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https://github.com/Unidata/netcdf-c.git
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65038335bf
## Include <getopt.h> in various utilities re: https://github.com/Unidata/netcdf-c/issues/2303 As noted, some utilities are using getopt() without including getopt.h, so add as needed. ## Turn off run_diskless2.sh when ENABLE_PARALLEL is true re: https://github.com/Unidata/netcdf-c/issues/2315 Ed notes that this test hangs when running parallel. The test is attempting to create a very large in-memory file, which is the proximate cause. But no idea what's the underlying cause.
207 lines
4.8 KiB
C
207 lines
4.8 KiB
C
#ifdef HAVE_CONFIG_H
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#include <config.h>
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#endif
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#include <stdlib.h>
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#include <stdio.h>
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#include <string.h>
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#include <assert.h>
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#ifdef HAVE_GETOPT_H
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#include <getopt.h>
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#endif
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#if defined(_WIN32) && ! defined(__MINGW32__)
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#include "XGetopt.h"
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#endif
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#include <netcdf.h>
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#define CHECK(err) {if(err) report(err,__LINE__);}
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/* Command line options */
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struct Options {
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int debug;
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enum What {NONE=0, DIM=1, TYPE=2} what;
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char file[4096];
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char var[NC_MAX_NAME+1];
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char object[NC_MAX_NAME+1];
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} options;
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/**************************************************/
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static void
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report(int err, int lineno)
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{
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fprintf(stderr,"Error: %d: %s\n", lineno, nc_strerror(err));
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exit(1);
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}
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void
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usage(void)
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{
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fprintf(stderr,"usage: printfqn [-D] [-V] -t|-d -v <varname> -f <filename> \n");
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exit(0);
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}
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int
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get_id_parent(int ncid, int id, int* parentp, enum What what)
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{
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int stat = NC_NOERR;
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int i;
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int nids;
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int ids[4096];
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/* Does this group have the id we are searching for? */
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if(what == TYPE) {
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if((stat=nc_inq_typeids(ncid,&nids,ids))) goto done;
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} else if(what == DIM) {
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if((stat=nc_inq_dimids(ncid,&nids,ids,0))) goto done;
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} else
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abort();
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assert(nids < 4096);
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/* Search for this id */
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for(i=0;i<nids;i++) {
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if(ids[i] == id) {
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if(parentp) *parentp = ncid;
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goto done;
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}
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}
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/* Else Search subgroups. */
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if((stat=nc_inq_grps(ncid,&nids,ids))) goto done;
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assert(nids < 4096);
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/* Recurse on each subgroup */
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for(i=0;i<nids;i++) {
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switch (stat = get_id_parent(ids[i],id,parentp,what)) {
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case NC_ENOTFOUND: break; /* not found; keep looking */
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case NC_NOERR: goto done; /* found it */
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default: goto done; /* some other error */
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}
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}
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stat = NC_ENOTFOUND; /* Not found */
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done:
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return stat;
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}
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int
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get_variable_info(int ncid, const char* name, int* gidp, int* vidp, int* tidp, int* ndimsp, int* dimids)
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{
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int stat = NC_NOERR;
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int i;
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int nids;
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int ids[4096];
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char varname[NC_MAX_NAME];
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/* Assume only one occurrence of the variable in dataset */
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/* Does this group have the variable we are searching for? */
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if((stat=nc_inq_varids(ncid,&nids,ids))) goto done;
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assert(nids < 4096);
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/* Search for this variable name */
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for(i=0;i<nids;i++) {
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if((stat = nc_inq_varname(ncid,ids[i],varname))) goto done;
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if(strcmp(name,varname)==0) {
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if(gidp) *gidp = ncid;
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if(vidp) *vidp = ids[i];
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if((stat = nc_inq_vartype(ncid,ids[i],tidp))) goto done;
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if((stat = nc_inq_varndims(ncid,ids[i],ndimsp))) goto done;
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if((stat = nc_inq_vardimid(ncid,ids[i],dimids))) goto done;
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goto done;
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}
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}
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/* Else Search subgroups. */
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if((stat=nc_inq_grps(ncid,&nids,ids))) goto done;
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assert(nids < 4096);
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/* Recurse on each subgroup */
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for(i=0;i<nids;i++) {
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switch (stat = get_variable_info(ids[i],name,gidp,vidp,tidp,ndimsp,dimids)) {
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case NC_ENOTVAR: break; /* not found; keep looking */
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case NC_NOERR: goto done; /* found it */
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default: goto done; /* some other error */
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}
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}
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stat = NC_ENOTVAR; /* Not found */
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done:
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return stat;
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}
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int
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main(int argc, char** argv)
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{
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int ncid, varid, gid, tid;
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size_t fqnlen, namelen;
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char fqn[4096];
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char name[NC_MAX_NAME];
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int ndims;
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int dimids[NC_MAX_VAR_DIMS];
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int c;
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memset((void*)&options,0,sizeof(options));
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while ((c = getopt(argc, argv, "DVdtv:f:")) != EOF) {
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switch(c) {
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case 'D':
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options.debug = 1;
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break;
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case 'V':
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usage();
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break;
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case 'd':
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options.what = DIM;
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break;
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case 't':
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options.what = TYPE;
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break;
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case 'v':
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strcpy(options.var,optarg);
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break;
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case 'f':
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strcpy(options.file,optarg);
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break;
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case ':':
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fprintf(stderr,"option has no argument: %c\n",c);
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usage();
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case '?':
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fprintf(stderr,"unknown option\n");
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usage();
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}
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}
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CHECK(nc_open(options.file,NC_NETCDF4,&ncid));
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/* Locate the parent group for the variable */
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CHECK(get_variable_info(ncid,options.var,&gid,&varid,&tid,&ndims,dimids));
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if(options.what == TYPE) {
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/* Get the simple type name from the variable */
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CHECK(nc_inq_type(ncid,tid,name,&namelen));
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/* Get the containing group id for the type (might not be same as ncid) */
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CHECK(get_id_parent(ncid,tid,&gid,TYPE));
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} else if(options.what == DIM) {
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/* get name of dimids[0] from the variable */
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CHECK(nc_inq_dimname(ncid,dimids[0],name));
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/* Get the containing group id for the type */
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CHECK(get_id_parent(ncid,dimids[0],&gid,DIM));
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}
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/* Get the FQN name for the containing group of the id */
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CHECK(nc_inq_grpname_full(gid,&fqnlen,fqn));
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assert(fqnlen < sizeof(fqn));
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if(strcmp(fqn,"/")==0) fqn[0] = '\0';
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/* report result with no newline */
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printf("%s/%s",fqn,name);
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return 0;
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}
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