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c6f399c731
Commit Graph

45 Commits

Author SHA1 Message Date
Russ Rew
c6f399c731 Fix non-portable test that depends on nonstandardized floating-point format using e+08, not e+008. Fixes for some problems reported in scan-build static analysis. 2012-04-23 23:59:24 +00:00
Russ Rew
fa3fbbcc92 Fixes for NCF-150, bugs in libsrc4 with handling strings in non-netCDF-4 HDF5 files. Added new test in nc_test4 to verify fixes. 2012-04-20 15:42:55 +00:00
Dennis Heimbigner
5536bccee1 allow NC_DISKLESS with nc_open() to operate as a in-memory cache 2012-04-08 22:47:38 +00:00
Dennis Heimbigner
7e27052f87 - Implemented diskless files for both netcdf classic and extended. 
The in-memory files can be made persistent if nc_create is called with
  NC_DISKLESS|NC_WRITE flags set. Initial test case also included.
- Modified ncio mechanism to support
  multiple ncio packages; this is so we
  can have posixio and memio operating
  at the same time.
- cleanup up a bunch of lint issues (unused variables, etc).
 2012-03-26 01:34:32 +00:00
Dennis Heimbigner
99eef24bc2 - Fix NCF-158 to modify ncgen flag defaults. 
- Fix NCF-157 to modify DAP code to support
  partial variable retrieval.
- Fix of NCF-154 to solve problem of ncgen
  improperly processing data lists for variables
  of size greater than 2**18 bytes.
- Fix ncgen processing of char variables that have
  multiple unlimited dimensions.
- Partly fix Jira issue: NCF-145 (vlen issues).
- Benchmark program nc_test4/tst_ar4_*) requires arguments
  and should only be invoked inside a shell
  script; fixed so that they terminate cleanly
  if invoked with no arguments.
- Fix the Doxygen processing so it will work
  with make distcheck.
- Begin switchover to using an alternative to ncio.
- Begin support for in-memory (diskless) files.
 2012-03-14 23:26:48 +00:00
Russ Rew
07a5f4fd1a Peter Cao's valgrind fixes for nc4file.c 2012-03-14 03:48:30 +00:00
Russ Rew
22beaf407c Fix bug with scalar coordinate variables in netCDF-4 files, causing failure with --enable-extra-tests, [NCF-149] 2012-03-01 02:06:14 +00:00
Russ Rew
75e00f3341 Fix bug triggered by --enable-logging. 2012-02-27 23:00:07 +00:00
Russ Rew
fbbdeccc2e Fix performance bug for many variables or types in a group 2012-02-21 13:46:22 +00:00
Dennis Heimbigner
aebd11348a 1)Integrate the oc with improved performance 2012-01-29 18:56:29 +00:00
Ed Hartnett
59af73d256 removing executable flag 2011-10-04 15:59:40 +00:00
Ed Hartnett
9212be6606 took out fortran API, made some documentation changes 2011-08-11 17:54:34 +00:00
Ed Hartnett
2b2bcded42 removed cxx and cxx4, bumped version to 4.2, and fixed up documentation some 2011-08-10 18:00:32 +00:00
Ed Hartnett
b377906536 beginning of conversion to doxygen 2011-07-11 16:04:49 +00:00
Dennis Heimbigner
fec4cdb230 Fixed the following Jira minor bugs: 
NCF-42: _Format attribute sometimes being ignored
NCF-43: Fixed unsigned long long parsing.
NCF-47: Make opendap code properly handle illegal names like "x.y" by
        supressing them
NCF-49: check for uint type
NCF-50: properly handle username:pwd embedded in urls.
 2011-05-12 17:51:32 +00:00
Ed Hartnett
8559e6f976 added test that activates classic library bug 2011-04-25 17:09:14 +00:00
Ed Hartnett
882b48f017 fixed HDF5 object versioning so that all netCDF-4 files can be read by HDF5-1.8.x releases 2011-04-25 11:10:24 +00:00
Ed Hartnett
ff3abf1427 fixed some confusion about create mode flag NC_CLASSIC_MODEL 2011-02-23 23:39:25 +00:00
Ed Hartnett
2ebb1cbafc fixed problems with parallel I/O of classic files with pnetcdf library 2011-01-28 12:45:52 +00:00
Ed Hartnett
94210cb492 fixed HDF4 build memory problem 2010-12-06 16:27:08 +00:00
Ed Hartnett
edc5c64e54 optimized way special dimid is searched for when var is opened. 2010-12-02 23:52:53 +00:00
Ed Hartnett
184b2d0945 freed new path string for nc3 and nc4 files 2010-12-01 18:21:47 +00:00
Ed Hartnett
03f63a5f1c many changes for memory fixes 2010-11-29 22:23:16 +00:00
Dennis Heimbigner
c96133ded7 removed extraneous global variable 2010-11-24 23:12:20 +00:00
Dennis Heimbigner
b2c05fa4d0 fixed: 
ncgen: nan bug
       made semicolons optional after type decls
libncdap{3,4}: revamped the NC surrogate to better match
       with libsrc
libdispatch: Added a new_nc function to the dispatch table; its purpose
                 is to allow hierarchical use of NC compatible data structures.
libsrc: cleaned up the NC structure by removing drno field
general: removed --with-oc options
 2010-11-09 22:53:03 +00:00
Ed Hartnett
105fe5fed1 fixed extra-test bug, return code from nc_inq_var_* functions with bad ncids, bumped version to beta2 2010-09-24 15:55:54 +00:00
Ed Hartnett
54297ac014 changed way that netcdf-4 scans HDF5 file on open for big performance boost 2010-09-22 13:38:15 +00:00
Ed Hartnett
bf85289d71 commented out H5close call 2010-09-11 16:19:13 +00:00
Ed Hartnett
469731fd88 inq path works for netcdf-4 2010-08-19 18:15:48 +00:00
Ed Hartnett
1aedb82327 fixed some memory problems, more progress towards nc_inq_path 2010-08-19 17:37:29 +00:00
Ed Hartnett
a0e1b037e5 added nc_inq_path in dispatch tables 2010-08-18 15:11:17 +00:00
Dennis Heimbigner
dd4fe6d25c dispatch.h->ncdispatch.h to avoid visualstudio filename conflict 2010-08-05 02:44:59 +00:00
Dennis Heimbigner
c5cb1104b7 removed USE_DISPATCH and most uses of nc3 from libsrc4 2010-07-30 19:20:22 +00:00
Ed Hartnett
0c0576862d fix for out of order dimensions after enddef/redef, then definition of coordinate variables 2010-07-08 13:39:47 +00:00
Ed Hartnett
96970bba9e fixed HDF4 problem with allocated metadata storage 2010-07-06 14:56:28 +00:00
Ed Hartnett
eb9f666352 reduced memory use for dimensions in netcdf-4 2010-07-01 13:36:41 +00:00
Ed Hartnett
1d5bbb7cfa reduced memory use of type structs for netcdf-4 2010-07-01 13:17:54 +00:00
Ed Hartnett
ad5466af24 reduced memory use for attributes 2010-07-01 13:08:28 +00:00
Ed Hartnett
bc6c5a071b took out more per-variable memory for netCDF-4 files 2010-07-01 12:52:44 +00:00
Ed Hartnett
0e855e0dc5 more changes to make netcdf-4 use less memory per variable 2010-07-01 11:39:34 +00:00
Ed Hartnett
6db57b7f09 made var->chunksizes array allocated intead of fixed size, to improve memory performance of netCDF-4 2010-06-30 21:05:11 +00:00
Ed Hartnett
0b5fdedb12 fixed HDF5 error messages when file without creation ordering is opened 2010-06-30 15:34:31 +00:00
Ed Hartnett
4220dca07a broke out test into libsrc/tst_interops6.c to help find memory problem 2010-06-25 14:51:16 +00:00
Ed Hartnett
1e87ea9cbd fixed shared build problems 2010-06-09 16:01:32 +00:00
Ed Hartnett
18f4bca367 moving to trunk subdir 2010-06-03 13:24:43 +00:00