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Author SHA1 Message Date
Dennis Heimbigner
ddd9819c7b Merge branch 'master' into authfix.tmp 2021-04-14 15:42:11 -06:00
Dennis Heimbigner
f720c5edbe try18 2021-04-14 15:14:14 -06:00
Ward Fisher
67c640f1b8
Merge pull request #1984 from DennisHeimbigner/kwaliasfix.dmh 
Fix the handling of certain alias types in CDL files.
 2021-04-14 14:20:56 -06:00
Dennis Heimbigner
30ee9914e2 Update release notes 2021-04-14 11:23:33 -06:00
Dennis Heimbigner
ac421620b3 Fix the handling of certain alias types on CDL files. 
re: https://github.com/Unidata/netcdf-c/issues/1977

PR https://github.com/Unidata/netcdf-c/pull/1753, changed ncgen
to allows certain type names to be used as identifiers in
selected situations.

An unwanted side effect was that existing type aliases no longer
were accepted by ncgen. Specifically, using the "long" type
caused an error.

I was able to figure out a better solution to the original
problem (https://github.com/Unidata/netcdf-c/issues/1750)
that also fixes this problem as well.

This PR fixes that problem in ncgen/ncgen.l,
and adds tests to ncdump/test_keywords.sh
 2021-04-13 16:56:43 -06:00
Ward Fisher
1e99bb4a7c
Merge pull request #1979 from opoplawski/builddir 
Fix out of tree builds with configure
 2021-04-12 16:07:54 -06:00
Ward Fisher
bcadaf3839
Merge pull request #1980 from opoplawski/test 
Fix tst_h_atts3 for hdf5 1.12
 2021-04-12 16:07:24 -06:00
Orion Poplawski
9fc8ae62a8 Fix tst_h_atts3 for hdf5 1.12 2021-04-10 19:51:58 -06:00
Orion Poplawski
031b93a0f8 Fix out of tree builds with configure - add $(top_builddir)/include to include directory search 2021-04-10 17:57:55 -06:00
Dennis Heimbigner
665fb1c066 Merge branch 'master' into authfix.tmp 2021-04-09 15:49:21 -06:00
Dennis Heimbigner
304b5f7e72 actions 2021-04-09 15:45:51 -06:00
Dennis Heimbigner
52b71b3d30 ckp 2021-04-09 15:45:06 -06:00
Ward Fisher
e38078d14f
Merge pull request #1952 from DennisHeimbigner/nczarr_xarray.dmh 
Add support for the XArray Zarr _ARRAY_DIMENSIONS attribute
 2021-04-08 13:01:29 -06:00
Dennis Heimbigner
2e1438c444 ckp 2021-04-06 21:43:42 -06:00
Dennis Heimbigner
c1a9917f80 Merge branch 'master' into authfix.tmp 2021-04-06 13:31:07 -06:00
Dennis Heimbigner
02bca8fae7 force tests to rerun 2021-04-02 19:05:58 -06:00
Dennis Heimbigner
0454d8e235 Addendum: This PR has been extended to include 
interoperability fixed. We were given a Zarr format dataset
stored as a directory+file tree. This dataset uses the XArray
conventions and was generated by some non-Unidata Zarr implementation.
In attempting to process it with NCZarr, several interoperability
problems were discovered and fixed. This gives us more confidence
that NCZarr -- using pure zarr -- can interoperate with other
Zarr implementations.

Specific changes:
* Add test nczarr_test/run_interop.sh
* Support attributes with single value not enclosed in JSON array tags.
* Add mode inferencing and use it in nczarr_test/run_purezarr.sh
* Reduce size of tst_err_enddef.nc because it is more than 3 GB.
 2021-04-02 18:39:50 -06:00
Dennis Heimbigner
727dd6861e Merge branch 'master' into nczarr_xarray.dmh 2021-04-02 18:29:39 -06:00
Ward Fisher
9bf69804a1
Merge pull request #1976 from Unidata/gh1969.wif 
PR1970 + Release Notes
 2021-04-02 11:22:34 -06:00
Ward Fisher
37f69e1f74 Updated release notes. 2021-04-02 10:54:24 -06:00
Ward Fisher
acc8e769ee Merge branch 'bzip2108.dmh' of https://github.com/DennisHeimbigner/netcdf-c into gh1969.wif 2021-04-02 10:53:31 -06:00
Dennis Heimbigner
e038553abe Update RELEASE_NOTES.md 2021-04-01 14:12:49 -06:00
Dennis Heimbigner
e7c4e7ead1 add zjson fix 2021-04-01 13:56:04 -06:00
Ward Fisher
f01e4f1027
Merge pull request #1975 from Unidata/gh1962.wif 
Refactored the HDF5 version detection logic in CMakeLists.txt
 2021-04-01 13:04:41 -06:00
Ward Fisher
ad51b0a79a Updated release notes, made if-block syntax more verbose. 2021-04-01 11:46:44 -06:00
Ward Fisher
35bf5f4b79 Corrected a typo. 2021-04-01 11:43:15 -06:00
Ward Fisher
17b4c2bebb Refactored the HDF5 version detection logic in CMakeLists.txt in support of https://github.com/Unidata/netcdf-c/issues/1962 2021-04-01 11:24:11 -06:00
Ward Fisher
5b40de1267
Merge pull request #1974 from gsjaardema/patch-49 
Fix use of ininitialized CMake variable
 2021-04-01 09:43:00 -06:00
Greg Sjaardema
6118776d60
Fix use of ininitialized CMake variable 
The `ISCMAKE` was defined after its first use in a `configure_file` call.  Moved to before its first use.
 2021-04-01 08:13:13 -06:00
Dennis Heimbigner
9a4badaf16 ckp 2021-03-31 21:56:36 -06:00
Ward Fisher
790a1a2a06
Merge pull request #1961 from Unidata/4.8.0-wellspring.wif 
Selectively merge relevant changes and updates back upstream from the 4.8.0 prep branch.
 2021-03-30 16:40:55 -06:00
Dennis Heimbigner
395f47a9b3 Update the bzip library in plugins to version 1.0.8 
re: Issue https://github.com/Unidata/netcdf-c/issues/1969
 2021-03-30 15:27:24 -06:00
Ward Fisher
670fd2482f Corrected typo preventing success when running make dist or make distcheck 2021-03-30 14:08:00 -06:00
Ward Fisher
cf5fc9b0f7 Updated doxyfile to include libnczarr/zarr.c, also removed references to files that have been removed. 2021-03-30 13:53:16 -06:00
Ward Fisher
90c662c58f Corrected release date in preparation for today's release. 2021-03-30 10:08:05 -06:00
Ward Fisher
95719addd2 Added 1.0.1 to test matrix in support of https://github.com/Unidata/netcdf-c/pull/1931#issuecomment-804312933 2021-03-26 14:50:22 -06:00
Ward Fisher
85f3abb515 Updated expected release date. 2021-03-26 14:47:53 -06:00
Ward Fisher
ac4ade4f18 Merge branch '4.8.0-wellspring-prs.wif' into 4.8.0-wellspring.wif 2021-03-22 16:59:15 -06:00
Ward Fisher
4a7f5aeef2 Added check for H5Literate symbol (hdf5 1.8.x, 1.10.x) or macro (1.12.x)) in support of https://github.com/Unidata/netcdf-c/issues/1965 2021-03-22 13:40:11 -06:00
Ward Fisher
094e2a4ea3 Amend check for H5Literate to work with 1.10.x 2021-03-22 13:24:03 -06:00
Ward Fisher
3e0b36a355 Added check for H5Literate in support of https://github.com/Unidata/netcdf-c/issues/1965 2021-03-22 13:05:23 -06:00
Ward Fisher
fc4bfc6196 Merge branch 'dispatchversion.dmh' of https://github.com/DennisHeimbigner/netcdf-c into 4.8.0-wellspring-prs.wif 2021-03-22 12:41:03 -06:00
Ward Fisher
f75c1c4d7b
Merge branch 'master' into dispatchversion.dmh 2021-03-22 12:40:09 -06:00
Ward Fisher
dab186b688 Merge branch '4.8.0-wellspring.wif' of github.com:Unidata/netcdf-c into 4.8.0-wellspring.wif 2021-03-22 12:38:24 -06:00
Ward Fisher
ffa8a7067f Merge branch '951' of https://github.com/brtnfld/netcdf-c into 4.8.0-wellspring-prs.wif 2021-03-22 11:51:54 -06:00
Ward Fisher
379681ff55 Merge branch 'patch-47' of https://github.com/gsjaardema/netcdf-c into 4.8.0-wellspring.wif 2021-03-22 11:48:10 -06:00
Ward Fisher
98abfb7749 Bumped version numbers to next development version. 2021-03-19 11:49:09 -06:00
Ward Fisher
7535a9c98f Updated SO version in cmakelists.txt in preparation for the 4.8.0 release. 2021-03-19 11:30:38 -06:00
Ward Fisher
c12d80a59b Updated SO version in preparation for public release. 2021-03-19 10:36:13 -06:00
Ward Fisher
2499a540a5 Merge branch 'patch-47' of https://github.com/gsjaardema/netcdf-c into 4.8.0-wellspring.wif 2021-03-18 14:51:18 -06:00