mirror/netcdf-c
2
0
Fork 0
mirror of https://github.com/Unidata/netcdf-c.git synced 2025-02-05 16:20:10 +08:00
Code Issues Packages Projects Releases Wiki Activity
4,821 Commits 92 Branches 75 Tags 90 MiB
e671e78300
Commit Graph

4821 Commits

This Branch
This Branch
All Branches
Author SHA1 Message Date
Dennis Heimbigner
e671e78300 Forgot to add run_filter to EXTRA_DIST 2018-03-16 12:14:51 -06:00
Dennis Heimbigner
25f062528b This completes (for now) the refactoring of libsrc4. 
The file docs/indexing.dox tries to provide design
information for the refactoring.

The primary change is to replace all walking of linked
lists with the use of the NCindex data structure.
Ncindex is a combination of a hash table (for name-based
lookup) and a vector (for walking the elements in the index).
Additionally, global vectors are added to NC_HDF5_FILE_INFO_T
to support direct mapping of an e.g. dimid to the NC_DIM_INFO_T
object. These global vectors exist for dimensions, types, and groups
because they have globally unique id numbers.

WARNING:
1. since libsrc4 and libsrchdf4 share code, there are also
   changes in libsrchdf4.
2. Any outstanding pull requests that change libsrc4 or libhdf4
   are likely to cause conflicts with this code.
3. The original reason for doing this was for performance improvements,
   but as noted elsewhere, this may not be significant because
   the meta-data read performance apparently is being dominated
   by the hdf5 library because we do bulk meta-data reading rather
   than lazy reading.
 2018-03-16 11:46:18 -06:00
Ward Fisher
74d9767ec0
Merge pull request #901 from Unidata/v4.6.1-release-branch.wif 
V4.6.1 release branch.wif
 2018-03-15 14:30:26 -06:00
Ward Fisher
6074ef0751 Merge branch 'dmh_merge_aggregate.wif' into v4.6.1-release-branch.wif 2018-03-15 11:42:44 -06:00
Ward Fisher
ede8f1b02e Bumping to post-4.6.1-release, for merge back into master. 2018-03-15 11:29:32 -06:00
Ward Fisher
a699d37816 Updated release notes. 2018-03-15 11:03:38 -06:00
Ward Fisher
44852d8d9d Merge remote-tracking branch 'origin/triplehost.dmh' into dmh_merge_aggregate.wif 2018-03-15 11:00:38 -06:00
Ward Fisher
620be6aee7 Merge remote-tracking branch 'origin/ncpyfilter.dmh' into dmh_merge_aggregate.wif 2018-03-15 11:00:19 -06:00
Ward Fisher
0b008fae62 Fencepost for unistd.h 2018-03-12 11:08:50 -06:00
Ward Fisher
6883bb279b
Merge branch 'master' into triplehost.dmh 2018-03-08 15:48:45 -07:00
Ward Fisher
1e0cf1136c
Merge branch 'master' into ncpyfilter.dmh 2018-03-08 15:48:40 -07:00
Ward Fisher
c86f5f01be Corrected typo. 2018-03-08 16:17:27 -05:00
Ward Fisher
f0df5fad56 Substituting wget for curl to see if that fixes the strange error we are seeing on travis. 2018-03-08 15:27:42 -05:00
Ward Fisher
f6a036619a
Merge pull request #895 from NetCDF-World-Domination-Council/ejh_hdf4_more 
Move HDF4 tests to their own directory
 2018-03-07 21:25:45 -07:00
Ward Fisher
9f801085f6
Merge branch 'master' into ncpyfilter.dmh 2018-03-07 13:04:39 -07:00
Dennis Heimbigner
6e5490b6d2
Merge branch 'master' into triplehost.dmh 2018-03-06 13:00:43 -07:00
Ward Fisher
e2e09a358b
Merge branch 'master' into ejh_hdf4_more 2018-03-05 13:02:20 -07:00
Ward Fisher
5e705e85b8
Merge pull request #632 from wkliao/big_var_on_32bit 
large files on 32-bit machines
 2018-03-05 10:26:14 -07:00
Ward Fisher
66fb19ab36
Merge branch 'master' into big_var_on_32bit 2018-03-05 09:35:23 -07:00
Ed Hartnett
016049e509 fixed makefile for hdf4_test 2018-03-05 05:53:41 -07:00
Ed Hartnett
a5713f7ac0 fixed cmake build for hdf4_tests 2018-03-05 05:38:00 -07:00
Ed Hartnett
4e646e03f6 fixed cmake build file 2018-03-05 05:03:46 -07:00
Ed Hartnett
a9457a6169 fixed cmake build file 2018-03-05 04:52:53 -07:00
Ed Hartnett
3e6661e1b1 fixed name 2018-03-05 04:22:15 -07:00
Ed Hartnett
a8af8d4cdf merged PR 888 2018-03-05 03:57:30 -07:00
Ed Hartnett
17f7a76356 moved HDF4 tests 2018-03-05 03:45:18 -07:00
Dennis Heimbigner
7b324657d4
Merge branch 'master' into ncpyfilter.dmh 2018-03-02 19:49:43 -07:00
Ward Fisher
04be884eb6
Merge pull request #893 from Unidata/pr-aggregation2.wif 
Second Try: Aggregation of Pull Requests
 2018-03-02 19:26:01 -07:00
Dennis Heimbigner
dd4e71c150 1. Solve issue raised on netcdfgroup mailing list: 
https://www.unidata.ucar.edu/mailing_lists/archives/netcdfgroup/2018/msg00020.html
See docs/filters.md for a detailed description of the solution.
Basically we add nccopy flags "-F none" and "-F <varname>:none"
to suppress output compression as desired.

2. Add tests to nc_test4/tst_filter.sh to test out the solution.
 2018-03-02 16:55:58 -07:00
Ward Fisher
faad52041f Merge branch 'ejh_valgrind_removal_unidata_again' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into pr-aggregation2.wif 2018-03-02 14:22:42 -07:00
Ward Fisher
63736532e2 Merge branch 'have-alloc-h-check' of https://github.com/mathstuf/netcdf-c into pr-aggregation2.wif 2018-03-02 14:22:27 -07:00
Ward Fisher
cec9bcd29c Merge branch 'classic_ext_ncid' of https://github.com/wkliao/netcdf-c into pr-aggregation2.wif 2018-03-02 14:22:16 -07:00
Ward Fisher
8280586c16 Merge branch 'tst_names' of https://github.com/wkliao/netcdf-c into pr-aggregation2.wif 2018-03-02 14:22:02 -07:00
Ward Fisher
d8f4f3ed6c
Merge pull request #889 from Unidata/gh843.wif 
Revert change that broke extant NCO workflow
 2018-02-28 15:34:30 -07:00
Ward Fisher
ffa36e69c9 Updated release notes. 2018-02-28 14:32:45 -07:00
Ward Fisher
61e9c1c9b1 Corrected typo in test. 2018-02-28 13:40:50 -07:00
Ward Fisher
03bffa1e11 Accomodate non-standard characters in build path in test_common.in 2018-02-28 12:54:53 -07:00
Ward Fisher
c4551856d4 Simplified fix. 2018-02-28 12:20:53 -07:00
Ward Fisher
3ccce81190 Accomodating special characters in path name. 2018-02-28 12:18:20 -07:00
Ward Fisher
faf1470887 Commented out the code, rather than just adding a comment block. 2018-02-27 15:20:58 -07:00
Ward Fisher
6ce110e362 Updated libsrc/attr.m4 in support of https://github.com/Unidata/netcdf-c/issues/843 2018-02-27 15:15:43 -07:00
Dennis Heimbigner
d0a10dbbac re: gh issue https://github.com/Unidata/netcdf-c/issues/887 
Make sure that all attempts to access the rc file
triples check first for triple->host being null.
 2018-02-27 14:22:04 -07:00
Ward Fisher
3dcb627ea1
Merge pull request #883 from Unidata/gh881-ac-par.wif 
Gh881 ac par.wif
 2018-02-27 12:13:19 -07:00
Ed Hartnett
49ebcc0e57 fixed problem of test file 2018-02-27 11:10:04 -07:00
Ed Hartnett
64e5742d88 added tst_bug324 to cmake build 2018-02-27 08:53:58 -07:00
Ed Hartnett
45329862a8 removed valgrind stuff 2018-02-27 08:36:12 -07:00
Ward Fisher
cebe81a742 Corrected logic error in cmake. 2018-02-26 17:16:15 -07:00
Ward Fisher
18c47417f7 Updated ac, cmake based builds to require parallel functionality when parallel tests are requested. 2018-02-26 17:08:26 -07:00
Ward Fisher
43b9c6302c Fix in support of https://github.com/Unidata/netcdf-c/issues/881 2018-02-26 12:56:10 -07:00
Ed Hartnett
a45b8c7b70 merged upstream master 2018-02-23 08:33:07 -07:00