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2ea1cf5f1b
stored in the _NCProperties attribute to allow two things:
1. capture of additional library dependencies (over and above
hdf5)
2. Recognition of non-netcdf libraries that create netcdf-4 format
files.
To this end, the _NCProperties format has been extended to be
and arbitrary set of key=value pairs separated by commas.
This new format has version = 2, and uses commas as the pair separator.
Thus the general form is:
_NCProperties = "version=2,key1=value,key2=value2..." ;
This new version is accompanied by a new ./configure option of the form
--with-ncproperties="key1=value1,key2=value2..."
that specifies pairs to add to the _NCProperties attribute for all
files created with that netcdf library.
At this point, what is missing is some programmatic way to
specify either all the pairs or additional pairs
to the _NCProperties attribute. Not sure of the best way
to do this.
Builders using non-netcdf libraries can specify
whatever they want in the key value pairs (as long
as the version=2 is specified first).
By convention, the primary library is expected to be the
the first pair after the leading version=2 pair, but this
is convention only and is neither required nor enforced.
Related changes:
1. Fixed the tests that check _NCProperties to properly operate with version=2.
2. When reading a version 1 _NCProperties attribute, convert it to look
like a version 2 attribute.
2. Added some version 2 tests to ncdump/tst_fileinfo.c and
ncdump/tst_fileinfo.sh
Misc Changes:
1. Fix minor problem in ncdap_test/testurl.sh where a parameter to
buildurl needed to be quoted.
2. Minor fix to ncgen to swap switches -H and -h to be consistent
with other utilities.
3. Document the -M flag in nccopy usage() and the nccopy man page.
4. Modify a test case to use the nccopy -M flag.
122 lines
4.6 KiB
Bash
Executable File
122 lines
4.6 KiB
Bash
Executable File
#!/bin/sh
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# This shell script tests ncdump for netcdf-4
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# Ed Hartnett, Dennis Heimbigner, Ward Fisher
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if test "x$srcdir" = x ; then srcdir=`pwd`; fi
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. ../test_common.sh
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set -e
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# Remove the version information from _NCProperties
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cleanncprops() {
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src="$1"
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dst="$2"
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rm -f $dst
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cat $src \
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| sed -e 's/_SuperblockVersion = 1/_SuperblockVersion = 0/' \
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| sed -e 's/\(netcdflibversion\|netcdf\)=.*|/\1=NNNN|/' \
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| sed -e 's/\(hdf5libversion\|hdf5\)=.*"/\1=HHHH"/' \
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| cat >$dst
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}
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ERR() {
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RES=$?
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if [ $RES -ne 0 ]; then
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echo "Error found: $RES"
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exit $RES
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fi
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}
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echo ""
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echo "*** Testing ncgen and ncdump for netCDF-4 format."
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${NCGEN} -k nc4 -b -o tst_netcdf4_c0_4.nc ${ncgenc04} ;ERR
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${NCDUMP} -n c1 tst_netcdf4_c0_4.nc | sed 's/e+0/e+/g' > tst_netcdf4_c1_4.cdl ; ERR
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diff -b tst_netcdf4_c1_4.cdl $srcdir/ref_ctest1_nc4.cdl ; ERR
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echo "*** Creating test output tst_netcdf4_c0.nc."
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${NCGEN} -k nc7 -b -o tst_netcdf4_c0.nc ${ncgenc0} ; ERR
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echo "*** Testing that program tst_h_rdc0 can read tst_netcdf4_c0.nc."
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${execdir}/tst_h_rdc0 ; ERR
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echo "*** Running tst_create_files.c to create test files."
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${execdir}/tst_create_files ; ERR
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echo "*** Testing tst_create_files output for netCDF-4 features."
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${NCDUMP} tst_solar_1.nc | sed 's/e+0/e+/g' > tst_solar_1.cdl ; ERR
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diff -b tst_solar_1.cdl $srcdir/ref_tst_solar_1.cdl ; ERR
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${NCDUMP} tst_solar_2.nc | sed 's/e+0/e+/g' > tst_solar_2.cdl ; ERR
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diff -b tst_solar_2.cdl $srcdir/ref_tst_solar_2.cdl ; ERR
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echo "*** Running tst_group_data.c to create test files."
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${execdir}/tst_group_data ; ERR
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${NCDUMP} tst_group_data.nc | sed 's/e+0/e+/g' > tst_group_data.cdl ; ERR
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diff -b tst_group_data.cdl $srcdir/ref_tst_group_data.cdl ; ERR
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echo "*** Testing -v option with absolute name and groups..."
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${NCDUMP} -v g2/g3/var tst_group_data.nc | sed 's/e+0/e+/g' > tst_group_data.cdl ; ERR
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diff -b tst_group_data.cdl $srcdir/ref_tst_group_data_v23.cdl ; ERR
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echo "*** Testing -v option with relative name and groups..."
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${NCDUMP} -v var,var2 tst_group_data.nc | sed 's/e+0/e+/g' > tst_group_data.cdl ; ERR
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diff -b tst_group_data.cdl $srcdir/ref_tst_group_data.cdl ; ERR
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echo "*** Running tst_enum_data.c to create test files."
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${execdir}/tst_enum_data ; ERR
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${NCDUMP} tst_enum_data.nc | sed 's/e+0/e+/g' > tst_enum_data.cdl ; ERR
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diff -b tst_enum_data.cdl $srcdir/ref_tst_enum_data.cdl ; ERR
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echo "*** Running tst_opaque_data.c to create test files."
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${execdir}/tst_opaque_data ; ERR
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${NCDUMP} tst_opaque_data.nc | sed 's/e+0/e+/g' > tst_opaque_data.cdl ; ERR
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diff -b tst_opaque_data.cdl $srcdir/ref_tst_opaque_data.cdl ; ERR
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echo "*** Running tst_vlen_data.c to create test files."
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${execdir}/tst_vlen_data ; ERR
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${NCDUMP} tst_vlen_data.nc | sed 's/e+0/e+/g' > tst_vlen_data.cdl ; ERR
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diff -b tst_vlen_data.cdl $srcdir/ref_tst_vlen_data.cdl ; ERR
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echo "*** Running tst_comp.c to create test files."
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${execdir}/tst_comp ; ERR
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${NCDUMP} tst_comp.nc | sed 's/e+0/e+/g' > tst_comp.cdl ; ERR
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diff -b tst_comp.cdl $srcdir/ref_tst_comp.cdl ; ERR
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echo "*** Running tst_nans.c to create test files."
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${execdir}/tst_nans ; ERR
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${NCDUMP} tst_nans.nc | sed 's/e+0/e+/g' > tst_nans.cdl ; ERR
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diff -b tst_nans.cdl $srcdir/ref_tst_nans.cdl ; ERR
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# Do unicode test only if it exists => BUILD_UTF8 is true
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if test -f ./tst_unicode -o -f ./tst_unicode.exe ; then
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echo "*** dumping tst_unicode.nc to tst_unicode.cdl..."
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${execdir}/tst_unicode ; ERR
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${NCDUMP} tst_unicode.nc | sed 's/e+0/e+/g' > tst_unicode.cdl ; ERR
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#echo "*** comparing tst_unicode.cdl with ref_tst_unicode.cdl..."
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#diff -b tst_unicode.cdl $srcdir/ref_tst_unicode.cdl
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fi
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echo "*** Running tst_special_atts.c to create test files."
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${execdir}/tst_special_atts ; ERR
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${NCDUMP} -c -s tst_special_atts.nc > tst_special_atts.cdl ; ERR
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cleanncprops tst_special_atts.cdl tst_special_atts.tmp
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cleanncprops $srcdir/ref_tst_special_atts.cdl ref_tst_special_atts.tmp
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echo "*** comparing tst_special_atts.cdl with ref_tst_special_atts.cdl..."
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diff -b tst_special_atts.tmp ref_tst_special_atts.tmp ; ERR
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#echo ""
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#echo "*** Testing ncdump on file with corrupted header "
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#rm -f ./ignore_tst_netcdf4
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#if ${NCDUMP} ${srcdir}/ref_test_corrupt_magic.nc > ./ignore_tst_netcdf4 2>&1 ; then
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#echo "***Fail: ncdump should have failed on ref_test_corrupt_magic.nc"
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#else
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#echo "***XFail: ncdump properly failed on ref_test_corrupt_magic.nc"
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#fi
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#rm -fr ./ignore_tst_netcdf4
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# This should work, but does not. See github issue 982.
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#echo "*** creating tst_output_irish_rover.cdl from ref_tst_irish_rover.nc..."
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#${NCDUMP} ref_tst_irish_rover.nc > tst_output_irish_rover.cdl
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rm -f *.tmp
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echo "*** All ncgen and ncdump test output for netCDF-4 format passed!"
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exit 0
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