netcdf-c/libhdf5
Dennis Heimbigner 1552d894a2 Cleanup a number of issues.
re: Issue https://github.com/Unidata/netcdf-c/issues/2748

This PR fixes a number of issues and bugs.

## s3cleanup fixes
* Delete extraneous s3cleanup.sh related files.
* Remove duplicate s3cleanup.uids entries.

## Support the Google S3 API
* Add code to recognize "storage.gooleapis.com"
* Add extra code to track the kind of server being accessed: unknown, Amazon, Google.
* Add a new mode flag "gs3" (analog to "s3") to support this api.
* Modify the S3 URL code to support this case.
* Modify the listobjects result parsing because Google returns some non-standard XML elements.
* Change signature and calls for NC_s3urlrebuild.

## Handle corrupt Zarr files where shape is empty for a variable.
Modify behavior when a variable's "shape" dictionary entry.
Previously it returned an error, but now it suppresses such a variable.
This change makes it possible to read non-corrupt data from the file.
Also added a test case.

## Misc. Other Changes
* Fix the nclog level handling to suppress output by default.
* Fix de-duplicates code in ncuri.c
* Restore testing of iridl.ldeo.columbia.edu.
* Fix bug in define_vars() which did not always do a proper reclaim between variables.
2023-10-08 11:22:52 -06:00
..
CMakeLists.txt CMake: Ensure all libraries link against MPI if needed 2023-10-02 10:31:24 +01:00
H5FDhttp.c Improve S3 Documentation and Support 2023-04-25 17:15:06 -06:00
H5FDhttp.h Merge branch 'main' into vfd13.dmh 2023-03-14 11:36:09 -06:00
hdf5attr.c Improve performance of the nc_reclaim_data and nc_copy_data functions. 2023-05-20 17:11:25 -06:00
hdf5create.c Merge branch 'dimscale_attachement_optional' of https://github.com/gsjaardema/netcdf-c into gh2161.wif 2022-04-19 11:06:34 -06:00
hdf5debug.c Improve S3 Documentation and Support 2023-04-25 17:15:06 -06:00
hdf5debug.h Mitigate S3 test interference + Unlimited Dimensions in NCZarr 2023-09-26 16:56:48 -06:00
hdf5dim.c fixing issues with dimlens of unlitmited dims in complex situations 2022-05-29 15:22:10 +03:00
hdf5dispatch.c Enhance/Fix filter support 2022-03-14 12:39:37 -06:00
hdf5err.h Additional Fixes to NCZarr 2020-12-16 20:48:02 -07:00
hdf5file.c Improve S3 Documentation and Support 2023-04-25 17:15:06 -06:00
hdf5filter.c Enhance/Fix filter support 2022-03-14 12:39:37 -06:00
hdf5grp.c Provide a Number of fixes/improvements to NCZarr 2020-11-19 17:01:04 -07:00
hdf5internal.c Improve performance of the nc_reclaim_data and nc_copy_data functions. 2023-05-20 17:11:25 -06:00
hdf5open.c Cleanup a number of issues. 2023-10-08 11:22:52 -06:00
hdf5set_format_compatibility.c hdf5set_format_compatibility.c: Function docs. 2022-02-01 09:58:36 -07:00
hdf5type.c Improve performance of the nc_reclaim_data and nc_copy_data functions. 2023-05-20 17:11:25 -06:00
hdf5var.c Improve performance of the nc_reclaim_data and nc_copy_data functions. 2023-05-20 17:11:25 -06:00
Makefile.am Format compatibility when re-opening files 2022-01-07 18:34:52 -07:00
nc4hdf.c Cleanup the handling of cache parameters. 2023-08-10 16:57:57 -06:00
nc4info.c Remove need for HDF5-1.6 API being defined 2021-04-28 13:59:24 -06:00
nc4mem.c
nc4memcb.c hand over udata to h5->mem a little earlier 2021-08-26 16:12:24 +02:00