mirror of
https://github.com/Unidata/netcdf-c.git
synced 2024-11-27 07:30:33 +08:00
f6e25b695e
re: https://github.com/Unidata/netcdf-c/issues/2117 re: https://github.com/Unidata/netcdf-c/issues/2119 * Modify libsrc to allow byte-range reading of netcdf-3 files in private S3 buckets; this required using the aws sdk. Also add a test case. * The aws sdk can sometimes cause problems if the Awd::ShutdownAPI function is not called. So at optional atexit() support to ensure it is called. This is disabled for Windows. * Add documentation to nczarr.md on how to build and use the aws sdk under windows. Currently it builds, but testing fails. * Switch testing from stratus to the Unidata bucket on S3. * Improve support for the s3: url protocol. * Add a s3 specific utility code file: ds3util.c * Modify NC_infermodel to attempt to read the magic number of byte-ranged files in S3. ## Misc. * Move and rename the core S3 SDK wrapper code (libnczarr/zs3sdk.cpp) to libdispatch since it now used in libsrc as well as libnczarr. * Add calls to nc_finalize in the utilities in case atexit is disabled. * Add header only json parser to the distribution rather than as a built source.
385 lines
13 KiB
CMake
385 lines
13 KiB
CMake
# Copyright 1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
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# 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014,
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# 2015, 2016, 2017, 2018
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# University Corporation for Atmospheric Research/Unidata.
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# See netcdf-c/COPYRIGHT file for more info.
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#IF(BUILD_SHARED_LIBS AND WIN32)
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# remove_definitions(-DDLL_EXPORT)
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# remove_definitions(-DDLL_NETCDF)
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#ENDIF()
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SET(RCMERGE OFF)
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SET(ncdump_FILES ncdump.c vardata.c dumplib.c indent.c nctime0.c utils.c nciter.c)
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SET(nccopy_FILES nccopy.c nciter.c chunkspec.c utils.c dimmap.c list.c)
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SET(ocprint_FILES ocprint.c)
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SET(ncvalidator_FILES ncvalidator.c)
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SET(printfqn_FILES printfqn.c)
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SET(ncpathcvt_FILES ncpathcvt.c)
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IF(USE_X_GETOPT)
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SET(ncdump_FILES ${ncdump_FILES} XGetopt.c)
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SET(nccopy_FILES ${nccopy_FILES} XGetopt.c)
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SET(ocprint_FILES ${ocprint_FILES} XGetopt.c)
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SET(ncvalidator_FILES ${ncvalidator_FILES} XGetopt.c)
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SET(printfqn_FILES ${printfqn_FILES} XGetopt.c)
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SET(ncpathcvt_FILES ${ncpathcvt_FILES} XGetopt.c)
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ENDIF(USE_X_GETOPT)
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ADD_EXECUTABLE(ncdump ${ncdump_FILES})
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ADD_EXECUTABLE(nccopy ${nccopy_FILES})
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ADD_EXECUTABLE(ncvalidator ${ncvalidator_FILES})
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ADD_EXECUTABLE(ncpathcvt ${ncpathcvt_FILES})
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IF(USE_HDF5)
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ADD_EXECUTABLE(nc4print nc4print.c nc4printer.c)
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ADD_EXECUTABLE(printfqn ${printfqn_FILES})
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ENDIF(USE_HDF5)
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IF(ENABLE_DAP)
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ADD_EXECUTABLE(ocprint ${ocprint_FILES})
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ENDIF(ENABLE_DAP)
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TARGET_LINK_LIBRARIES(ncdump netcdf ${ALL_TLL_LIBS})
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TARGET_LINK_LIBRARIES(nccopy netcdf ${ALL_TLL_LIBS})
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TARGET_LINK_LIBRARIES(ncvalidator netcdf ${ALL_TLL_LIBS})
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TARGET_LINK_LIBRARIES(ncpathcvt netcdf ${ALL_TLL_LIBS})
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IF(USE_HDF5)
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TARGET_LINK_LIBRARIES(nc4print netcdf ${ALL_TLL_LIBS})
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TARGET_LINK_LIBRARIES(printfqn netcdf ${ALL_TLL_LIBS})
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ENDIF(USE_HDF5)
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IF(ENABLE_DAP)
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TARGET_LINK_LIBRARIES(ocprint netcdf ${ALL_TLL_LIBS})
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ENDIF(ENABLE_DAP)
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####
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# We have to do a little tweaking
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# to remove the Release/ and Debug/ directories
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# in MSVC builds. This is required to get
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# test scripts to work.
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####
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IF(MSVC)
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SET_TARGET_PROPERTIES(ncdump PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ncdump PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ncdump PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(nccopy PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(nccopy PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(nccopy PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ncvalidator PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ncvalidator PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ncvalidator PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ncpathcvt PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ncpathcvt PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ncpathcvt PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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IF(USE_HDF5)
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SET_TARGET_PROPERTIES(printfqn PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(printfqn PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(printfqn PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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ENDIF(USE_HDF5)
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IF(ENABLE_DAP)
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SET_TARGET_PROPERTIES(ocprint PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ocprint PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(ocprint PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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ENDIF(ENABLE_DAP)
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ENDIF()
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IF(ENABLE_TESTS)
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ADD_EXECUTABLE(rewrite-scalar rewrite-scalar.c)
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ADD_EXECUTABLE(bom bom.c)
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ADD_EXECUTABLE(tst_dimsizes tst_dimsizes.c)
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ADD_EXECUTABLE(nctrunc nctrunc.c)
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if(RCMERGE)
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ADD_EXECUTABLE(tst_rcmerge tst_rcmerge.c)
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endif()
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TARGET_LINK_LIBRARIES(rewrite-scalar netcdf)
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TARGET_LINK_LIBRARIES(bom netcdf)
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TARGET_LINK_LIBRARIES(tst_dimsizes netcdf)
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TARGET_LINK_LIBRARIES(nctrunc netcdf)
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if(RCMERGE)
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TARGET_LINK_LIBRARIES(tst_rcmerge netcdf)
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endif()
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IF(USE_HDF5)
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ADD_EXECUTABLE(tst_fileinfo tst_fileinfo.c)
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TARGET_LINK_LIBRARIES(tst_fileinfo netcdf)
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ENDIF()
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IF(MSVC)
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SET_TARGET_PROPERTIES(rewrite-scalar PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(rewrite-scalar PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(rewrite-scalar PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(bom PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(bom PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(bom PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(tst_dimsizes PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(tst_dimsizes PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(tst_dimsizes PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(nctrunc PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(nctrunc PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(nctrunc PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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IF(RCMERGE)
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SET_TARGET_PROPERTIES(tst_rcmerge PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(tst_rcmerge PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(tst_rcmerge PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE ${CMAKE_CURRENT_BINARY_DIR})
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endif()
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IF(USE_HDF5)
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SET_TARGET_PROPERTIES(tst_fileinfo PROPERTIES RUNTIME_OUTPUT_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(tst_fileinfo PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
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${CMAKE_CURRENT_BINARY_DIR})
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SET_TARGET_PROPERTIES(tst_fileinfo PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
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${CMAKE_CURRENT_BINARY_DIR})
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ENDIF(USE_HDF5)
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ENDIF(MSVC)
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# Base tests
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# The tests are set up as a combination of shell scripts and executables that
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# must be run in a particular order. It is painful but will use macros to help
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# keep it from being too bad.
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## Start adding tests in the appropriate order
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add_sh_test(ncdump run_tests)
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add_sh_test(ncdump tst_64bit)
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add_bin_test_no_prefix(ref_ctest)
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add_bin_test_no_prefix(ref_ctest64)
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add_sh_test(ncdump tst_output)
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add_sh_test(ncdump tst_lengths)
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add_sh_test(ncdump tst_calendars)
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build_bin_test_no_prefix(tst_utf8)
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add_sh_test(ncdump run_utf8_tests)
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IF(USE_HDF5)
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add_sh_test(ncdump run_utf8_nc4_tests)
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add_sh_test(ncdump tst_fileinfo)
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add_sh_test(ncdump tst_hdf5_offset)
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ENDIF(USE_HDF5)
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add_sh_test(ncdump tst_null_byte_padding)
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IF(USE_STRICT_NULL_BYTE_HEADER_PADDING)
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SET_TESTS_PROPERTIES(ncdump_tst_null_byte_padding PROPERTIES WILL_FAIL TRUE)
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ENDIF(USE_STRICT_NULL_BYTE_HEADER_PADDING)
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add_sh_test(ncdump tst_nccopy3)
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IF(HAVE_BASH)
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SET_TESTS_PROPERTIES(ncdump_tst_nccopy3 PROPERTIES RUN_SERIAL TRUE)
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ENDIF(HAVE_BASH)
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add_sh_test(ncdump tst_nccopy3_subset)
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add_sh_test(ncdump tst_charfill)
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add_sh_test(ncdump tst_formatx3)
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add_sh_test(ncdump tst_bom)
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add_sh_test(ncdump tst_dimsizes)
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# The following test script invokes
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# gcc directly.
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IF(CMAKE_COMPILER_IS_GNUCC OR APPLE)
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IF(ENABLE_LARGE_FILE_TESTS)
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add_sh_test(ncdump tst_iter)
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ENDIF(ENABLE_LARGE_FILE_TESTS)
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ENDIF(CMAKE_COMPILER_IS_GNUCC OR APPLE)
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add_sh_test(ncdump tst_inmemory_nc3)
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add_sh_test(ncdump tst_nccopy_w3)
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IF(USE_HDF5)
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add_sh_test(ncdump tst_inmemory_nc4)
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add_sh_test(ncdump tst_nccopy_w4)
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ENDIF(USE_HDF5)
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IF(USE_HDF5)
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build_bin_test_no_prefix(tst_create_files)
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build_bin_test_no_prefix(tst_group_data)
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build_bin_test_no_prefix(tst_enum_data)
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build_bin_test_no_prefix(tst_opaque_data)
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build_bin_test_no_prefix(tst_string_data)
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build_bin_test_no_prefix(tst_vlen_data)
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build_bin_test_no_prefix(tst_comp)
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build_bin_test_no_prefix(tst_comp2)
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build_bin_test_no_prefix(tst_nans)
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build_bin_test_no_prefix(tst_h_scalar)
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add_sh_test(ncdump tst_formatx4)
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# Add this test by hand, as it is also called from a script.
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# Editing the script would break autotools compatibility.
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build_bin_test_no_prefix(tst_special_atts)
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build_bin_test_no_prefix(tst_compress)
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build_bin_test_no_prefix(tst_chunking)
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###
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# This test fails on Visual Studio builds with bash.
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# It passes, but technically fails because the scientific
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# formatting omits a 0.
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###
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IF(EXTRA_TESTS)
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add_sh_test(ncdump run_back_comp_tests)
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IF(MSVC)
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SET_TESTS_PROPERTIES(ncdump_run_back_comp_tests PROPERTIES WILL_FAIL TRUE)
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ENDIF(MSVC)
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ENDIF(EXTRA_TESTS)
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# Known failure on MSVC; the number of 0's padding
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# is different, but the result is actually correct.
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IF(HAVE_BASH)
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add_sh_test(ncdump tst_netcdf4)
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build_bin_test_no_prefix(tst_h_rdc0)
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ENDIF()
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build_bin_test_no_prefix(tst_fillbug)
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add_sh_test(ncdump_sh tst_fillbug)
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add_sh_test(ncdump tst_netcdf4_4)
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IF(MSVC AND HAVE_BASH)
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SET_TESTS_PROPERTIES(ncdump_tst_netcdf4_4 PROPERTIES WILL_FAIL TRUE)
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ENDIF(MSVC AND HAVE_BASH)
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###
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# Some test reordering was required to ensure these tests
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# only ran after ncdump was built.
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###
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add_sh_test(ncdump run_ncgen_tests)
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IF(USE_HDF5)
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add_sh_test(ncdump run_ncgen_nc4_tests)
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ENDIF(USE_HDF5)
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add_sh_test(ncdump tst_grp_spec)
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add_sh_test(ncdump tst_mud)
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add_sh_test(ncdump_shell tst_h_scalar)
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add_sh_test(ncdump tst_nccopy4)
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IF(HAVE_BASH)
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SET_TESTS_PROPERTIES(ncdump_tst_nccopy4 PROPERTIES RUN_SERIAL TRUE)
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ENDIF(HAVE_BASH)
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add_sh_test(ncdump tst_nccopy5)
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IF(HAVE_BASH)
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SET_TESTS_PROPERTIES(ncdump_tst_nccopy5 PROPERTIES RUN_SERIAL TRUE)
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ENDIF(HAVE_BASH)
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IF(USE_HDF5)
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add_sh_test(ncdump tst_ncgen4)
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ENDIF(USE_HDF5)
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ENDIF(USE_HDF5)
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add_sh_test(ncdump tst_inttags)
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IF(USE_HDF5)
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add_sh_test(ncdump tst_inttags4)
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ENDIF(USE_HDF5)
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add_sh_test(ncdump test_radix)
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add_sh_test(ncdump tst_ctests)
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IF(ENABLE_UNFIXED_MEMORY_LEAKS)
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SET_TESTS_PROPERTIES(ncdump_run_ncgen_nc4_tests.sh ncdump_tst_nccopy4.sh ncdump_tst_ncgen_shared.sh ncdump_tst_netcdf4.sh
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PROPERTIES ENVIRONMENT NC_VLEN_NOTEST=1)
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ENDIF()
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# The unicode tests are complicated
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IF(USE_HDF5)
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IF(HAVE_BASH)
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build_bin_test_no_prefix(tst_unicode)
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IF(NOT MSVC)
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# These tests do not work under windows
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add_sh_test(ncdump test_unicode_directory)
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add_sh_test(ncdump test_unicode_path)
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ENDIF(NOT MSVC)
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ENDIF(HAVE_BASH)
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ENDIF(USE_HDF5)
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IF(USE_CDF5)
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add_sh_test(ncdump test_keywords)
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ENDIF()
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IF(USE_HDF5)
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add_sh_test(ncdump test_scope)
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ENDIF()
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if(RCMERGE)
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add_sh_test(ncdump test_rcmerge)
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endif()
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ENDIF(ENABLE_TESTS)
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#IF(MSVC)
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# SET_TARGET_PROPERTIES(ncdump
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# PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
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# )
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# SET_TARGET_PROPERTIES(nccopy
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# PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
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# )
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# SET_TARGET_PROPERTIES(ncvalidator
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# PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
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# )
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# IF(ENABLE_DAP)
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# SET_TARGET_PROPERTIES(ocprint
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# PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
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# )
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# ENDIF(ENABLE_DAP)
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#ENDIF()
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INSTALL(TARGETS ncdump RUNTIME DESTINATION bin COMPONENT utilities)
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INSTALL(TARGETS nccopy RUNTIME DESTINATION bin COMPONENT utilities)
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SET(MAN_FILES nccopy.1 ncdump.1)
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# Note, the L512.bin file is file containing exactly 512 bytes each of value 0.
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# It is used for creating hdf5 files with varying offsets for testing.
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FILE(GLOB COPY_FILES ${CMAKE_BINARY_DIR}/ncgen/*.nc ${CMAKE_BINARY_DIR}/nc_test4/*.nc ${CMAKE_CURRENT_SOURCE_DIR}/*.ncml ${CMAKE_CURRENT_SOURCE_DIR}/*.nc ${CMAKE_CURRENT_SOURCE_DIR}/*.cdl ${CMAKE_CURRENT_SOURCE_DIR}/*.sh ${CMAKE_CURRENT_SOURCE_DIR}/*.1 ${CMAKE_CURRENT_SOURCE_DIR}/L512.bin ${CMAKE_CURRENT_SOURCE_DIR}/ref_ctest*.c )
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FILE(COPY ${COPY_FILES} DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/ FILE_PERMISSIONS OWNER_WRITE OWNER_READ OWNER_EXECUTE)
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ADD_SUBDIRECTORY(cdl)
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ADD_SUBDIRECTORY(expected)
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SET_DIRECTORY_PROPERTIES(PROPERTIES ADDITIONAL_MAKE_CLEAN_FILES "${CLEANFILES}")
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IF(NOT MSVC)
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INSTALL(FILES ${MAN_FILES} DESTINATION "share/man/man1" COMPONENT documentation)
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ENDIF()
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