/* Copyright 2009, UCAR/Unidata See COPYRIGHT file for copying and redistribution conditions. This program tests netcdf-4 parallel I/O. $Id: tst_parallel.c,v 1.7 2009/08/19 15:58:57 ed Exp $ */ /* Defining USE_MPE causes the MPE trace library to be used (and you * must also relink with -llmpe -lmpe). This causes clog2 output to be * written, which can be converted to slog2 (by the program * clog2TOslog2) and then used in the analysis program jumpshot. */ /*#define USE_MPE 1*/ #include #include "err_macros.h" #include #ifdef USE_MPE #include #endif /* USE_MPE */ #define FILE "tst_parallel.nc" #define NDIMS 3 #define DIMSIZE 24 #define QTR_DATA (DIMSIZE * DIMSIZE / 4) #define NUM_PROC 4 #define NUM_SLABS 10 int main(int argc, char **argv) { /* MPI stuff. */ int mpi_namelen; char mpi_name[MPI_MAX_PROCESSOR_NAME]; int mpi_size, mpi_rank; MPI_Comm comm = MPI_COMM_WORLD; MPI_Info info = MPI_INFO_NULL; /* Netcdf-4 stuff. */ int ncid, v1id, dimids[NDIMS]; size_t start[NDIMS], count[NDIMS]; int data[DIMSIZE * DIMSIZE], i, res; int slab_data[DIMSIZE * DIMSIZE / 4]; /* one slab */ char file_name[NC_MAX_NAME + 1]; #ifdef USE_MPE int s_init, e_init, s_define, e_define, s_write, e_write, s_close, e_close; #endif /* USE_MPE */ /* Initialize MPI. */ MPI_Init(&argc,&argv); MPI_Comm_size(MPI_COMM_WORLD, &mpi_size); MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank); MPI_Get_processor_name(mpi_name, &mpi_namelen); /*printf("mpi_name: %s size: %d rank: %d\n", mpi_name, mpi_size, mpi_rank);*/ #ifdef USE_MPE MPE_Init_log(); s_init = MPE_Log_get_event_number(); e_init = MPE_Log_get_event_number(); s_define = MPE_Log_get_event_number(); e_define = MPE_Log_get_event_number(); s_write = MPE_Log_get_event_number(); e_write = MPE_Log_get_event_number(); s_close = MPE_Log_get_event_number(); e_close = MPE_Log_get_event_number(); MPE_Describe_state(s_init, e_init, "Init", "red"); MPE_Describe_state(s_define, e_define, "Define", "yellow"); MPE_Describe_state(s_write, e_write, "Write", "green"); MPE_Describe_state(s_close, e_close, "Close", "purple"); MPE_Start_log(); MPE_Log_event(s_init, 0, "start init"); #endif /* USE_MPE */ if (mpi_rank == 1) { printf("\n*** tst_parallel testing very basic parallel access.\n"); printf("*** tst_parallel testing whether we can create file for parallel access and write to it..."); } /* Create phony data. We're going to write a 24x24 array of ints, in 4 sets of 144. */ /*printf("mpi_rank*QTR_DATA=%d (mpi_rank+1)*QTR_DATA-1=%d\n", mpi_rank*QTR_DATA, (mpi_rank+1)*QTR_DATA);*/ for (i = mpi_rank * QTR_DATA; i < (mpi_rank + 1) * QTR_DATA; i++) data[i] = mpi_rank; for (i = 0; i < DIMSIZE * DIMSIZE / 4; i++) slab_data[i] = mpi_rank; #ifdef USE_MPE MPE_Log_event(e_init, 0, "end init"); MPE_Log_event(s_define, 0, "start define file"); #endif /* USE_MPE */ /* Create a parallel netcdf-4 file. */ /*nc_set_log_level(3);*/ sprintf(file_name, "%s/%s", TEMP_LARGE, FILE); if ((res = nc_create_par(file_name, NC_NETCDF4|NC_MPIIO, comm, info, &ncid))) ERR; /* Create three dimensions. */ if (nc_def_dim(ncid, "d1", DIMSIZE, dimids)) ERR; if (nc_def_dim(ncid, "d2", DIMSIZE, &dimids[1])) ERR; if (nc_def_dim(ncid, "d3", NUM_SLABS, &dimids[2])) ERR; /* Create one var. */ if ((res = nc_def_var(ncid, "v1", NC_INT, NDIMS, dimids, &v1id))) ERR; /* Write metadata to file. */ if ((res = nc_enddef(ncid))) ERR; #ifdef USE_MPE MPE_Log_event(e_define, 0, "end define file"); if (mpi_rank) sleep(mpi_rank); #endif /* USE_MPE */ /* Set up slab for this process. */ start[0] = mpi_rank * DIMSIZE/mpi_size; start[1] = 0; count[0] = DIMSIZE/mpi_size; count[1] = DIMSIZE; count[2] = 1; /*printf("mpi_rank=%d start[0]=%d start[1]=%d count[0]=%d count[1]=%d\n", mpi_rank, start[0], start[1], count[0], count[1]);*/ if (nc_var_par_access(ncid, v1id, NC_COLLECTIVE)) ERR; /* if (nc_var_par_access(ncid, v1id, NC_INDEPENDENT)) ERR;*/ for (start[2] = 0; start[2] < NUM_SLABS; start[2]++) { #ifdef USE_MPE MPE_Log_event(s_write, 0, "start write slab"); #endif /* USE_MPE */ /* Write slabs of phoney data. */ if (nc_put_vara_int(ncid, v1id, start, count, slab_data)) ERR; #ifdef USE_MPE MPE_Log_event(e_write, 0, "end write file"); #endif /* USE_MPE */ } #ifdef USE_MPE MPE_Log_event(s_close, 0, "start close file"); #endif /* USE_MPE */ /* Close the netcdf file. */ if ((res = nc_close(ncid))) ERR; #ifdef USE_MPE MPE_Log_event(e_close, 0, "end close file"); #endif /* USE_MPE */ /* Delete this large file. */ remove(file_name); /* Shut down MPI. */ MPI_Finalize(); if (mpi_rank == 1) { SUMMARIZE_ERR; FINAL_RESULTS; } return 0; }