Russ Rew
22b411a17c
Merged in pnetcdf fixes from Greg Sjardema, to make set_fill_mode work
...
with parallel-netcdf, to fully implement parallel-netcdf support for
other functions, and to prevent a hang in hdf5 from an eary return in
an nc4_put_vara() call. Also fixed an nccopy bug when
nc_inq_var_deflate() returns defalate_level of 0, but says the variable
is deflated.
2013-01-15 03:46:46 +00:00
Dennis Heimbigner
635a03f2f7
It turns out that when I converted the code
...
to keep the NC structure pure and independent
of any file format, I neglected to check with
--enable-hdf4. These changes appear to fix that
problem.
2012-12-13 18:22:11 +00:00
Dennis Heimbigner
5f2eb8afbf
Fix a number of potential problems by changing calls to nc_XXX to NC3/4_XXX
2012-12-12 20:05:06 +00:00
Dennis Heimbigner
5ca78309cc
The effect of this change is to make the struct NC structure
...
contain as little file-type specific info as possible. It
modifies especially libsrc so that all of the netcdf-3 data
that used to be in struct NC is now kept in a separate chunk
of data pointed to by the struct NC. This makes all of
current protocols consistent: netcdf-3, netcdf-4, and dap.
2012-09-06 19:44:03 +00:00
Russ Rew
8d53da4826
Fixed bug "adding a bad _FillValue" bug (NCF-190). Fixed minor bugs
...
reported by static analysis, including memory leak in ncdump, missing
size_t cast for chunk cache. Fixed various doc problems, including
byte vs. char issues, missing NC_UBYTE in type list, needed link to
"Building with Windows" page.
2012-08-16 18:31:48 +00:00
Russ Rew
c6f399c731
Fix non-portable test that depends on nonstandardized floating-point format using e+08, not e+008. Fixes for some problems reported in scan-build static analysis.
2012-04-23 23:59:24 +00:00
Dennis Heimbigner
aebd11348a
1)Integrate the oc with improved performance
2012-01-29 18:56:29 +00:00
Russ Rew
e7b2f2b4c6
Revert last change after discovering problem
2012-01-17 22:49:01 +00:00
Russ Rew
67304dc7e2
Fix Jira issue NCF-138, bad default chunksize for variables with only unlimited dimensions
2012-01-17 21:58:09 +00:00
Ed Hartnett
8945e92708
fixed some missing config.h problems
2011-09-26 10:14:55 +00:00
Russ Rew
b3b7861756
Fix ncdump/tst_compress bug that shows up on Solaris systems. Fix default variable chunksize algorithm.
2011-06-23 17:15:01 +00:00
Ed Hartnett
965a3aac70
minor refactor of the build system to work better for cross-compiling
2011-03-15 10:19:08 +00:00
Ed Hartnett
ca6b34a92c
changes to only run tst_many_atts when benchmarks are turned on, and to fix minor bug: handling of a scalar dimension and scalar var of same name
2011-02-23 17:33:11 +00:00
Ed Hartnett
2f9339e3af
fixed integer overflow for ginormous data sizes on 32-bit build
2011-02-15 15:47:10 +00:00
Ed Hartnett
8d91b49ad2
added overhang (not hangover) calculations to default chunksizes
2011-02-14 19:15:36 +00:00
Ed Hartnett
3340b641fd
fixed bug that allowed for zero chunksize when one small, and two giant dimension sizes are used
2011-02-14 16:49:05 +00:00
Ed Hartnett
6b0feecb05
some improvements to chunking algorithm
2011-02-09 12:23:09 +00:00
Ed Hartnett
d6a3fb724c
fix bug in checking magnitudes of dims when determining default chunk sizes, in the case of unlimited dimensions.
2011-02-08 19:35:33 +00:00
Ed Hartnett
5da7f43a3f
more changes for extreme dimension sizes and default chunking
2011-02-04 20:00:22 +00:00
Ed Hartnett
b47678006e
changed default chunksize calculations so they will not have integer overflows, even on 32-bit machines with huge datasets
2011-02-04 17:17:08 +00:00
Ed Hartnett
c03aabe083
fixed default chunking for some really big dimensions
2011-02-03 16:50:51 +00:00
Ed Hartnett
668ed2e0a5
fixed chunking bug: default chunks must always be under 4GB in size
2011-02-02 14:09:15 +00:00
Ed Hartnett
bb07a21f1f
added chunksize test code from Russ to help develop better default chunks
2011-01-31 22:15:37 +00:00
Ed Hartnett
1d86c471a6
fixed def_var_chunking bug when chunksizes are not provided, but chunking is turned on
2011-01-31 21:30:39 +00:00
Ed Hartnett
2ebb1cbafc
fixed problems with parallel I/O of classic files with pnetcdf library
2011-01-28 12:45:52 +00:00
Ed Hartnett
03f63a5f1c
many changes for memory fixes
2010-11-29 22:23:16 +00:00
Ed Hartnett
d53c6bdcfc
fixed bug with nf90_inquire_variable returning range error because of chunksizes for a contiguous variable
2010-09-22 14:25:42 +00:00
Russ Rew
4ce85da310
nccopy changes to support compression
2010-08-29 15:08:12 +00:00
Dennis Heimbigner
c5cb1104b7
removed USE_DISPATCH and most uses of nc3 from libsrc4
2010-07-30 19:20:22 +00:00
Ed Hartnett
45a6f02d7c
some changes to get build working on bluefire
2010-07-09 20:57:09 +00:00
Ed Hartnett
bc6c5a071b
took out more per-variable memory for netCDF-4 files
2010-07-01 12:52:44 +00:00
Ed Hartnett
0e855e0dc5
more changes to make netcdf-4 use less memory per variable
2010-07-01 11:39:34 +00:00
Ed Hartnett
2ca9240913
removed more memory hogging arrays from NC_VAR_INFO_T to improve netcdf-4 memory performance
2010-06-30 21:16:50 +00:00
Ed Hartnett
6db57b7f09
made var->chunksizes array allocated intead of fixed size, to improve memory performance of netCDF-4
2010-06-30 21:05:11 +00:00
Ed Hartnett
f0a72cbefb
fixed broken classic-only build
2010-06-28 17:17:43 +00:00
Ed Hartnett
a2593be245
some changes
2010-06-22 17:12:29 +00:00
Ed Hartnett
e5512f4e56
removed v2 test in nc_test4 when --enable-c-only is used
2010-06-22 10:18:15 +00:00
Ed Hartnett
18f4bca367
moving to trunk subdir
2010-06-03 13:24:43 +00:00
