netcdf-c/nc_test4/bigmeta.c
Dennis Heimbigner b02703aa24 This PR primarily addresses Issue https://github.com/Unidata/netcdf-c/issues/725.
After a long discussion, I implemented the rules at the end of that issue.
They are documented in nccopy.1.

Additionally, I added a new, per-variable, -c flag that allows
for the direct setting of the chunking parameters for a variable.
The form is
    -c var:c1,c2,...ck
where var is the name of the variable (possibly a fully qualified name)
and the ci are the chunksizes for that variable. It must be the case
that the rank of the variable is k. If the new form is used as well
as the old form, then the new form overrides the old form for the
specified variable. Note that multiple occurrences of the new form
-c flag may be specified.

Misc. Other fixes
1. Added -M <size> option to nccopy to specify the minimum
   allowable chunksize.
2. Removed the unused variables from bigmeta.c
   (Issue https://github.com/Unidata/netcdf-c/issues/1079)
3. Fixed failure of nc_test4/tst_filter.sh by using the new -M
   flag (#1) to allow filter test on a small chunk size.
2018-07-26 20:16:02 -06:00

265 lines
5.9 KiB
C

/*
Create a netcdf-4 file with horrendously large metadata.
*/
#include "config.h"
#include <stdlib.h>
#include <stdio.h>
#include <string.h>
#include <time.h>
#include <assert.h>
#include <netcdf.h>
#ifdef HAVE_GETOPT_H
#include <getopt.h>
#endif
#undef DEBUG
/*
Total number of groups is NGROUPS^TREEDEPTH
TREEDEPTH = Depth of the group tree
NGROUPS = Number subgroups per group
NGROUPATTRS = Number group attributes per group
NDIMS = Number dimensions per group
NTYPES = Number user types per group
NVARS = Number of variables per group
VARRANK = Rank of variables: must be <= NDIMS
NVARATTRS = Number attributes per variable
*/
/* Define the Defaults */
#if 1
#define TREEDEPTH 6
#define NGROUPS 2
#define NGROUPATTRS 100
#define NDIMS 100
#define NTYPES 10
#define NVARS 100
#define VARRANK 2
#define NVARATTRS 500
#endif
/* Alternate Defaults for testing*/
#if 0
#define TREEDEPTH 2
#define NGROUPS 2
#define NGROUPATTRS 2
#define NDIMS 2
#define NTYPES 2
#define NVARS 2
#define VARRANK 2
#define NVARATTRS NGROUPATTRS
#endif
#define FILE "bigmeta.nc"
#define CHECK(expr) assert((expr) == NC_NOERR)
static int treedepth = TREEDEPTH;
static int ngroups = NGROUPS;
static int ngroupattrs = NGROUPATTRS;
static int ndims = NDIMS;
static int ntypes = NTYPES;
static int nvars = NVARS;
static int varrank = VARRANK;
static int nvarattrs = NVARATTRS;
/* Define the getopt tags */
#define OPT_UNKNOWN 0
#define OPT_TREEDEPTH 1
#define OPT_NGROUPS 2
#define OPT_NGROUPATTRS 3
#define OPT_NDIMS 4
#define OPT_NTYPES 5
#define OPT_NVARS 6
#define OPT_VARRANK 7
#define OPT_NVARATTRS 8
static struct option options[] = {
{"treedepth", 1, NULL, OPT_TREEDEPTH},
{"ngroups", 1, NULL, OPT_NGROUPS},
{"ngroupattrs", 1, NULL, OPT_NGROUPATTRS},
{"ndims", 1, NULL, OPT_NDIMS},
{"ntypes", 1, NULL, OPT_NTYPES},
{"nvars", 1, NULL, OPT_NVARS},
{"varrank", 1, NULL, OPT_VARRANK},
{"nvarattrs", 1, NULL, OPT_NVARATTRS},
{NULL, 0, NULL, 0}
};
/**************************************************/
static void
reportparameters(void)
{
fprintf(stderr,"--treedepth=%d\n",treedepth);
fprintf(stderr,"--ngroups=%d\n",ngroups);
fprintf(stderr,"--ngroupattrs=%d\n",ngroupattrs);
fprintf(stderr,"--ndims=%d\n",ndims);
fprintf(stderr,"--ntypes=%d\n",ntypes);
fprintf(stderr,"--nvars=%d\n",nvars);
fprintf(stderr,"--varrank=%d\n",varrank);
fprintf(stderr,"--nvarattrs=%d\n",nvarattrs);
fflush(stderr);
}
/* Build a compound type with two fields */
static void
buildcmpdtype(int grpid, int typindex)
{
char name[NC_MAX_NAME+1];
int typid;
snprintf(name,NC_MAX_NAME,"cmpd%d",typindex);
CHECK(nc_def_compound(grpid, 2*sizeof(int), name, &typid));
CHECK(nc_insert_compound(grpid, typid, "f1", 0, NC_INT));
CHECK(nc_insert_compound(grpid, typid, "f2", sizeof(int), NC_INT));
}
/* Build an enum type with two members */
static void
buildenumtype(int grpid, int typindex)
{
char name[NC_MAX_NAME+1];
int typid;
int val0 = 17;
int val1 = 37;
snprintf(name,NC_MAX_NAME,"enum%d",typindex);
CHECK(nc_def_enum(grpid, NC_INT, name, &typid));
CHECK(nc_insert_enum(grpid, typid, "m0", &val0));
CHECK(nc_insert_enum(grpid, typid, "m1", &val1));
}
/* Build attributes for either group or var */
static void
buildatts(int grpid, int varid)
{
char name[NC_MAX_NAME+1];
int i, count;
count = (varid == NC_GLOBAL? ngroupattrs : nvarattrs);
for(i=0;i<count;i++) {
snprintf(name,NC_MAX_NAME,"a%d",i);
CHECK(nc_put_att_int(grpid, varid, name, NC_INT, 1, &i));
}
}
static void
buildgroup(int parent, int grpindex, int depth)
{
char name[NC_MAX_NAME+1];
int i, grpid, varid;
int dimids[NDIMS];
if(depth == 0) return;
snprintf(name,NC_MAX_NAME,"g%d",grpindex);
CHECK(nc_def_grp(parent, name, &grpid));
/* Add dimensions and capture ids */
for(i=0;i<ndims;i++) {
snprintf(name,NC_MAX_NAME,"d%d",i);
CHECK(nc_def_dim(grpid, name, i, &dimids[i]));
}
/* Add types: even index => compound, odd => enum */
for(i=0;i<ntypes;i++) {
if((i % 2) == 0)
buildcmpdtype(grpid,i);
else
buildenumtype(grpid,i);
}
/* Add variables (plus their attributes */
for(i=0;i<nvars;i++) {
snprintf(name,NC_MAX_NAME,"v%d",i);
CHECK(nc_def_var(grpid, name, NC_INT, VARRANK, dimids, &varid));
/* Make variable be nofill */
CHECK(nc_def_var_fill(grpid,varid,1,NULL));
buildatts(grpid,varid);
}
/* Add group attributes */
buildatts(grpid,NC_GLOBAL);
/* Build subgroups */
for(i=0;i<ngroups;i++) {
buildgroup(grpid,i,depth-1);
}
}
int
main(int argc, char **argv)
{
int i, ncid;
time_t starttime, endtime;
long long delta;
int tag;
if(argc > 1) {
while ((tag = getopt_long_only(argc, argv, "", options, NULL)) >= 0) {
#ifdef DEBUG
fprintf(stderr,"arg=%s value=%s\n",argv[optind-1],optarg);
#endif
switch (tag) {
case OPT_TREEDEPTH:
treedepth = atoi(optarg);
break;
case OPT_NGROUPS:
ngroups = atoi(optarg);
break;
case OPT_NGROUPATTRS:
ngroupattrs = atoi(optarg);
break;
case OPT_NDIMS:
ndims = atoi(optarg);
break;
case OPT_NTYPES:
ntypes = atoi(optarg);
break;
case OPT_NVARS:
nvars = atoi(optarg);
break;
case OPT_VARRANK:
varrank = atoi(optarg);
break;
case OPT_NVARATTRS:
nvarattrs = atoi(optarg);
break;
case ':':
fprintf(stderr,"missing argument\n");
exit(1);
case '?':
default:
fprintf(stderr,"unknown option\n");
exit(1);
}
}
}
reportparameters();
starttime = 0;
endtime = 0;
time(&starttime);
CHECK(nc_create(FILE, NC_NETCDF4, &ncid));
/* Build subgroups */
for(i=0;i<NGROUPS;i++) {
buildgroup(ncid,i,TREEDEPTH - 1);
}
CHECK(nc_close(ncid));
time(&endtime);
/* Compute the delta 1 second resolution is fine for this */
delta = (long long)(endtime - starttime);
printf("create delta=%lld\n",delta);
return 0;
return 0;
}