mirror of
https://github.com/Unidata/netcdf-c.git
synced 2024-12-21 08:39:46 +08:00
93e9d92778
* Replace wholevar with more useful wholechunk optimization * Add optimization to read multiple values at one time * Replace NCDEFAULT_get/put_vars with native nczarr versions. * Clarify chunk projection computations * zdebdispatch.h * Add more chunking test cases and re-enable run_chunkcases * If !szip, then suppress deflate interference test * Make H5Znoop(1) filter produce more information * cleanup bzlib.c API
186 lines
4.5 KiB
C
186 lines
4.5 KiB
C
/*********************************************************************
|
|
* Copyright 2018, UCAR/Unidata
|
|
* See netcdf/COPYRIGHT file for copying and redistribution conditions.
|
|
*********************************************************************/
|
|
#include "zincludes.h"
|
|
|
|
/*Forward*/
|
|
static int buildodom(int rank, NCZOdometer** odomp);
|
|
|
|
void
|
|
nczodom_reset(NCZOdometer* odom)
|
|
{
|
|
int r;
|
|
for(r=0;r<odom->rank;r++)
|
|
odom->index[r] = odom->start[r];
|
|
}
|
|
|
|
NCZOdometer*
|
|
nczodom_new(int rank, const size64_t* start, const size64_t* stop, const size64_t* stride, const size64_t* len)
|
|
{
|
|
int i;
|
|
NCZOdometer* odom = NULL;
|
|
if(buildodom(rank,&odom)) return NULL;
|
|
odom->properties.stride1 = 1; /* assume */
|
|
odom->properties.start0 = 1; /* assume */
|
|
for(i=0;i<rank;i++) {
|
|
odom->start[i] = (size64_t)start[i];
|
|
odom->stop[i] = (size64_t)stop[i];
|
|
odom->stride[i] = (size64_t)stride[i];
|
|
odom->len[i] = (size64_t)len[i];
|
|
if(odom->start[i] != 0) odom->properties.start0 = 0;
|
|
if(odom->stride[i] != 1) odom->properties.stride1 = 0;
|
|
}
|
|
nczodom_reset(odom);
|
|
for(i=0;i<rank;i++)
|
|
assert(stop[i] >= start[i] && stride[i] > 0 && (len[i]+1) >= stop[i]);
|
|
return odom;
|
|
}
|
|
|
|
NCZOdometer*
|
|
nczodom_fromslices(int rank, const NCZSlice* slices)
|
|
{
|
|
size_t i;
|
|
NCZOdometer* odom = NULL;
|
|
|
|
if(buildodom(rank,&odom)) return NULL;
|
|
odom->properties.stride1 = 1; /* assume */
|
|
odom->properties.start0 = 1; /* assume */
|
|
for(i=0;i<rank;i++) {
|
|
odom->start[i] = slices[i].start;
|
|
odom->stop[i] = slices[i].stop;
|
|
odom->stride[i] = slices[i].stride;
|
|
odom->len[i] = slices[i].len;
|
|
if(odom->start[i] != 0) odom->properties.start0 = 0;
|
|
if(odom->stride[i] != 1) odom->properties.stride1 = 0;
|
|
}
|
|
nczodom_reset(odom);
|
|
for(i=0;i<rank;i++) {
|
|
assert(slices[i].stop >= slices[i].start && slices[i].stride > 0);
|
|
assert((slices[i].stop - slices[i].start) <= slices[i].len);
|
|
}
|
|
return odom;
|
|
}
|
|
|
|
void
|
|
nczodom_free(NCZOdometer* odom)
|
|
{
|
|
if(odom == NULL) return;
|
|
nullfree(odom->start);
|
|
nullfree(odom->stop);
|
|
nullfree(odom->stride);
|
|
nullfree(odom->len);
|
|
nullfree(odom->index);
|
|
nullfree(odom);
|
|
}
|
|
|
|
int
|
|
nczodom_more(const NCZOdometer* odom)
|
|
{
|
|
return (odom->index[0] < odom->stop[0]);
|
|
}
|
|
|
|
void
|
|
nczodom_next(NCZOdometer* odom)
|
|
{
|
|
int i;
|
|
int rank;
|
|
rank = odom->rank;
|
|
for(i=rank-1;i>=0;i--) {
|
|
odom->index[i] += odom->stride[i];
|
|
if(odom->index[i] < odom->stop[i]) break;
|
|
if(i == 0) goto done; /* leave the 0th entry if it overflows */
|
|
odom->index[i] = odom->start[i]; /* reset this position */
|
|
}
|
|
done:
|
|
return;
|
|
}
|
|
|
|
/* Get the value of the odometer */
|
|
size64_t*
|
|
nczodom_indices(const NCZOdometer* odom)
|
|
{
|
|
return odom->index;
|
|
}
|
|
|
|
size64_t
|
|
nczodom_offset(const NCZOdometer* odom)
|
|
{
|
|
int i;
|
|
size64_t offset;
|
|
int rank = odom->rank;
|
|
|
|
offset = 0;
|
|
for(i=0;i<rank;i++) {
|
|
#if 1
|
|
offset *= odom->len[i];
|
|
#else
|
|
offset *= odom->stop[i];
|
|
#endif
|
|
offset += odom->index[i];
|
|
}
|
|
return offset;
|
|
}
|
|
|
|
static int
|
|
buildodom(int rank, NCZOdometer** odomp)
|
|
{
|
|
int stat = NC_NOERR;
|
|
NCZOdometer* odom = NULL;
|
|
if(odomp) {
|
|
if((odom = calloc(1,sizeof(NCZOdometer))) == NULL)
|
|
goto done;
|
|
odom->rank = rank;
|
|
if((odom->start=malloc(sizeof(size64_t)*rank))==NULL) goto nomem;
|
|
if((odom->stop=malloc(sizeof(size64_t)*rank))==NULL) goto nomem;
|
|
if((odom->stride=malloc(sizeof(size64_t)*rank))==NULL) goto nomem;
|
|
if((odom->len=malloc(sizeof(size64_t)*rank))==NULL) goto nomem;
|
|
if((odom->index=malloc(sizeof(size64_t)*rank))==NULL) goto nomem;
|
|
*odomp = odom; odom = NULL;
|
|
}
|
|
done:
|
|
nczodom_free(odom);
|
|
return stat;
|
|
nomem:
|
|
stat = NC_ENOMEM;
|
|
goto done;
|
|
}
|
|
|
|
/* Compute the total avail in last position */
|
|
size64_t
|
|
nczodom_avail(const NCZOdometer* odom)
|
|
{
|
|
size64_t avail;
|
|
/* The best we can do is compute the count for the rightmost index */
|
|
avail = (odom->stop[odom->rank-1] - odom->start[odom->rank-1]);
|
|
return avail;
|
|
}
|
|
|
|
/*
|
|
Incr the odometer by nczodom_avail() values.
|
|
Calling nczodom_next at that point should properly increment
|
|
rest of the odometer.
|
|
*/
|
|
void
|
|
nczodom_skipavail(NCZOdometer* odom)
|
|
{
|
|
if(odom->rank > 0)
|
|
odom->index[odom->rank-1] = odom->stop[odom->rank-1];
|
|
}
|
|
|
|
#if 0
|
|
size64_t
|
|
nczodom_laststride(const NCZOdometer* odom)
|
|
{
|
|
assert(odom != NULL && odom->rank > 0);
|
|
return odom->stride[odom->rank-1];
|
|
}
|
|
|
|
size64_t
|
|
nczodom_lastlen(const NCZOdometer* odom)
|
|
{
|
|
assert(odom != NULL && odom->rank > 0);
|
|
return odom->len[odom->rank-1];
|
|
}
|
|
#endif
|