netcdf-c/nc_perf
Dennis Heimbigner d2316f866c Additional Fixes to NCZarr
Primary Fixes:
* Add a whole variable optimization -- used in the rare case that nc_get/put_vara covers the whole of a variable and the variable has a single chunk.
* Fix chunking error when stride causes whole chunks to be skipped.
* Fix some memory leaks
* Add test cases
* Add one performance test to nczarr_test/. This uses the timer utils from unit_test: timer_utils.[ch].
* Move ncdumpchunks utility from ncdump to nczarr_test

Misc. Other Changes:
* Make check for aws libraries conditional on --enable-nczarr-s3
* Remove all but one bm tests from nczarr_test until they are working.
* Remove another dependency on HDF5 from supposedly non-HDF5 specific code; specifically hdf5_log_hdf5.
* Make the BAIL2 macro be hdf5 specific and replace elsewhere with an HDF5 independent equivalent.
* Move hdf5cache.c to libsrc4/nc4cache.c because it is used by nczarr.
* Modify unit_tests so that some of them are run even if using Windows.
* Misc. small bug fixes and refactors and memory leaks.
* Rename some conflicting tests for cmake.
* Attempted to make nc_perf work with cmake and failed.
2020-12-16 20:48:02 -07:00
..
bigmeta.c
bm_file.c cleanup of 2d decomposition 2020-07-04 10:31:12 -06:00
bm_many_atts.c
bm_many_objs.c
bm_netcdf4_recs.c
CMakeLists.txt Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
gfs_sample.cdl further development 2020-07-01 12:26:12 -06:00
Makefile.am further development 2020-07-01 12:26:12 -06:00
openbigmeta.c
perftest.sh
run_bm_elena.sh Spelling fixes 2019-09-18 08:03:01 -06:00
run_bm_test1.sh
run_bm_test2.sh
run_gfs_test.sh.in fixed warnings in tst_create_files.c 2020-06-30 10:40:05 -06:00
run_knmi_bm.sh
run_par_bm_test.sh.in fixed warnings in tst_create_files.c 2020-06-30 10:40:05 -06:00
run_tst_chunks.sh
tst_ar4_3d.c
tst_ar4_4d.c
tst_ar4.c
tst_attsperf.c
tst_bm_rando.c improved docs for cache functions, added libhdf5/hdf5cache.c to Doxyfile.in, added benchmark program for cache settings 2019-11-25 16:33:04 -07:00
tst_chunks3.c
tst_create_files.c Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
tst_files2.c
tst_files3.c
tst_gfs_data_1.c getting tst_gfs_data_1 ready to merge 2020-07-08 14:20:42 -06:00
tst_h_many_atts.c
tst_knmi.c
tst_mem1.c Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
tst_mem.c fixed Makefile to refrain from building nc_perf/tst_gfs_data_1 for non-parallel builds 2020-07-01 08:28:58 -06:00
tst_utils.c
tst_wrf_reads.c