Commit Graph

348 Commits

Author SHA1 Message Date
Dennis Heimbigner
b4dc1dca19 More cmake fixes 2016-05-07 14:32:07 -06:00
Dennis Heimbigner
272e6f4022 Oops, forgot to test nc3 only.
Fixed some errors from that case.
2016-05-07 14:32:07 -06:00
Dennis Heimbigner
11a259ad86 Add provenance info for netcdf-4 files.
This consists of a persistent attribute named
_NCProperties plus two computed attributes
_IsNetcdf4 and _SuperblockVersion.
See the 'Provenance Attributes' section
of docs/attribute_conventions.md for details.
2016-05-07 14:32:07 -06:00
Ward Fisher
3cbd45f539 Ensuring run_back_comp_tests.sh only runs if netcdf4 is enabled. 2016-04-28 14:41:42 -06:00
Dennis Heimbigner
5a1ca24fd6 Fix github issue: https://github.com/Unidata/netcdf-c/issues/236
If a char valued attribute contains embedded nul characters,
then illegal xml will be generated when using the -x (ncml) flag.

There is not good solution since we have a char value '\0' that
is legal in a netcdf-c char valued attribute, but is completely
illegal in ncml (i.e. xml).

So, implemented hack is to go ahead and generate '�' entities
and then complain that we are generating illegal ncml.
2016-03-17 22:05:46 -06:00
Dennis Heimbigner
39e9cd0ffe Fix issues with Github pull request 187
(https://github.com/Unidata/netcdf-c/pull/187)
Primary problem was cmake build errors.
2016-01-08 12:55:11 -07:00
Dennis Heimbigner
5e4cbd2fec Forgot to check cmake build 2016-01-05 22:26:20 -07:00
Dennis Heimbigner
d15f277252 The max dimension sizes do not take CDF-5 format into account.
NetCDF-c Github issue #185

The code in libsrc/dim.c has not been upgraded to support
CDF-5 format.

Rule we are implementing sets the max dimension sizes as follows:

Classic:	CDF-1	NC_MAX_INT - 3    = 2147483647 - 3
64 bit Offset:	CDF-2	NC_MAX_UINT - 3	  =  4294967295 - 3
64 bit Data:	CDF-5	NC_MAX_UINT64 - 3 = 18446744073709551615 - 3

The -3 is to handle rounding.
2016-01-05 21:26:25 -07:00
Ward Fisher
ac9f02d01a Modified index passed for last row when printing with annotations, in support of fixing https://github.com/Unidata/netcdf-c/issues/181 2015-12-31 21:20:36 +00:00
Dennis Heimbigner
8e6beda671 NetCDF-c Github issue #178
NetCDF-c Github issue #178 / esupport BNL-694121

The ncgen man pages says:
> Note also that the words variable',dimension', data',group', and
> `types' are legal CDL names, but be careful that there is a space be-
> tween them and any following colon character when used as a variable
> name. This is mostly an issue with attribute declarations.

Ncdump does not obey this rule.
The fix is to modify ncdump/ncdump.c to check if a variable name is
a keyword.

Also added test case.
2015-12-26 18:19:04 -07:00
dmh
47e10591b4 ckp 2015-11-19 13:44:55 -07:00
Ward Fisher
c1210f4020 Merge branch 'master' into cdf5-sync-master 2015-11-09 13:45:11 -07:00
dmh
413e49d758 1. There were several bugs in ncdump/dumplib.c
that were not taking the CDF-5 format into account.

2. Had to update ncgen.1 man page to define the new
   k-flag rules to deal with cdf-5.

3. Had to fix some tests that use 'cmp' for comparison;
   this really should be deprecated.

3. There was a bug in configure.ac with respect
   to using the enable-netcdf-4 flag vs
   using disable-netcdf-4.
2015-11-06 17:03:28 -07:00
Ward Fisher
996ef87cd1 More refactoring to fix an issue where an nc4 test was being run when nc4 was disabled. 2015-11-06 13:20:10 -07:00
Ward Fisher
f551581ceb Modified 'in-memory' test to only run enhanced tests if netcdf-4 is enabled. 2015-11-06 13:12:09 -07:00
Ward Fisher
612b35a84c Merge branch 'master' into cdf-5, in preparation for merging the CDF-5 functionality into the master branch. This will be the key new feature for netcdf 4.4.0. 2015-11-05 13:40:35 -07:00
dmh
7480d7d97d - clean up the dfile.c confusion about NC_64_BIT_OFFSET
- sync oc2 with  master for https://DennisHeimbigner@github.com/Unidata/oc.git
- Cleanup auth.html documentation.
- Cleanup obsolete documentation.
2015-10-24 21:45:13 -06:00
Ward Fisher
c825d612c2 Tweaked some tests so that everything would pass when netcdf4 was disabled. 2015-10-22 14:09:19 -06:00
Ward Fisher
519a56019f Merge branch 'fix-typos' of https://github.com/tbeu/netcdf-c into tbeu-fix-typos 2015-10-16 14:16:09 -06:00
Dennis Heimbigner
cd7a06b193 pull request 2015-10-12 17:09:37 -06:00
Dennis Heimbigner
554034b712 1. Added temporary work-around for cygwin where
AC_CHECK_SIZEOF is not working because anti-virus
   will not allow very rapid creation/deletion of a
   file with same name.
2. modified some test baselines to attempt to fix
   Ward's issue
2015-10-09 10:33:40 -06:00
dmh
8fc86035b2 merge-squash 2015-10-09 10:22:00 -06:00
Dennis Heimbigner
dccbc87d24 1. Added temporary work-around for cygwin where
AC_CHECK_SIZEOF is not working because anti-virus
   will not allow very rapid creation/deletion of a
   file with same name.
2. modified some test baselines to attempt to fix
   Ward's issue
2015-10-09 10:14:45 -06:00
dmh
49597a64af merge-squash 2015-10-09 10:12:11 -06:00
Dennis Heimbigner
a1be2456eb 1. Added temporary work-around for cygwin where
AC_CHECK_SIZEOF is not working because anti-virus
   will not allow very rapid creation/deletion of a
   file with same name.
2. modified some test baselines to attempt to fix
   Ward's issue
2015-09-15 15:18:59 -06:00
dmh
0a7ff043a2 re: Jira NCF-320
Partially resolve by making
string variables and attributes use
UTF-8 encoding.
Normalization is not necessarily fixed,
however.
2015-08-20 15:53:48 -06:00
tbeu
e2820e4d8a Fix common typos
Detected by https://github.com/vlajos/misspell_fixer
2015-08-20 11:42:05 +02:00
Russ Rew
495fea71b9 Fix builddir vs srdir problem for ncdump/ctest.c and ctest64.c 2015-08-18 16:10:18 -06:00
dmh
859f105005 merge-squash 2015-08-15 16:26:35 -06:00
Ward Fisher
26be22c7db Made the sed statement more specific to avoid problems on non-windows systems. 2015-08-11 11:52:48 -06:00
Ward Fisher
f00b1e8f6f Added a touch of post-processing to make a shell script test work on Windows. 2015-08-11 11:48:49 -06:00
Russ Rew
a62c9d3059 Fix conflicts after merge 2015-08-02 17:29:36 -06:00
Russ Rew
2e029a3058 More cleanups from clang warnings. 2015-08-02 17:23:32 -06:00
Russ Rew
0687dfe5a2 Cleanup clang warnings. 2015-08-02 17:22:50 -06:00
Russ Rew
ec89eb5806 Fix ncdump clang warnings. Fix invalid encodings for some non-ascii strings in tests. 2015-08-02 16:09:47 -06:00
Russ Rew
3d5be0b3f0 Fix NCF-339, ncdump -x omits exponent char in XML double attribute value 2015-08-02 08:54:29 -06:00
Ward Fisher
f8e2d21663 Corrected a potential resource leak. Coverity ID: 1302447 2015-07-29 14:49:05 -06:00
Russ Rew
374a7550c4 Better fix for NCF-336 2015-07-14 10:00:40 -06:00
Ward Fisher
90ff3b728a Corrected a few things to work with MSVC. 2015-06-01 15:26:58 -06:00
Ward Fisher
5d15a332f0 Fixed a typo in the tst_inmemory script. From http://www.tldp.org/LDP/abs/html/io-redirection.html, '&>' redirects both stdout and stderr to filename, whereas '>&' is used with file descriptor handles, e.g. '1>&2'. 2015-06-01 13:07:16 -06:00
Ward Fisher
0cb9631b5c Added ncdump test tst_inmemory into CMake config file. 2015-06-01 12:26:40 -06:00
dmh
a763a5d71d add more debug info to ncdump 2015-05-29 16:04:22 -06:00
dmh
dbc7215063 1. fix nc_open_mem doxygen description
2. fix some bugs wrt to cygwin vs linux.
3. add to RELEASE_NOTES
4. try to fix tst_inmemory fd error by putting the first
   arg to dotest in quotes.
2015-05-28 19:23:33 -06:00
dmh
3dd807a155 The original mem branch somehow got
hosed, so I rebuilt it as a new mem2 branch.
2015-05-28 15:10:10 -06:00
Ward Fisher
28908d9cfe Modified some tests to work on Windows when a bash shell is available. 2015-04-22 15:47:19 -06:00
Ward Fisher
c366bec8b3 Activated a couple new tests on MSVC builds when bash is available. 2015-04-20 16:06:20 -06:00
Ward Fisher
fa2818863a Changed how several tests are built/invoked. 2015-04-20 13:54:17 -06:00
Ward Fisher
1fe58bde2d Added tst_netcdf4, tst_h_rdc0 to CMake build system. 2015-04-20 13:18:24 -06:00
Ward Fisher
88a012651a Wired tst_nccopy4.sh into cmake. 2015-04-20 13:15:02 -06:00
Ward Fisher
c4511e2ed2 Wired fillbug into cmake. 2015-04-20 13:08:26 -06:00