zarr data model to the netcdf-4 data model. The basic change is to remove the NCZarr specific objects: .nczarr, .nczgroup, .nczarray, and .nczattr. The contents of these objects is moved into the corresponding existing Zarr objects as special keys. The mapping is as follows: * ''.nczarr'' => ''/.zgroup/_NCZARR_SUPERBLOCK_'' * ''.nczgroup => ''.zgroup/_NCZARR_GROUP_'' * ''.nczarray => ''.zarray/_NCZARR_ARRAY_'' * ''.nczattr => ''.zattr/_NCZARR_ATTR_'' Backward compatibility is maintained by looking for the object ''/.nczarr'' and if found, then assuming that the dataset is in the older version 1 format. This compatibility only supports reading of such version 1 datasets. Documentation and test cases are also added. Misc. Other Changes: 1. The json parsing code was added to the general library instead of nczarr only (ncjson.c, ncjson.h). 2. Improved support for different platform paths by allowing conversion to a single common path representation. 3. Add some new error codes. 4. Modify nccopy usage to mention the new chunking specification.
98 lines
3.8 KiB
CMake
98 lines
3.8 KiB
CMake
# Copyright 1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
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# 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014,
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# 2015, 2016, 2017, 2018
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# University Corporation for Atmospheric Research/Unidata.
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# See netcdf-c/COPYRIGHT file for more info.
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#####
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# Build doxygen documentation, if need be.
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#####
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IF(ENABLE_DOXYGEN)
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# The following is redundant but does not hurt anything.
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FILE(GLOB COPY_FILES ${CMAKE_CURRENT_SOURCE_DIR}/*.html ${CMAKE_CURRENT_SOURCE_DIR}/images ${CMAKE_CURRENT_SOURCE_DIR}/*.doc ${CMAKE_CURRENT_SOURCE_DIR}/*.xml ${CMAKE_CURRENT_SOURCE_DIR}/*.m4 ${CMAKE_CURRENT_SOURCE_DIR}/*.texi ${CMAKE_SOURCE_DIR}/oc2/auth.html.in)
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FILE(COPY ${COPY_FILES} DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
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# Set abs_top_srcdir to work with the autotools
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# doxyfile template.
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SET(abs_top_srcdir ${CMAKE_SOURCE_DIR})
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SET(abs_builddir ${CMAKE_CURRENT_BINARY_DIR})
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# Create general and guide doxyfiles.
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CONFIGURE_FILE(${CMAKE_CURRENT_SOURCE_DIR}/Doxyfile.in
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${CMAKE_CURRENT_BINARY_DIR}/Doxyfile @ONLY)
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# Generate User Documentation
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ADD_CUSTOM_TARGET(doc_all ALL
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${DOXYGEN_EXECUTABLE} ${CMAKE_CURRENT_BINARY_DIR}/Doxyfile
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COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/auth.html ${CMAKE_CURRENT_BINARY_DIR}/html
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COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/obsolete/fan_utils.html ${CMAKE_CURRENT_BINARY_DIR}/html
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WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
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COMMENT "Generating API Documentation" VERBATIM)
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# Create auth.html with some sed commands.
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ADD_CUSTOM_TARGET(oc2-auth
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cat ${CMAKE_SOURCE_DIR}/oc2/auth.html.in | sed -e "/<OC>/d" | sed -e "s|^<NC>||" | sed -e "s|zz|netcdf|g" -e "s|ZZ|netCDF|g" | sed -e "/stylesheet/r${CMAKE_SOURCE_DIR}/oc2/oc.css" -e "/stylesheet/d" > ${CMAKE_CURRENT_SOURCE_DIR}/auth.html
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COMMAND cp ${CMAKE_CURRENT_SOURCE_DIR}/auth.html ${CMAKE_CURRENT_BINARY_DIR}/html
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WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
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VERBATIM
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)
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# If ENABLE_DOXYGEN_LATEX_OUTPUT is true, automatically build
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# the PDF files.
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IF(ENABLE_DOXYGEN_PDF_OUTPUT)
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# Process 'main' netcdf documentation.
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FIND_PROGRAM(NC_MAKE NAMES make)
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FIND_PROGRAM(NC_PDFLATEX NAMES pdflatex)
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IF(NOT NC_MAKE OR NOT NC_PDFLATEX)
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MESSAGE(WARNING "Unable to locate 'make' and/or 'pdflatex' program. Unable to build pdf documentation.")
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ELSE()
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ADD_CUSTOM_TARGET(doc_all_pdf ALL
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make
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COMMAND mv refman.pdf ../netcdf.pdf
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WORKING_DIRECTORY "${CMAKE_CURRENT_BINARY_DIR}/latex_main"
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COMMENT "Building NetCDF PDF Documentation" VERBATIM
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)
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INSTALL(FILES "${CMAKE_CURRENT_BINARY_DIR}/netcdf.pdf"
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"${CMAKE_CURRENT_BINARY_DIR}/netcdf-guide.pdf"
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"${CMAKE_CURRENT_BINARY_DIR}/netcdf-tutorial.pdf"
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DESTINATION "${CMAKE_INSTALL_DOCDIR}/pdf"
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COMPONENT documentation)
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ENDIF()
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ENDIF()
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# Copy the image files used by markdown documentation
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# manually.
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FILE(GLOB IMG_FILES ${CMAKE_CURRENT_BINARY_DIR}/images/*.jpg
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${CMAKE_CURRENT_BINARY_DIR}/images/*.png)
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FILE(COPY ${IMG_FILES} DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/html)
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INSTALL(DIRECTORY "${CMAKE_CURRENT_BINARY_DIR}/html/"
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DESTINATION "${CMAKE_INSTALL_DOCDIR}/html"
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COMPONENT documentation)
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ENDIF(ENABLE_DOXYGEN)
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# Should match list in Makefile.am
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SET(CUR_EXTRA_DIST ${CUR_EXTRA_DIST}
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netcdf.m4 DoxygenLayout.xml Doxyfile.in footer.html
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mainpage.dox tutorial.dox guide.dox types.dox cdl.dox
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architecture.dox internal.dox windows-binaries.md
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building-with-cmake.md CMakeLists.txt groups.dox install.md notes.md
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install-fortran.md all-error-codes.md credits.md auth.md
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obsolete/fan_utils.html bestpractices.md filters.md indexing.md
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inmemory.md DAP2.dox attribute_conventions.md FAQ.md
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file_format_specifications.md known_problems.md
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COPYRIGHT.dox user_defined_formats.md DAP4.md DAP4.dox
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testserver.dox byterange.dox filters.md nczarr.md)
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ADD_EXTRA_DIST("${CUR_EXTRA_DIST}")
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