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862 Commits

Author SHA1 Message Date
Ed
bded163c38 debugging ncdump build problem 2024-08-14 13:29:52 -06:00
Dennis Heimbigner
f0f0f39950 Cleanup various Zarr-related build issues 
# Description
Remove various obsolete build options. Also do some code movement.

## Specific Changes

* The remotetest server is sometimes unstable, so provide a mechanism
  to force disabling calls to remotetest.unidata.ucar.edu.
  This is enabled by adding a repository variable named
  REMOTETESTDOWN with the value "yes".
* Fix CMakeLists.txt to use the uname command as an alternate
  to using the hostname command (which does not work under cygwin).
* Remove the JNA stuff as obsolete
* Remove the ENABLE_CLIENTSIDE_FILTERS options since it has been
  disabled for a while.
* Fix bad option flag in some github action .yml files: change --disable-xml2 to --disable-libxml2
* Collect globalstate definitions into nc4internal.h
* Remove ENABLE_NCZARR_FILTERS_TESTING option as obsolete and replace
  with ENABLE_NCZARR_FILTERS
* Move some dispatcher independent functions from libsrc4/nc4internal.c to libdispatch/ddispatch.c
* As a long term goal, and because it is now the case that --enable-nczarr
    => USE_NETCDF4, make the external options --enable-netcdf-4 and
    --enable-netcdf4 obsolete in favor of --enable-hdf5
    We will do the following for one more release cycle.
        1. Make --enable-netcdf-4 be an alias for --enable-netcdf4.
        2. Make --enable-netcdf4 an alias for --enable-hdf5.
        3. Internally, convert most uses of USE_NETCDF_4 ad USE_NETCDF4 to USE_HDF5
    After the next release, --enable-netcdf-4 and --enable-netcdf4 will
    be removed.
 2024-05-15 18:46:25 -06:00
Ward Fisher
f8164e3b73
Merge pull request #2917 from MehdiChinoune/ci-mingw 
CI: Setup a CMake job for MSYS2/MinGW
 2024-05-14 17:26:43 -07:00
Ward Fisher
ebd3f36a9a Modify CMakeLists.txt to honor CMAKE_INSTALL_MANDIR in support of https://github.com/Unidata/netcdf-c/issues/2920. 2024-05-07 16:46:43 -06:00
Dennis Heimbigner
211538cf25 Modify ncdump to print char-valued variables as utf8. 
re: Issue https://github.com/Unidata/netcdf-c/issues/2916

Currently, ncdump prints char-valued variables as a mix
of ascii and octal characters. The octal format is used
for non-printable ascii character values.

This PR changes this to print the char variable values
as raw binary. This means in practice that utf-8 tags
are properly interpreted and printed as utf-8.
 2024-05-07 10:36:14 -06:00
مهدي شينون (Mehdi Chinoune)
c5c2d931cc CMake: Fix running tests on MinGW 2024-05-07 04:44:54 +01:00
Ward Fisher
c26f7eabf4 Refactor macro _FillValue to NC_FillValue in support of https://github.com/Unidata/netcdf-c/issues/2858 2024-04-24 11:38:07 -06:00
Ward Fisher
cdfe909a1a Add CI for a Windows Runner on Github Actions. 2024-04-17 13:29:18 -05:00
Ward Fisher
9639ba445d
Merge pull request #2875 from seanm/clang-tidy-fixes 
Misc clang-tidy fixes, and added a .clang-tidy config file
 2024-04-05 14:45:22 -06:00
Ward Fisher
38d3831319
Merge branch 'main' into clang-tidy-fixes 2024-04-02 15:30:47 -06:00
Peter Hill
3c6bd83330
Change format of backwards-loops 
Enables using correct `size_t` type for loop counter, usually fixing
some conversion warnings
 2024-03-25 14:25:38 +00:00
Ward Fisher
ad53ef4203
Merge pull request #2814 from ZedThree/fix-dumplib-warnings 
Fix most warnings in `dumplib.c`
 2024-03-20 17:19:52 -06:00
Kyle Shores
a82659b0e9 Replace ENABLE_TESTS with NETCDF_ENABLE_TESTS 2024-03-18 15:54:48 -05:00
Kyle Shores
d1334f7b88 Replace ENABLE_NCZARR with NETCDF_ENABLE_NCZARR 2024-03-18 15:52:19 -05:00
Kyle Shores
ba2cf68597 Replace ENABLE_LARGE_FILE_TESTS with NETCDF_ENABLE_LARGE_FILE_TESTS 2024-03-18 15:52:07 -05:00
Kyle Shores
d270aa8e93 Replace ENABLE_DAP with NETCDF_ENABLE_DAP 2024-03-18 15:51:14 -05:00
Kyle Shores
2bce1e6776 Replace ENABLE_CDF5 with NETCDF_ENABLE_CDF5 2024-03-18 15:51:04 -05:00
Sean McBride
fb5c6b139c Auto fixed clang-tidy readability-uppercase-literal-suffix warnings 2024-03-01 20:46:58 -05:00
Sean McBride
4188db2817 Auto fixed clang-tidy readability-redundant-control-flow warnings 2024-03-01 20:46:58 -05:00
Sean McBride
0d82e3cd28 Auto fixed clang-tidy bugprone-suspicious-string-compare warnings 2024-03-01 20:46:58 -05:00
Kyle Shores
3526faa98d removing debug information 2024-02-23 09:01:28 -06:00
Kyle Shores
a73f4960e3 fixing a typo 2024-02-22 16:00:48 -06:00
Kyle Shores
dda2c2de69 merging main 2024-02-22 09:59:05 -06:00
Peter Hill
907e5cc43f
CMake: Use target_link_libraries with HDF5::HDF5 target 2024-02-16 10:51:20 +00:00
Kyle Shores
53887b2295 and now this 2024-02-15 16:51:38 -06:00
Kyle Shores
12120235b2 making netcdf link publicly to hdf5 includd directoriess 2024-02-14 10:40:53 -06:00
Kyle Shores
0a01ea62dd por que no los dos 2024-02-14 10:28:31 -06:00
Kyle Shores
5cc35dee1c maybe it's this one? 2024-02-14 10:24:25 -06:00
Kyle Shores
5eaa72cf35 trying to link to hdf5 2024-02-14 10:14:30 -06:00
Kyle Shores
d7e26cad6b there has to be a better way to debug this 2024-02-13 16:33:20 -06:00
Ward Fisher
25fc13bd80
Merge pull request #2840 from ZedThree/silence-ncdump-warnings 
Silence ncdump warnings
 2024-02-09 16:49:01 -07:00
Kyle Shores
0b78616ddb lowercase things 2024-02-09 16:27:18 -06:00
Ward Fisher
fff6e53854 Rebased on current Unidata/netcdf-c main branch. 2024-01-23 11:55:31 -08:00
Ward Fisher
13d9fc38c2
Merge branch 'main' into unity 2024-01-22 12:42:25 -08:00
Ward Fisher
42b3f5582e Added a comment block for future reference. 2024-01-22 12:37:35 -08:00
Ward Fisher
16bcb1ddb9 Merge branch 'silence-nclist-warnings' of https://github.com/ZedThree/netcdf-c into rebase-gh2812.wif 2024-01-19 11:11:21 -07:00
Peter Hill
700dfd29cc
Fix argument type on internal utility function 2024-01-15 15:46:14 +00:00
Peter Hill
0706278119
Remove unused argument from internal utility function 2024-01-15 15:46:13 +00:00
Peter Hill
ea5a0631c5
Fix misleading indentation on if/else statements 2024-01-15 15:46:13 +00:00
Peter Hill
b6eb730684
Silence various conversion warnings in ncdump 2024-01-15 15:46:13 +00:00
Peter Hill
409ca579ab
Fix return type on a couple of internal utility functions 2024-01-15 15:46:13 +00:00
Peter Hill
b94199874d
Fix returning wrong type 2024-01-15 15:46:13 +00:00
Peter Hill
472b30f313
Remove some unused variables 2024-01-15 15:46:13 +00:00
Peter Hill
a7552b4b83
Fix a couple of conversion warnings in shared nczarr/ncdump test 2024-01-15 13:57:22 +00:00
Julien Schueller
5537a60885 CMake: Add support for UNITY_BUILD 2024-01-12 10:18:29 +01:00
Ward Fisher
c1fb4b0bae
Merge pull request #2809 from ZedThree/silence-malloc-warnings 
Silence conversion warnings from `malloc` arguments
 2023-12-21 17:20:56 -07:00
Ward Fisher
2616e2c411
Merge pull request #2745 from e-kwsm/chmod-x 
chore: unset executable flag
 2023-12-11 17:28:46 -07:00
Ward Fisher
002e2869ab
Merge pull request #2691 from seanm/snprintf 
sprintf -> snprintf
 2023-12-11 15:46:51 -07:00
Sean McBride
4f15a9265e Removed a use of sprintf that required changing a function signature 2023-12-08 13:30:54 -05:00
Sean McBride
adc4dc1435 Replaced some sprintf with snprintf with aid of new variable containing size 
One case required slightly complicated accounting of how much space is left in the buffer.
 2023-12-08 13:30:38 -05:00