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Ward Fisher
bcadaf3839
Merge pull request #1980 from opoplawski/test 
Fix tst_h_atts3 for hdf5 1.12
 2021-04-12 16:07:24 -06:00
Orion Poplawski
9fc8ae62a8 Fix tst_h_atts3 for hdf5 1.12 2021-04-10 19:51:58 -06:00
Ward Fisher
e38078d14f
Merge pull request #1952 from DennisHeimbigner/nczarr_xarray.dmh 
Add support for the XArray Zarr _ARRAY_DIMENSIONS attribute
 2021-04-08 13:01:29 -06:00
Dennis Heimbigner
02bca8fae7 force tests to rerun 2021-04-02 19:05:58 -06:00
Dennis Heimbigner
0454d8e235 Addendum: This PR has been extended to include 
interoperability fixed. We were given a Zarr format dataset
stored as a directory+file tree. This dataset uses the XArray
conventions and was generated by some non-Unidata Zarr implementation.
In attempting to process it with NCZarr, several interoperability
problems were discovered and fixed. This gives us more confidence
that NCZarr -- using pure zarr -- can interoperate with other
Zarr implementations.

Specific changes:
* Add test nczarr_test/run_interop.sh
* Support attributes with single value not enclosed in JSON array tags.
* Add mode inferencing and use it in nczarr_test/run_purezarr.sh
* Reduce size of tst_err_enddef.nc because it is more than 3 GB.
 2021-04-02 18:39:50 -06:00
Dennis Heimbigner
727dd6861e Merge branch 'master' into nczarr_xarray.dmh 2021-04-02 18:29:39 -06:00
Ward Fisher
9bf69804a1
Merge pull request #1976 from Unidata/gh1969.wif 
PR1970 + Release Notes
 2021-04-02 11:22:34 -06:00
Ward Fisher
37f69e1f74 Updated release notes. 2021-04-02 10:54:24 -06:00
Ward Fisher
acc8e769ee Merge branch 'bzip2108.dmh' of https://github.com/DennisHeimbigner/netcdf-c into gh1969.wif 2021-04-02 10:53:31 -06:00
Dennis Heimbigner
e038553abe Update RELEASE_NOTES.md 2021-04-01 14:12:49 -06:00
Dennis Heimbigner
e7c4e7ead1 add zjson fix 2021-04-01 13:56:04 -06:00
Ward Fisher
f01e4f1027
Merge pull request #1975 from Unidata/gh1962.wif 
Refactored the HDF5 version detection logic in CMakeLists.txt
 2021-04-01 13:04:41 -06:00
Ward Fisher
ad51b0a79a Updated release notes, made if-block syntax more verbose. 2021-04-01 11:46:44 -06:00
Ward Fisher
35bf5f4b79 Corrected a typo. 2021-04-01 11:43:15 -06:00
Ward Fisher
17b4c2bebb Refactored the HDF5 version detection logic in CMakeLists.txt in support of https://github.com/Unidata/netcdf-c/issues/1962 2021-04-01 11:24:11 -06:00
Ward Fisher
5b40de1267
Merge pull request #1974 from gsjaardema/patch-49 
Fix use of ininitialized CMake variable
 2021-04-01 09:43:00 -06:00
Greg Sjaardema
6118776d60
Fix use of ininitialized CMake variable 
The `ISCMAKE` was defined after its first use in a `configure_file` call.  Moved to before its first use.
 2021-04-01 08:13:13 -06:00
Ward Fisher
790a1a2a06
Merge pull request #1961 from Unidata/4.8.0-wellspring.wif 
Selectively merge relevant changes and updates back upstream from the 4.8.0 prep branch.
 2021-03-30 16:40:55 -06:00
Dennis Heimbigner
395f47a9b3 Update the bzip library in plugins to version 1.0.8 
re: Issue https://github.com/Unidata/netcdf-c/issues/1969
 2021-03-30 15:27:24 -06:00
Ward Fisher
670fd2482f Corrected typo preventing success when running make dist or make distcheck 2021-03-30 14:08:00 -06:00
Ward Fisher
cf5fc9b0f7 Updated doxyfile to include libnczarr/zarr.c, also removed references to files that have been removed. 2021-03-30 13:53:16 -06:00
Ward Fisher
90c662c58f Corrected release date in preparation for today's release. 2021-03-30 10:08:05 -06:00
Ward Fisher
95719addd2 Added 1.0.1 to test matrix in support of https://github.com/Unidata/netcdf-c/pull/1931#issuecomment-804312933 2021-03-26 14:50:22 -06:00
Ward Fisher
85f3abb515 Updated expected release date. 2021-03-26 14:47:53 -06:00
Ward Fisher
ac4ade4f18 Merge branch '4.8.0-wellspring-prs.wif' into 4.8.0-wellspring.wif 2021-03-22 16:59:15 -06:00
Ward Fisher
4a7f5aeef2 Added check for H5Literate symbol (hdf5 1.8.x, 1.10.x) or macro (1.12.x)) in support of https://github.com/Unidata/netcdf-c/issues/1965 2021-03-22 13:40:11 -06:00
Ward Fisher
094e2a4ea3 Amend check for H5Literate to work with 1.10.x 2021-03-22 13:24:03 -06:00
Ward Fisher
3e0b36a355 Added check for H5Literate in support of https://github.com/Unidata/netcdf-c/issues/1965 2021-03-22 13:05:23 -06:00
Ward Fisher
fc4bfc6196 Merge branch 'dispatchversion.dmh' of https://github.com/DennisHeimbigner/netcdf-c into 4.8.0-wellspring-prs.wif 2021-03-22 12:41:03 -06:00
Ward Fisher
f75c1c4d7b
Merge branch 'master' into dispatchversion.dmh 2021-03-22 12:40:09 -06:00
Ward Fisher
dab186b688 Merge branch '4.8.0-wellspring.wif' of github.com:Unidata/netcdf-c into 4.8.0-wellspring.wif 2021-03-22 12:38:24 -06:00
Ward Fisher
ffa8a7067f Merge branch '951' of https://github.com/brtnfld/netcdf-c into 4.8.0-wellspring-prs.wif 2021-03-22 11:51:54 -06:00
Ward Fisher
379681ff55 Merge branch 'patch-47' of https://github.com/gsjaardema/netcdf-c into 4.8.0-wellspring.wif 2021-03-22 11:48:10 -06:00
Ward Fisher
98abfb7749 Bumped version numbers to next development version. 2021-03-19 11:49:09 -06:00
Ward Fisher
7535a9c98f Updated SO version in cmakelists.txt in preparation for the 4.8.0 release. 2021-03-19 11:30:38 -06:00
Ward Fisher
c12d80a59b Updated SO version in preparation for public release. 2021-03-19 10:36:13 -06:00
Ward Fisher
2499a540a5 Merge branch 'patch-47' of https://github.com/gsjaardema/netcdf-c into 4.8.0-wellspring.wif 2021-03-18 14:51:18 -06:00
Greg Sjaardema
7732ef1c88
Fix if statement to apply to fflush 
Even though the `fflush()` is on the same line as the `fprintf(stderr, ...` statement, it is not part of the `if` and is therefore, executed even if the `wdebug` is not active.  This results in `fflush()` being called more than it should.  

Added parenthesis to property protect the fflush call.
 2021-03-18 13:49:07 -06:00
Ward Fisher
a9ba3c53b1
Merge pull request #1960 from ibaned/cmake-have-mpi-info 
HAVE_MPI_INFO_F2C was missing from CMake config.h
 2021-03-17 16:14:26 -06:00
Ward Fisher
7de6da8fee Address a C99 forward-declaration issue. 2021-03-17 11:21:23 -06:00
Ward Fisher
34e63705a6 Restored cleanup stanza in tst_filter.sh 2021-03-17 10:34:37 -06:00
Ward Fisher
3b4c04d87f Merge branch 'master' into 3.8.0-wellspring.wif 2021-03-16 10:42:11 -06:00
Dan Ibanez
455fa214d2 HAVE_MPI_INFO_F2C was missing from CMake config.h 2021-03-12 12:33:05 -07:00
Ward Fisher
ca4d0fa087
Merge pull request #1957 from bartoldeman/master 
Add HAVE_MPI_INFO_F2C to cmake config.h input file
 2021-03-11 16:38:41 -07:00
Ward Fisher
ec069646b8 Merge branch '4.8.0-wellspring.wif' of github.com:Unidata/netcdf-c into 4.8.0-wellspring.wif 2021-03-09 13:40:23 -07:00
Ward Fisher
6b2f25818f Fix tst_filter.sh such that it returns an error immediately on failure. 2021-03-09 13:40:12 -07:00
Ward Fisher
2a02e5a32b More modification in support of #1940 2021-03-09 10:49:30 -07:00
Ward Fisher
c5d2937889 Correct bash test failure on Windows in MSYS2 bash shell with Visual Studio-based build, in support of https://github.com/Unidata/netcdf-c/issues/1940 2021-03-08 15:10:50 -07:00
Ward Fisher
c31d5ac655
Merge pull request #1958 from DennisHeimbigner/pathmgmt.dmh 
Codify cross-platform file paths
 2021-03-08 11:23:14 -07:00
Dennis Heimbigner
471268f632 Update RELEASE_NOTES 2021-03-04 13:45:44 -07:00