Commit Graph

92 Commits

Author SHA1 Message Date
dmh
087ae58ffd cleanup and squash changes vav master 2015-10-09 10:12:11 -06:00
dmh
49597a64af merge-squash 2015-10-09 10:12:11 -06:00
dmh
2bfe9bba32 cleanup and squash changes vav master 2015-08-16 21:44:18 -06:00
dmh
859f105005 merge-squash 2015-08-15 16:26:35 -06:00
dmh
fab66699d1 Moved libsrc5 to libsrcp
because pnetcdf is used for
more than CDF-5 files.
2015-08-14 20:39:56 -06:00
Ward Fisher
90ff3b728a Corrected a few things to work with MSVC. 2015-06-01 15:26:58 -06:00
dmh
3dd807a155 The original mem branch somehow got
hosed, so I rebuilt it as a new mem2 branch.
2015-05-28 15:10:10 -06:00
Russ Rew
67ad8d89a8 Fix and test resolution of NCF-326, Unlimited Dimensions NC_EEDGE error. 2015-03-10 06:13:07 -06:00
dmh
1739c50622 Modified a number of tests
to make use of remotetest.unidata.ucar.edu
optional. Purpose is purely for testing
new dts and thredds servers.
2014-10-04 15:59:16 -06:00
dmh
af566dd300 In preparation for adding dap4 support, I have cleaned up
the libdap2 code to make it dap2 protocol + netcdf classic
only.
2014-03-24 14:02:52 -06:00
dmh
9d5c8ba308 1. Previous ci of conversion fixes in libdispatch
was incomplete; complete the fix.
2. There is an inconsistency in the netcdfh interface
   about whether rank (# dimensions) is an int or
   size_t. I inadvertently assumed the latter and that
   breaks some API calls; so revert back.
2014-03-10 12:09:36 -06:00
dmh
1b941d342d 1. Attempted to reduce the number of conversion errors
when -Wconversion is set. Fixed libdispatch, but
   rest of netcdf remains to be done.
2014-03-09 15:51:45 -06:00
Quincey Koziol
fd981824c1 Correct handling of variablen-length sequences for attributes, plus uncomment a
bunch of tests that stress this area of the library.

Also clean up some compiler warnings in the dispatch code.
2014-02-14 08:07:14 -06:00
Quincey Koziol
b2dfacbcfa Big clean up to type handling in libsrc4, which makes fill-values work
correctly for variables with string datatype, plus a few other minor changes.
2014-02-11 17:12:08 -06:00
dmh
582410a407 [NCF-273]/HZY-708311
Add a new function called nc_inq_format_extended that
returns more detailed format information (vis-a-vis
nc_inq_format) about an open dataset.

Note that the netcdf API will present the file as if it had
the format specified by nc_inq_format.  The true file
format, however, may not even be a netcdf file; it might be
DAP, HDF4, or PNETCDF, for example. This function returns
that true file type.  It also returns the effective mode for
the file.

signature: nc_inq_format_extended(int ncid, int* formatp, int* modep)
where
* ncid is the NetCDF ID from a previous call to nc_open() or
  nc_create().
* formatp is a pointer to a location for returned true format.
* modep is a pointer to a location for returned mode flags.

Refer to the actual list in the file netcdf.h to see the
currently defined set.

Also added test cases (tst_formatx*).
2013-12-22 12:53:20 -07:00
Quincey Koziol
7a4479be6b Minor cleanups to reduce warnings in headers, and switch from MPI_BYTE to MPI_INT
for MPI_Allreduce() call.
2013-09-14 13:19:58 -05:00
Dennis Heimbigner
b85d3568ec Added the necessary code to support
group renaming. The primary API
is 'nc_rename_grp(int grpid, const char* name)'.
No test cases provided yet.
This also required adding a rename_grp entry
to the dispatch tables.
2013-07-19 21:48:37 +00:00
Russ Rew
6cd8fca60d Quincey's fixes for NCF-250, netCDF-4 parallel independent access with
unlimited dimension hanging.  Extending the size of an unlimited
dimension in HDF5 must be a collective operation, so now an error is
returned if trying to extend in independent access mode.

Quincey's bug fixes for parallel build portability, particularly
OpenMPI on MacOS-X.
2013-07-08 21:31:13 +00:00
Dennis Heimbigner
dea3c726c8 merge trunk into this branch 2013-03-15 20:31:07 +00:00
Ward Fisher
57084316de Merging changes from netCDF branch. 2013-02-28 21:50:55 +00:00
Dennis Heimbigner
5ca78309cc The effect of this change is to make the struct NC structure
contain as little file-type specific info as possible.  It
modifies especially libsrc so that all of the netcdf-3 data
that used to be in struct NC is now kept in a separate chunk
of data pointed to by the struct NC. This makes all of
current protocols consistent: netcdf-3, netcdf-4, and dap.
2012-09-06 19:44:03 +00:00
Dennis Heimbigner
499f8d3a1c complete update of utilities: ncbyte, nclist, ncuri, nclog 2012-08-08 23:15:18 +00:00
Dennis Heimbigner
f1713dcfe9 fix missing #endif 2012-08-01 17:26:06 +00:00
Dennis Heimbigner
faa1c81671 fix a cosmetic issue with config.h 2012-08-01 17:18:58 +00:00
Ward Fisher
92db1577a4 Corrected an issue when running 'make check' on windows related to declaration of an external function. 2012-07-31 23:02:51 +00:00
Dennis Heimbigner
1041a4c25b add procedure and program to locate a working dts test server 2012-06-22 21:54:52 +00:00
Dennis Heimbigner
99eef24bc2 - Fix NCF-158 to modify ncgen flag defaults.
- Fix NCF-157 to modify DAP code to support
  partial variable retrieval.
- Fix of NCF-154 to solve problem of ncgen
  improperly processing data lists for variables
  of size greater than 2**18 bytes.
- Fix ncgen processing of char variables that have
  multiple unlimited dimensions.
- Partly fix Jira issue: NCF-145 (vlen issues).
- Benchmark program nc_test4/tst_ar4_*) requires arguments
  and should only be invoked inside a shell
  script; fixed so that they terminate cleanly
  if invoked with no arguments.
- Fix the Doxygen processing so it will work
  with make distcheck.
- Begin switchover to using an alternative to ncio.
- Begin support for in-memory (diskless) files.
2012-03-14 23:26:48 +00:00
Dennis Heimbigner
787d32fffd changed form of some static data to work with cxx4 2012-03-08 22:21:12 +00:00
Russ Rew
e39dc1ed39 Revert libtool version to 7.1.1. Disable libdiskless. 2012-01-12 23:27:30 +00:00
Ed Hartnett
7b47adf3a1 removed executable permissions from all code files 2011-10-04 16:05:11 +00:00
Dennis Heimbigner
1578ddac0c 2011-09-20 20:39:04 +00:00
Dennis Heimbigner
732fbff7ce 2011-09-20 17:30:02 +00:00
Dennis Heimbigner
12d4f46668 2011-09-18 20:57:51 +00:00
Dennis Heimbigner
d7790e7e7e 2011-09-16 18:36:08 +00:00
Ed Hartnett
d58c18c623 added diskless files API, subsetting not working, classic model only 2011-08-16 21:04:33 +00:00
Dennis Heimbigner
4f30d3694c cleanup misc. issues 2011-07-14 22:24:02 +00:00
Ed Hartnett
17d09ddac5 moved string.c to libdispatch 2011-07-12 17:58:42 +00:00
Ed Hartnett
cb72a227b4 doxygen changes in variable documentation 2011-07-12 12:30:16 +00:00
Ed Hartnett
b377906536 beginning of conversion to doxygen 2011-07-11 16:04:49 +00:00
Dennis Heimbigner
fec4cdb230 Fixed the following Jira minor bugs:
NCF-42: _Format attribute sometimes being ignored
NCF-43: Fixed unsigned long long parsing.
NCF-47: Make opendap code properly handle illegal names like "x.y" by
        supressing them
NCF-49: check for uint type
NCF-50: properly handle username:pwd embedded in urls.
2011-05-12 17:51:32 +00:00
Dennis Heimbigner
0b477e29cc rebuilt dap constraints 2011-04-16 20:56:36 +00:00
Ed Hartnett
965a3aac70 minor refactor of the build system to work better for cross-compiling 2011-03-15 10:19:08 +00:00