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308 Commits

Author SHA1 Message Date
Dennis Heimbigner
11a259ad86 Add provenance info for netcdf-4 files. 
This consists of a persistent attribute named
_NCProperties plus two computed attributes
_IsNetcdf4 and _SuperblockVersion.
See the 'Provenance Attributes' section
of docs/attribute_conventions.md for details.
 2016-05-07 14:32:07 -06:00
Ward Fisher
b248523a49 Corrected a potential null pointer dereference. 2016-04-12 11:18:34 -06:00
Ward Fisher
5a7d5c6eca Merge branch 'substrate' 2016-04-08 11:16:37 -06:00
dmh
ed317d4cad ckp 2016-04-06 20:38:51 -06:00
dmh
39fa6a071c ckp 2016-04-06 20:20:57 -06:00
dmh
764a1c40a3 ckp 2016-04-06 19:51:40 -06:00
Dennis Heimbigner
a8ff523677 ckp 2016-04-06 14:05:58 -06:00
Ward Fisher
6409b11640 Modified nc_inq_type so that it will return valid information for valid data types even if the associated ncid doesn't have access to those data types. See https://github.com/Unidata/netcdf-c/issues/240 for more information. 2016-04-05 20:13:42 +00:00
Ward Fisher
b19b807e8b Working around a couple of problematic calls to fstat in support of https://github.com/Unidata/netcdf-c/issues/188 . No idea why these were a problem in VS14 (Visual Studio 2015) and not in VS12 (Visual Studio 2013). It's possible there are other, similar issues out there. We'll see what turns up when we run all the tests. These changes were tested against nc_test4/tst_large2.c 2016-03-02 13:03:29 -07:00
Ward Fisher
fbdea5c4a0 Working in support of https://github.com/Unidata/netcdf-c/issues/188 . Exploratory work. 2016-02-29 15:08:09 -07:00
Ward Fisher
374a8f4193 More cleaning up of documentation (there will probably be a lot of this) and tweaking files so that documentation renders as expected. 2016-01-14 16:02:00 -07:00
Ward Fisher
30e1cca0d0 Reorganized file/datastream IO functions in documentation. 2016-01-14 15:50:50 -07:00
Ward Fisher
3f27ec6db4 Tightening the Doxygen documentation. 2016-01-14 15:33:50 -07:00
Ward Fisher
75b0bcf07e Trying to sort out why netcdf parallel documentation isn't being generated. 2016-01-14 11:02:23 -07:00
Ward Fisher
0ffbdee1eb Walking back API changes. 2016-01-04 21:59:51 +00:00
Ward Fisher
c616b53358 Walking back some of the changes to see if they were necessary (hard to tell), which should hopefully fix netcdf-cxx4 compatibility. 2016-01-04 14:49:47 -07:00
Ward Fisher
21be11b031 Resolve merge conflict. 2016-01-04 14:22:26 -07:00
Ward Fisher
bd92caa176 More changes towards fixing the issue where the file is read incorrectly. 2015-12-28 17:36:05 +00:00
Ward Fisher
925da14d2a Some additional errors reared up after fixing the main frustrating one. Working towards fixing them. 2015-12-24 01:37:42 +00:00
Ward Fisher
99092217f3 Addressed github issue https://github.com/Unidata/netcdf-c/issues/171 2015-12-08 15:06:30 -07:00
Greg Sjaardema
2ae0e45cd3 Remove hard-wired use of NC_MAX_DIMS 
Replace static array dimensioned to NC_MAX_DIMS with dynamic memory allocation of correctly sized array.
 2015-11-11 14:01:18 -05:00
Ward Fisher
612b35a84c Merge branch 'master' into cdf-5, in preparation for merging the CDF-5 functionality into the master branch. This will be the key new feature for netcdf 4.4.0. 2015-11-05 13:40:35 -07:00
Ward Fisher
ee9a68e931 Modified behavior when an unknown error is handled by libpnetcdf. 2015-10-28 16:44:54 -06:00
Ward Fisher
1979a1ca5f Corrected an issue on 32-bit Windows. 2015-10-27 12:31:36 -06:00
Ward Fisher
d5ce804744 The issue (at least this one) in nctest is solved. In dv2i.c, line 896 (or thereabouts), a long variable was being passed to a function expecting a ptrdiff_t. These are not compatible sizes, on Windows. 2015-10-27 12:04:03 -06:00
dmh
7480d7d97d - clean up the dfile.c confusion about NC_64_BIT_OFFSET 
- sync oc2 with  master for https://DennisHeimbigner@github.com/Unidata/oc.git
- Cleanup auth.html documentation.
- Cleanup obsolete documentation.
 2015-10-24 21:45:13 -06:00
Ward Fisher
a359cb6a53 Reverted some of the spelling corrections. Some misspellings were intentional 2015-10-16 14:36:17 -06:00
Ward Fisher
99c3112c50 Modified doxygen reference to remove a warning. 2015-10-15 12:23:18 -06:00
tbeu
e2820e4d8a Fix common typos 
Detected by https://github.com/vlajos/misspell_fixer
 2015-08-20 11:42:05 +02:00
dmh
859f105005 merge-squash 2015-08-15 16:26:35 -06:00
dmh
fab66699d1 Moved libsrc5 to libsrcp 
because pnetcdf is used for
more than CDF-5 files.
 2015-08-14 20:39:56 -06:00
Ward Fisher
f97088412a Corrected a potential memory leak reported by static analysis. 2015-07-10 15:10:32 -06:00
Ward Fisher
7bb61718bf Corrected a couple of minor issues reported by static analysis. 2015-07-10 15:09:14 -06:00
dmh
dbc7215063 1. fix nc_open_mem doxygen description 
2. fix some bugs wrt to cygwin vs linux.
3. add to RELEASE_NOTES
4. try to fix tst_inmemory fd error by putting the first
   arg to dotest in quotes.
 2015-05-28 19:23:33 -06:00
dmh
3dd807a155 The original mem branch somehow got 
hosed, so I rebuilt it as a new mem2 branch.
 2015-05-28 15:10:10 -06:00
Ward Fisher
ee006f4938 Updated convention documentation, added param and returns tags to comment header for nc_inq_unlimdims 2015-03-13 14:02:20 -06:00
Ward Fisher
b6d24186d9 Formated auth.md to remove the bevy of format warnings included. Moved it to a sub-section of the NetCDF User's Guide, until a better place for it is found. It seems like we should have a DAP-related page/documentation group. 2015-03-12 11:08:23 -06:00
Russ Rew
67ad8d89a8 Fix and test resolution of NCF-326, Unlimited Dimensions NC_EEDGE error. 2015-03-10 06:13:07 -06:00
dmh
f423f27693 Sync with oc project. 
This supports better authorization
handling for DAP requests, especially redirection
based authorization. I also added a new test case
ncdap_tests/testauth.sh.

Specifically, suppose I have a netrc file /tmp/netrc
containing this.
    machine uat.urs.earthdata.nasa.gov login xxxxxx password yyyyyy
Also suppose I have a .ocrc file containing these lines
    HTTP.COOKIEJAR=/tmp/cookies
    HTTP.NETRC=/tmp/netrc
Assume that .ocrc is in the local directory or HOME.

Then this command should work (assuming a valid login and password).
    ncdump -h "https://54.86.135.31/opendap/data/nc/fnoc1.nc"
 2014-12-24 10:22:47 -07:00
Ward Fisher
790de7121e Removed redundant error group. 2014-12-09 15:57:59 -07:00
Ward Fisher
e4f8489bc3 Reorganized Copyright file, removed some improper references. 2014-12-08 13:13:08 -07:00
dmh
d67d00ca7e re NCF-319 
The pnetcdf support was not
properly being used to provide
mpi parallel io for netcdf-3 classic
files. The wrong dispatch table was being
used.  The fix was to modify
dfile.c#NC_check_file_type to properly
specify the pnetcdf dispatch table when
use_parallel was true.
 2014-10-13 14:33:06 -06:00
dmh
938e8d260e test pnetcdf 2014-10-12 21:29:55 -06:00
dmh
8a71ed7569 Partially deprecated varm function 2014-10-12 12:38:41 -06:00
dmh
7c7db22bc7 Removed some useless code 2014-10-11 12:27:17 -06:00
dmh
6d22cbb203 Name conflict when using mpi see NCF-317 2014-10-07 16:24:17 -06:00
dmh
31d15ec532 re: NCF-317 
If the netCDF-C library is built with the
HDF5 library but without the HDF4 library and one attempts
to open an HDF4 file, an abort occurs rather than returning
a proper error code (NC_ENOTNC).
Fix is to modify dfile.c#NC_check_file_type to properly
#ifdef relevant tests.
 2014-10-07 12:37:41 -06:00
Ward Fisher
b0de596344 Merge branch 'fix-crash-on-malformed-uris' of https://github.com/martin-steghoefer/netcdf-c into martin-steghoefer-fix-crash-on-malformed-uris 2014-10-06 10:49:40 -06:00
Ward Fisher
d4c9482ab6 Coverity: 1243512, Resource Leak. 2014-10-06 10:48:11 -06:00
Martin Steghöfer
a9012c7bfe Fix segmentation fault when parsing malformed URLs (e.g. "http:/"). 2014-10-05 19:28:03 +02:00