netcdf-c/libhdf5
Dennis Heimbigner 2afbdbd18f Add support for the XArray Zarr _ARRAY_DIMENSIONS attribute
The XArray implementation that uses Zarr for storage
provides a mechanism to simulate named dimensions.
It does this by adding a per-variable attribute called
_ARRAY_DIMENSIONS. This attribute contains a list of names
to be matched against the shape values of the variable.
In effect a named dimension is created with the name
_ARRAY_DIMENSIONS(i) and length shape(i) for all i
in range 0..rank(variable).
Both read and write support is provided.

This XArray support is only invoked if the mode value
of "xarray" is defined. So for example, as in this URL.
````
https://s3.us-west-1.amazonaws.com/bucket/dataset#mode=nczarr,xarray,s3
````
Note that the "xarray" mode flag also implies mode flag "zarr", so the above
is equivalent to this URL.
````
https://s3.us-west-1.amazonaws.com/bucket/dataset#mode=nczarr,zarr,xarray,s3
````

The primary change to implement this was to unify the handling
of dimension references in libnczarr/zsync.

A test for this and other pure-zarr features was added as
nczarr_test/run_purezarr.sh

Other changes:
* Make sure distcheck leaves no files around.
* Change the special attribute flag DIMSCALEFLAG to HIDDENATTRFLAG
  to support the xarray attribute.
* Annotate the zmap implementations with feature flags such as
  WRITEONCE (for zip files).
2021-02-24 13:46:11 -07:00
..
CMakeLists.txt Ensure MPI header found without wrapper 2021-01-19 09:38:07 -07:00
H5FDhttp.c This PR adds EXPERIMENTAL support for accessing data in the 2020-06-28 18:02:47 -06:00
H5FDhttp.h Provide byte-range reading of remote datasets 2019-01-01 18:27:36 -07:00
hdf5attr.c Add support for the XArray Zarr _ARRAY_DIMENSIONS attribute 2021-02-24 13:46:11 -07:00
hdf5create.c Convert filename from ANSI to UTF-8 before calling HDF5. 2020-07-14 22:44:42 +09:00
hdf5debug.c Fix reclamation of the ->format_XXX_info fields 2020-03-29 12:48:59 -06:00
hdf5debug.h Add support for multiple filters per variable. 2020-02-16 12:59:33 -07:00
hdf5dim.c Provide a Number of fixes/improvements to NCZarr 2020-11-19 17:01:04 -07:00
hdf5dispatch.c Mostly revert the filter code to reduce its complexity of use. 2020-09-27 12:43:46 -06:00
hdf5err.h Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
hdf5file.c Fix merge error from PR https://github.com/Unidata/netcdf-c/pull/1892/files 2020-12-01 20:10:48 -07:00
hdf5filter.c More NCZarr optimizations 2021-01-06 13:35:59 -07:00
hdf5grp.c Provide a Number of fixes/improvements to NCZarr 2020-11-19 17:01:04 -07:00
hdf5internal.c Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
hdf5open.c Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
hdf5type.c Revert "Revert "Fix nczarr-experimental: improve build support, disengage hdf5 vs netcdf4 flags, and find AWS libraries"" 2020-08-17 19:15:47 -06:00
hdf5var.c Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
Makefile.am Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
nc4hdf.c Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
nc4info.c Remove trailing comma from _NCProperties attribute value. 2020-11-14 15:07:08 -07:00
nc4mem.c
nc4memcb.c Spelling fixes 2019-09-18 08:03:01 -06:00