/* This is part of the netCDF package. Copyright 2005 University Corporation for Atmospheric Research/Unidata See COPYRIGHT file for conditions of use. See www.unidata.ucar.edu for more info. Test small files. $Id: tst_small.c 2796 2014-10-28 03:40:29Z wkliao $ */ #include "config.h" #include #include "err_macros.h" #include #ifdef USE_PNETCDF #include #endif /* Test everything for classic, 64-bit offset, 64-bit data files. If netcdf-4 is * included, that means another whole round of testing. */ #define NUM_FORMATS (5) #define ATT_NAME "Atom" #define MAX_LEN 7 #define ERR2 { \ err++; \ fprintf(stderr, "Sorry! Unexpected result, %s, line: %d (%s)\n", \ __FILE__, __LINE__, nc_strerror(stat)); \ exit(1); \ } #ifdef USE_PNETCDF #define FMTCHECK {\ int format; \ nc_inq_format_extended(ncid,&format,NULL); \ if (format == NC_FORMATX_PNETCDF) { \ if (nc_var_par_access(ncid, varid, NC_COLLECTIVE)) ERR;\ }\ } #else #define FMTCHECK #endif static int file_create(const char *filename, int cmode, int *ncid) { int err; /* get the default file format */ int default_format; nc_set_default_format(NC_FORMAT_CLASSIC, &default_format); /* set it back to the default */ nc_set_default_format(default_format, NULL); #ifdef USE_PNETCDF if (default_format == NC_FORMAT_CLASSIC || default_format == NC_FORMAT_64BIT_OFFSET #ifdef USE_CDF5 || default_format == NC_FORMAT_64BIT_DATA #endif ) err = nc_create_par(filename, cmode|NC_PNETCDF, MPI_COMM_WORLD, MPI_INFO_NULL, ncid); else #endif err = nc_create(filename, cmode, ncid); return err; } static int file_open(const char *filename, int omode, int *ncid) { int err; /* get the default file format */ int default_format; err = nc_set_default_format(NC_FORMAT_CLASSIC, &default_format); /* set it back to the default */ err = nc_set_default_format(default_format, NULL); #ifdef USE_PNETCDF if (default_format == NC_FORMAT_CLASSIC || default_format == NC_FORMAT_64BIT_OFFSET || default_format == NC_FORMAT_64BIT_DATA) err = nc_open_par(filename, omode|NC_PNETCDF, MPI_COMM_WORLD, MPI_INFO_NULL, ncid); else #endif err = nc_open(filename, omode, ncid); return err; } static int test_small_atts(const char *testfile) { int ncid; char att[MAX_LEN + 1], att_in[MAX_LEN + 1], source[MAX_LEN + 1] = "0123456"; int ndims, nvars, natts, unlimdimid; size_t len_in; int t, f; /* Run this with and without fill mode. */ for (f = 0; f < 2; f++) { /* Create small files with an attribute that grows by one each * time. */ for (t = 1; t < MAX_LEN; t++) { /* Create null-terminated text string of correct length. */ strncpy(att, source, t); att[t] = '\0'; /* Create a file with one attribute. */ if (file_create(testfile, NC_CLOBBER, &ncid)) ERR; if (nc_put_att_text(ncid, NC_GLOBAL, ATT_NAME, t + 1, att)) ERR; if (f && nc_set_fill(ncid, NC_NOFILL, NULL)) ERR; if (nc_close(ncid)) ERR; /* Reopen the file and check it. */ if (file_open(testfile, NC_NOWRITE, &ncid)) ERR; if (nc_inq(ncid, &ndims, &nvars, &natts, &unlimdimid)) ERR; if (ndims != 0 && nvars != 0 && natts != 1 && unlimdimid != -1) ERR; if (nc_inq_attlen(ncid, NC_GLOBAL, ATT_NAME, &len_in)) ERR; if (len_in != t + 1) ERR; if (nc_get_att_text(ncid, NC_GLOBAL, ATT_NAME, att_in)) ERR; if (strncmp(att_in, att, t)) ERR; if (nc_close(ncid)) ERR; } } return 0; } #define DIM1_NAME "Time" #define DIM2_NAME "DataStrLen" #define VAR_NAME "Times" #define STR_LEN 19 #define NUM_VALS 2 #define NDIMS 2 #define TITLE " OUTPUT FROM WRF V2.0.3.1 MODEL" #define ATT_NAME2 "TITLE" /* Test a small file with an unlimited dimension. NOTE: Normally I * write a NULL terminator for my attributes and text strings, but * this reproduces a bug that a fortran user sent us. So string data * are written to the file without null terminators. - Ed */ static int test_small_unlim(const char *testfile) { int ncid, dimids[NDIMS], varid, stat; char data[NUM_VALS][STR_LEN + 1], data_in[NUM_VALS][STR_LEN]; int ndims, nvars, natts, unlimdimid; size_t i, start[NDIMS], count[NDIMS]; /* Create null-terminated text strings of correct length. */ /*for (i = 0; i < NUM_VALS; i++) strcpy(data[i], source);*/ strcpy(data[0], "2005-04-11_12:00:00"); strcpy(data[1], "2005-04-11_13:00:00"); /* Create a file with two dimensions, one unlimited, and one * var, and a global att. */ if (file_create(testfile, NC_CLOBBER, &ncid)) ERR; if (nc_def_dim(ncid, DIM1_NAME, NC_UNLIMITED, dimids)) ERR; if (nc_def_dim(ncid, DIM2_NAME, STR_LEN, &dimids[1])) ERR; if (nc_def_var(ncid, VAR_NAME, NC_CHAR, 2, dimids, &varid)) ERR; if (nc_put_att_text(ncid, NC_GLOBAL, ATT_NAME2, strlen(TITLE), TITLE)) ERR; if (nc_enddef(ncid)) ERR; /* Write some records of var data. */ count[0] = 1; count[1] = STR_LEN; start[1] = 0; FMTCHECK; for (start[0] = 0; start[0] < NUM_VALS; start[0]++) if ((stat=nc_put_vara_text(ncid, varid, start, count, data[start[0]]))!=NC_NOERR) ERR2; /* We're done! */ if (nc_close(ncid)) ERR; /* Reopen the file and check it. */ if (file_open(testfile, NC_NOWRITE, &ncid)) ERR; if (nc_inq(ncid, &ndims, &nvars, &natts, &unlimdimid)) ERR; if (ndims != 2 && nvars != 1 && natts != 0 && unlimdimid != 0) ERR; if (nc_get_var_text(ncid, varid, (char *)data_in)) ERR; for (i = 0; i < NUM_VALS; i++) if (strncmp(data[i], data_in[i], STR_LEN)) ERR; if (nc_close(ncid)) ERR; return 0; } /* Test a small file with a fixed dimension. */ static int test_small_fixed(const char *testfile) { int ncid, dimids[NDIMS], varid; char data[NUM_VALS][STR_LEN + 1], data_in[NUM_VALS][STR_LEN]; int ndims, nvars, natts, unlimdimid; size_t i, start[NDIMS], count[NDIMS]; /* Create null-terminated text strings of correct length. */ /*for (i = 0; i < NUM_VALS; i++) strcpy(data[i], source);*/ strcpy(data[0], "2005-04-11_12:00:00"); strcpy(data[1], "2005-04-11_13:00:00"); /* Create a file with two dimensions, one unlimited, and one * var, and a global att. */ if (file_create(testfile, NC_CLOBBER, &ncid)) ERR; if (nc_def_dim(ncid, DIM1_NAME, NUM_VALS, dimids)) ERR; if (nc_def_dim(ncid, DIM2_NAME, STR_LEN, &dimids[1])) ERR; if (nc_def_var(ncid, VAR_NAME, NC_CHAR, NDIMS, dimids, &varid)) ERR; if (nc_put_att_text(ncid, NC_GLOBAL, ATT_NAME2, strlen(TITLE), TITLE)) ERR; if (nc_enddef(ncid)) ERR; /* Write some records of var data. */ count[0] = 1; count[1] = STR_LEN; start[1] = 0; for (start[0] = 0; start[0] < NUM_VALS; start[0]++) if (nc_put_vara_text(ncid, varid, start, count, data[start[0]])) ERR; /* We're done! */ if (nc_close(ncid)) ERR; /* Reopen the file and check it. */ if (file_open(testfile, NC_NOWRITE, &ncid)) ERR; if (nc_inq(ncid, &ndims, &nvars, &natts, &unlimdimid)) ERR; if (ndims != 2 && nvars != 1 && natts != 0 && unlimdimid != -1) ERR; if (nc_get_var_text(ncid, varid, (char *)data_in)) ERR; for (i = 0; i < NUM_VALS; i++) if (strncmp(data[i], data_in[i], STR_LEN)) ERR; if (nc_close(ncid)) ERR; return 0; } /* Test a small file with one var. */ static int test_small_one(const char *testfile) { int ncid, dimid, varid; char data = 'h', data_in; int ndims, nvars, natts, unlimdimid; size_t start[NDIMS], count[NDIMS]; /* Create a file with one ulimited dimensions, and one var. */ if (file_create(testfile, NC_CLOBBER, &ncid)) ERR; if (nc_def_dim(ncid, DIM1_NAME, NC_UNLIMITED, &dimid)) ERR; if (nc_def_var(ncid, VAR_NAME, NC_CHAR, 1, &dimid, &varid)) ERR; if (nc_enddef(ncid)) ERR; /* Write one record of var data, a single character. */ count[0] = 1; start[0] = 0; FMTCHECK; if (nc_put_vara_text(ncid, varid, start, count, &data)) ERR; /* We're done! */ if (nc_close(ncid)) ERR; /* Reopen the file and check it. */ if (file_open(testfile, NC_NOWRITE, &ncid)) ERR; if (nc_inq(ncid, &ndims, &nvars, &natts, &unlimdimid)) ERR; if (ndims != 1 && nvars != 1 && natts != 0 && unlimdimid != 0) ERR; if (nc_get_var_text(ncid, varid, &data_in)) ERR; if (data_in != data) ERR; if (nc_close(ncid)) ERR; return 0; } #define ONE_DIM 1 #define MAX_RECS 10 /* Test a small file with one record var, which grows. */ static int test_one_growing(const char *testfile) { int ncid, dimid, varid; char data[MAX_RECS], data_in; size_t start[ONE_DIM], count[ONE_DIM], index[ONE_DIM], len_in; int r, f; /* Create some phoney data. */ for (data[0] = 'a', r = 1; r < MAX_RECS; r++) data[r] = data[r - 1] + 1; /* Run this with and without fill mode. */ for (f = 0; f < 2; f++) { /* Create a file with one ulimited dimensions, and one var. */ if (file_create(testfile, NC_CLOBBER, &ncid)) ERR; if (nc_def_dim(ncid, DIM1_NAME, NC_UNLIMITED, &dimid)) ERR; if (nc_def_var(ncid, VAR_NAME, NC_CHAR, 1, &dimid, &varid)) ERR; if (nc_close(ncid)) ERR; /* Normally one would not close and reopen the file for each * record, but I am giving the library a little work-out here... */ for (r = 0; r < MAX_RECS; r++) { /* Write one record of var data, a single character. */ if (file_open(testfile, NC_WRITE, &ncid)) ERR; if (f) { int format; nc_inq_format_extended(ncid,&format,NULL); if (format == NC_FORMATX_PNETCDF) { /* in PnetCDF, nc_set_fill() can only be called in define mode */ if (nc_redef(ncid)) ERR; if (nc_set_fill(ncid, NC_NOFILL, NULL)) ERR; if (nc_enddef(ncid)) ERR; } else { /* test_netcdf4 */ if (nc_set_fill(ncid, NC_NOFILL, NULL)) ERR; } } count[0] = 1; start[0] = r; FMTCHECK; if (nc_put_vara_text(ncid, varid, start, count, &data[r])) ERR; if (nc_close(ncid)) ERR; /* Reopen the file and check it. */ if (file_open(testfile, NC_NOWRITE, &ncid)) ERR; if (nc_inq_dimlen(ncid, 0, &len_in)) ERR; if (len_in != r + 1) ERR; index[0] = r; if (nc_get_var1_text(ncid, 0, index, &data_in)) ERR; if (data_in != data[r]) ERR; if (nc_close(ncid)) ERR; } /* Next record. */ } return 0; } #define ONE_DIM 1 #define MAX_RECS 10 /* Test a small file with one record var, which grows, and has * attributes. */ static int test_one_growing_with_att(const char *testfile) { int ncid, dimid, varid; char data[MAX_RECS], data_in; char att_name[NC_MAX_NAME + 1]; size_t start[ONE_DIM], count[ONE_DIM], index[ONE_DIM], len_in; int r; /* Create a file with one ulimited dimensions, and one var. */ if (file_create(testfile, NC_CLOBBER, &ncid)) ERR; if (nc_def_dim(ncid, DIM1_NAME, NC_UNLIMITED, &dimid)) ERR; if (nc_def_var(ncid, VAR_NAME, NC_CHAR, 1, &dimid, &varid)) ERR; if (nc_close(ncid)) ERR; /* Create some phoney data. */ for (data[0] = 'a', r = 1; r < MAX_RECS; r++) data[r] = data[r - 1] + 1; /* Normally one would not close and reopen the file for each * record, nor add an attribute each time I add a record, but I am * giving the library a little work-out here... */ for (r = 0; r < MAX_RECS; r++) { /* Write one record of var data, a single character. */ if (file_open(testfile, NC_WRITE, &ncid)) ERR; count[0] = 1; start[0] = r; FMTCHECK; if (nc_put_vara_text(ncid, varid, start, count, &data[r])) ERR; sprintf(att_name, "a_%d", data[r]); if (nc_redef(ncid)) ERR; if (nc_put_att_text(ncid, varid, att_name, 1, &data[r])) ERR; if (nc_close(ncid)) ERR; /* Reopen the file and check it. */ if (file_open(testfile, NC_NOWRITE, &ncid)) ERR; if (nc_inq_dimlen(ncid, 0, &len_in)) ERR; if (len_in != r + 1) ERR; index[0] = r; if (nc_get_var1_text(ncid, 0, index, &data_in)) ERR; if (data_in != data[r]) ERR; if (nc_get_att_text(ncid, varid, att_name, &data_in)) ERR; if (data_in != data[r]) ERR; if (nc_close(ncid)) ERR; } /* Next record. */ return 0; } #define VAR_NAME2 "var2" #define NUM_VARS 2 /* Test a small file with two record vars, which grow, and has * attributes added. */ static int test_two_growing_with_att(const char *testfile) { int ncid, dimid, varid[NUM_VARS]; char data[MAX_RECS], data_in; char att_name[NC_MAX_NAME + 1]; size_t start[ONE_DIM], count[ONE_DIM], index[ONE_DIM], len_in; int v, r; /* Create a file with one ulimited dimensions, and one var. */ if (file_create(testfile, NC_CLOBBER, &ncid)) ERR; if (nc_def_dim(ncid, DIM1_NAME, NC_UNLIMITED, &dimid)) ERR; if (nc_def_var(ncid, VAR_NAME, NC_CHAR, 1, &dimid, &varid[0])) ERR; if (nc_def_var(ncid, VAR_NAME2, NC_CHAR, 1, &dimid, &varid[1])) ERR; if (nc_close(ncid)) ERR; /* Create some phoney data. */ for (data[0] = 'a', r = 1; r < MAX_RECS; r++) data[r] = data[r - 1] + 1; /* Normally one would not close and reopen the file for each * record, nor add an attribute each time I add a record, but I am * giving the library a little work-out here... */ for (r = 0; r < MAX_RECS; r++) { /* Write one record of var data, a single character. */ if (file_open(testfile, NC_WRITE, &ncid)) ERR; #ifdef USE_PNETCDF {int format; nc_inq_format_extended(ncid,&format,NULL); if (format == NC_FORMATX_PNETCDF) { for (v = 0; v < NUM_VARS; v++) { if (nc_var_par_access(ncid, varid[v], NC_COLLECTIVE)) ERR; } }} #endif count[0] = 1; start[0] = r; sprintf(att_name, "a_%d", data[r]); for (v = 0; v < NUM_VARS; v++) { if (nc_put_vara_text(ncid, varid[v], start, count, &data[r])) ERR; if (nc_redef(ncid)) ERR; if (nc_put_att_text(ncid, varid[v], att_name, 1, &data[r])) ERR; if (nc_enddef(ncid)) ERR; } if (nc_close(ncid)) ERR; /* Reopen the file and check it. */ if (file_open(testfile, NC_NOWRITE, &ncid)) ERR; if (nc_inq_dimlen(ncid, 0, &len_in)) ERR; if (len_in != r + 1) ERR; index[0] = r; for (v = 0; v < NUM_VARS; v++) { if (nc_get_var1_text(ncid, varid[v], index, &data_in)) ERR; if (data_in != data[r]) ERR; } if (nc_close(ncid)) ERR; } /* Next record. */ return 0; } /* Test a small file with one var and one att. */ static int test_one_with_att(const char *testfile) { int ncid, dimid, varid; char data = 'h', data_in; int ndims, nvars, natts, unlimdimid; size_t start[NDIMS], count[NDIMS]; /* Create a file with one ulimited dimensions, and one var. */ if (file_create(testfile, NC_CLOBBER, &ncid)) ERR; if (nc_def_dim(ncid, DIM1_NAME, NC_UNLIMITED, &dimid)) ERR; if (nc_def_var(ncid, VAR_NAME, NC_CHAR, 1, &dimid, &varid)) ERR; if (nc_put_att_text(ncid, NC_GLOBAL, ATT_NAME, 1, &data)) ERR; if (nc_enddef(ncid)) ERR; /* Write one record of var data, a single character. */ count[0] = 1; start[0] = 0; FMTCHECK; if (nc_put_vara_text(ncid, varid, start, count, &data)) ERR; /* We're done! */ if (nc_close(ncid)) ERR; /* Reopen the file and check it. */ if (file_open(testfile, NC_NOWRITE, &ncid)) ERR; if (nc_inq(ncid, &ndims, &nvars, &natts, &unlimdimid)) ERR; if (ndims != 1 && nvars != 1 && natts != 0 && unlimdimid != 0) ERR; if (nc_get_var_text(ncid, varid, &data_in)) ERR; if (data_in != data) ERR; if (nc_get_att_text(ncid, NC_GLOBAL, ATT_NAME, &data_in)) ERR; if (data_in != data) ERR; if (nc_close(ncid)) ERR; return 0; } int main(int argc, char **argv) { int i; char testfile[NC_MAX_NAME + 1]; #ifdef USE_PNETCDF MPI_Init(&argc, &argv); #endif printf("\n*** Testing small files.\n"); /*nc_set_log_level(3);*/ /* Go thru formats and run all tests for each of two (for netCDF-3 * only builds), or 4 (for netCDF-4 builds) different formats. */ for (i = NUM_FORMATS; i >= 1; i--) { switch (i) { case NC_FORMAT_CLASSIC: nc_set_default_format(NC_FORMAT_CLASSIC, NULL); printf("Switching to netCDF classic format.\n"); strcpy(testfile, "tst_small_classic.nc"); break; case NC_FORMAT_64BIT_OFFSET: nc_set_default_format(NC_FORMAT_64BIT_OFFSET, NULL); printf("Switching to 64-bit offset format.\n"); strcpy(testfile, "tst_small_64bit.nc"); break; #ifdef USE_CDF5 case NC_FORMAT_CDF5: nc_set_default_format(NC_FORMAT_CDF5, NULL); printf("Switching to 64-bit data format.\n"); strcpy(testfile, "tst_small_cdf5.nc"); break; #else case NC_FORMAT_CDF5: continue; #endif #ifdef USE_NETCDF4 case NC_FORMAT_NETCDF4_CLASSIC: nc_set_default_format(NC_FORMAT_NETCDF4_CLASSIC, NULL); strcpy(testfile, "tst_small_netcdf4_classic.nc"); printf("Switching to netCDF-4 format (with NC_CLASSIC_MODEL).\n"); break; case NC_FORMAT_NETCDF4: /* actually it's _CLASSIC. */ nc_set_default_format(NC_FORMAT_NETCDF4, NULL); strcpy(testfile, "tst_small_netcdf4.nc"); printf("Switching to netCDF-4 format.\n"); break; #else case NC_FORMAT_NETCDF4_CLASSIC: case NC_FORMAT_NETCDF4: continue; /* loop i */ #endif default: printf("Unexpected format!\n"); return 2; } printf("*** testing simple small file with a global attribute..."); test_small_atts(testfile); SUMMARIZE_ERR; printf("*** testing simple small file with fixed dimensions..."); test_small_fixed(testfile); SUMMARIZE_ERR; printf("*** testing simple small file with an unlimited dimension..."); test_small_unlim(testfile); SUMMARIZE_ERR; printf("*** testing small file with one variable..."); test_small_one(testfile); SUMMARIZE_ERR; printf("*** testing small file with one variable and one att..."); test_one_with_att(testfile); SUMMARIZE_ERR; printf("*** testing small file with one record variable, which grows..."); test_one_growing(testfile); SUMMARIZE_ERR; printf("*** testing small file with one growing record " "variable, with attributes added..."); test_one_growing_with_att(testfile); SUMMARIZE_ERR; printf("*** testing small file with two growing record " "variables, with attributes added..."); test_two_growing_with_att(testfile); SUMMARIZE_ERR; } #ifdef USE_PNETCDF MPI_Finalize(); #endif FINAL_RESULTS; }