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206 Commits

Author SHA1 Message Date
Ward Fisher
dffaff8406 Further progress on [NCF-340], capturing previously-lost error code NC_EGLOBAL 2015-09-10 15:55:06 -06:00
Ward Fisher
7aa22d275b Turned search back on in developer documentation. Applied part of fix for [NCF-340] in putget.m4 2015-09-10 15:35:14 -06:00
dmh
b8f0522c91 add experimental stdio based ncio module 2015-08-19 17:14:13 -06:00
dmh
fab66699d1 Moved libsrc5 to libsrcp 
because pnetcdf is used for
more than CDF-5 files.
 2015-08-14 20:39:56 -06:00
Russ Rew
6a6cbf4005 More clang warnings eliminated. 2015-08-02 17:19:35 -06:00
Russ Rew
ec89eb5806 Fix ncdump clang warnings. Fix invalid encodings for some non-ascii strings in tests. 2015-08-02 16:09:47 -06:00
Ward Fisher
1f5e6379e4 Fixed a memory corruption. Coverity issue: 1265729: Out-of-bounds access. 2015-07-29 14:58:34 -06:00
Ward Fisher
95cbe52b37 Additional changes to hopefully get autotools and tst_swap4b working together in service of addressing [NCF-338] 2015-07-28 13:43:15 -06:00
Ward Fisher
8f2bf0089e Some tweaks, trying to debug autotools-based build. 2015-07-28 12:38:52 -06:00
Ward Fisher
ac18154e98 Added test for function swap4b. 2015-07-27 15:31:23 -06:00
Ward Fisher
1ea348ce3d Applied patch suggested for in-place big-little-endian conversion. [NCF-338] 2015-07-27 11:09:01 -06:00
Ward Fisher
8bda7fdf67 Fleshed out comments a little more, added a specific check for older systems which return -1 instead of bytes read when the read() call is interrupted and errno is EINTR. 2015-07-21 14:08:44 -06:00
Ward Fisher
7164a99cbc Added some comments. 2015-07-21 14:00:37 -06:00
Ward Fisher
382b24c2c9 Addressing a signal-interrupted read which sets errno to EINTR [NCF-337] 2015-07-21 13:55:59 -06:00
Ward Fisher
39c9d10ede Removed a stray debugging message. 2015-06-18 14:37:31 -06:00
Ward Fisher
952b73e51e Modified how m4 is detected/handled, made it less a straight platform check. 2015-06-11 14:28:39 -06:00
Ward Fisher
bb42e4639e Addressed conflict between master, mem2. 2015-06-02 15:03:12 -06:00
Dennis Heimbigner
0d082d79ea synch oc 2015-05-29 17:31:42 -06:00
dmh
dbc7215063 1. fix nc_open_mem doxygen description 
2. fix some bugs wrt to cygwin vs linux.
3. add to RELEASE_NOTES
4. try to fix tst_inmemory fd error by putting the first
   arg to dotest in quotes.
 2015-05-28 19:23:33 -06:00
Ward Fisher
64e0d2a44e Added a new test for h4 endianness. [NCF332] 2015-05-28 17:13:15 -06:00
dmh
3dd807a155 The original mem branch somehow got 
hosed, so I rebuilt it as a new mem2 branch.
 2015-05-28 15:10:10 -06:00
Ward Fisher
6ed4770e0a Added a typedef int pid_t for Windows platforms, solves a unix compatibility issue. 2015-05-28 10:14:45 -06:00
dmh
c2f880f0f3 conflicts 2015-05-16 15:53:48 -06:00
dmh
ab5022256d need to set -e many of the .sh programs 2015-05-16 15:46:39 -06:00
Ward Fisher
fa1d61b980 Additional debugging for [NCF-331] 2015-05-12 13:52:52 -06:00
Ward Fisher
0d8be16398 Removed some debugging stanzas. 2015-05-08 14:02:11 -06:00
Ward Fisher
b7289cdfa4 Further debugging for [NCF-330]. Making decent progress using the debug flags Microsoft provides. See JIRA issue for links to documentation describing these flags. 2015-05-08 14:02:11 -06:00
Ward Fisher
211806b89f Merge branch 'master' of https://github.com/posophe/netcdf-c into posophe-master 2015-04-22 14:37:28 -06:00
Ward Fisher
c366bec8b3 Activated a couple new tests on MSVC builds when bash is available. 2015-04-20 16:06:20 -06:00
posophe
327731852e correct casting 2015-04-18 13:09:46 +02:00
Ward Fisher
6009ccef7e Trimmed some unnecessary files. 2015-04-13 01:42:49 -06:00
Ward Fisher
9043ae3644 Corrected several static-analysis reported issues. 2015-03-11 14:48:43 -06:00
Ward Fisher
017f196628 Added the [NCF-326] test to CMake build system. 2015-03-10 09:53:13 -06:00
dmh
06a11e51df 1. Allow for the user specified rc file via the env variable 
NCRCFILE.  Note that the value of this environment
   variable should be the absolute path of the rc file, not
   the path to its containing directory.
 2015-03-03 20:17:27 -07:00
Ward Fisher
9c87a7466b Corrected a sloppy error on my part. 2015-02-23 15:58:30 -07:00
Ward Fisher
a8494773f8 Addressed an 'unallocated memory' warning generated by clang. 2015-02-23 13:38:18 -07:00
dmh
f423f27693 Sync with oc project. 
This supports better authorization
handling for DAP requests, especially redirection
based authorization. I also added a new test case
ncdap_tests/testauth.sh.

Specifically, suppose I have a netrc file /tmp/netrc
containing this.
    machine uat.urs.earthdata.nasa.gov login xxxxxx password yyyyyy
Also suppose I have a .ocrc file containing these lines
    HTTP.COOKIEJAR=/tmp/cookies
    HTTP.NETRC=/tmp/netrc
Assume that .ocrc is in the local directory or HOME.

Then this command should work (assuming a valid login and password).
    ncdump -h "https://54.86.135.31/opendap/data/nc/fnoc1.nc"
 2014-12-24 10:22:47 -07:00
Ward Fisher
f9fa4793c2 Revert "Corrected several static analysis issues related to potential null pointer dereferences and memory leaks." 
This caused problems with large file support.  Reverting, will examine more closely and attempt a different fix.

This reverts commit 074603293f.
 2014-12-09 11:49:32 -07:00
Rob Latham
af4eb0fb1d sync lines for generated C files 
m4 can emit 'sync lines' which tell the toolchain "hey, this code
actually came from this other file over here".  Should help prevent
anyone accidentally editing a generated file.
 2014-12-05 12:55:49 -06:00
Rob Latham
3b61804ff7 fix m4 dealing with split lines 
Wei-keng Liao fixed this for pnetcdf. See pnetcdf revision 1904.
 2014-12-05 12:55:38 -06:00
Ward Fisher
074603293f Corrected several static analysis issues related to potential null pointer dereferences and memory leaks. 2014-11-11 15:05:55 -07:00
Ward Fisher
9f9de5a493 Added a fix for a 'garbage/undefined value' bug reported by clang. in var.c, when varp->shape was being allocated, it was not being initialized properly and as a result, in some circustances, could potentially be dereferenced and evaluated without having a proper value. It is now initialized to 0. Hopefully this does not cause a problem. All the tests continue to pass, but I'm leaving a verbose comment here in case there is a knock-on problem discovered somewhere down the line. 2014-11-06 14:43:09 -07:00
Ward Fisher
52189b7725 Corrected an an issue where memcpy might be passed a NULL destination buffer. 2014-10-01 16:31:57 -06:00
Ward Fisher
461c96cdbe Fixed a clang-reported NULL pointer dereference issue. 2014-09-30 11:30:00 -06:00
Ward Fisher
9b1eb01923 Modified comment to adhere to doxygen format. 2014-09-18 13:31:30 -06:00
Ward Fisher
056de3f69d Corrected a logic error introduced in previous commit. 2014-08-27 15:40:41 -06:00
Ward Fisher
dac65bdab8 Removed a commented-out block of code. 2014-08-27 14:40:40 -06:00
Ward Fisher
4286822b91 Moved lseek call out of assert statement into an explicit check. JIRA NCF-312. 2014-08-27 14:26:54 -06:00
Ward Fisher
ae927f3c84 Fixed a dereference issue where ndims was greater than 0 but the allocation for dimids would fail. Identified by clang static analysis. 2014-07-09 12:45:06 -06:00
Ward Fisher
7f812b367e Manual merge of pull request https://github.com/Unidata/netcdf-c/pull/64 contributed by nschloe. Assorted CMake improvements. 2014-06-11 15:51:31 -06:00