Commit Graph

1214 Commits

Author SHA1 Message Date
Ward Fisher
b4e198d163 Added '--enable-dynamic-loading' to autotools-based builds, and
-DENABLE_DYNAMIC_LOADING to cmake-based builds.

This will allow for compatibility with hdf5 1.8.11 builds that
have enabled dynamic building (depends on libdl).

See Jira ticket NCF-258
2013-06-10 21:48:11 +00:00
Ward Fisher
3c7895add1 Updated CMake-related documentation in generated websites with more detail. 2013-06-04 17:33:21 +00:00
Ward Fisher
33d3d06971 Added initial 'make dist', 'make distcheck' support to
CMake-based builds.
2013-06-03 16:42:04 +00:00
Russ Rew
946a7ab8b5 Fix contributed by Nath Gopalaswamy to large file problem reading
netCDF classic or 64-bit offset files that have a UINT32_MAX flag for
large last record size of a variable that has values larger than 1
byte.  This problem had previously been fixed for *writing* such data,
but was only tested with an ncbyte variable.  Fixed test to
demonstrate problem and the fix.

More updates to chunking documentation, cosmetic fixes for some
"--option=" documentation that doxygen turns into mdash.
2013-05-31 20:18:18 +00:00
Russ Rew
3152893da0 Updated documentation on default chunk size for unlimited dimensions.
Removed old heuristic for dims several orders of magnitude smaller
than the max dimension.
2013-05-28 15:34:55 +00:00
Ward Fisher
da16fc1cde Fixed an issue with Windows builds
not compiling due to how
ssize_t was being detected/defined.
2013-05-24 21:19:07 +00:00
Ward Fisher
1df00fa579 Re-added fix for very small files. 2013-05-22 18:56:52 +00:00
Ward Fisher
2c63696151 Modified config.h template used by cmake to properly
check for existance of ssize_t.
2013-05-22 16:30:54 +00:00
Russ Rew
2cd6e5f7aa Update building parallel doc to show what worked here 2013-05-17 20:34:36 +00:00
Dennis Heimbigner
228e8439d2 1. The code to parse a constraint
was losing the initial double quote
for a quoted string.
2. The code in ncuri.c was not properly
   handling occurrences of e.g. %xx
2013-05-16 21:37:58 +00:00
Dennis Heimbigner
ce290d3459 Fix Jirs 255
The DAP code compiles constraints into an internal
tree form. When it goes to fetch data, it converts
that tree form into a string suitable for use in a url.
The tree->string code was using '<' when it should be
using '<=' and vice versa.
The fix is to make sure the right operator is used.
2013-05-16 18:22:17 +00:00
Dennis Heimbigner
254c0e7c96 Historically
ncgen3 and ncgen
have treated 
uppercase atomic types
the same as lower case.
Change so upper case are no
longer allowed.

Also, synch oc.
2013-05-15 17:37:04 +00:00
Dennis Heimbigner
253a26cb82 change format of url parameters in fragment part 2013-05-13 19:12:37 +00:00
Dennis Heimbigner
63141b80d5 updated the dap description in guide.doc 2013-05-13 18:22:14 +00:00
Dennis Heimbigner
f14c884918 1. Moved all the PNETCDF code
(primarily from libsrc4)
   into its own dispatch library
   called libsrc5.

2. Fixed part of Jira NCF-253
   by removing the need for the
   pnetcdf_ndims field.
   For some reason, the original
   code tried to cache the variable
   ranks rather than computing them
   as needed. Fixed by doing
   an ...inq_varndims call as needed.

3. found some places where NC_MAX_DIMS
   was being stack allocated and changed
   to heap allocation.
   Still some cases in nc_test4.
2013-05-11 21:01:18 +00:00
Dennis Heimbigner
7407566608 2013-05-11 20:46:54 +00:00
Dennis Heimbigner
0df0766ab8 2013-05-11 20:46:28 +00:00
Dennis Heimbigner
111e20d09c cleanup 2013-05-11 20:32:39 +00:00
Dennis Heimbigner
5be772b6c0 1. Moved all the PNETCDF code
(primarily from libsrc4)
   into its own dispatch library
   called libsrc5.

2. Fixed part of Jira NCF-253
   by removing the need for the
   pnetcdf_ndims field.
   For some reason, the original
   code tried to cache the variable
   ranks rather than computing them
   as needed. Fixed by doing
   an ...inq_varndims call as needed.

3. found some places where NC_MAX_DIMS
   was being stack allocated and changed
   to heap allocation.
   Still some cases in nc_test4.
2013-05-11 20:04:33 +00:00
Dennis Heimbigner
de34ed2d5b merge from netcdf/trunk prior to merge back to trunk 2013-05-11 19:37:38 +00:00
Dennis Heimbigner
3b0fb5bd82 Synch oc2 with baseline oc2.0 2013-05-11 19:36:31 +00:00
Dennis Heimbigner
79215c77ae Allow dapodom.[ch] to be used in tests 2013-05-11 19:34:54 +00:00
Ward Fisher
5ebc2a38ee Corrected a type in the Building with Cmake help file. 2013-05-10 22:55:54 +00:00
Dennis Heimbigner
cc7cd9a142 Fix part of JIRA NCF-253.
libdispatch/dv2i.c
now heap allocates rs[NC_MAX_VARS]
instead of stack allocation.
2013-05-10 18:15:11 +00:00
Dennis Heimbigner
c583f91992 merge with trunk and fix conflicts 2013-05-10 17:04:28 +00:00
Ward Fisher
df9a54b689 o Fixed the SOVERSION for CMake-based builds.
o Updated autotools-based build to include files required for CMake-based 
builds.

o Updated Markdown-based documentation processed by Doxygen to include a
CMake FAQ.
2013-05-08 21:59:11 +00:00
Ward Fisher
aecd090f53 Added markdown version of RELEASE_NOTES for evaluation.
Modified Doxyfile templates to generate html from the
markdown file (assumes doxygen version 1.8+)

Added link to release notes to mainpage.doc
2013-05-07 20:54:54 +00:00
Ward Fisher
d7c0bed683 Updated RELEASE_NOTES in trunk to include release notes for 4.2.1.1 2013-05-07 16:37:23 +00:00
Ward Fisher
92f2ccc558 Reordered RELEASE_NOTES to bring a configuration change to the top of the list. 2013-05-03 21:11:12 +00:00
Ward Fisher
62b9141af1 Reverting the delete from the tm2.pl script. 2013-05-03 20:54:43 +00:00
Ward Fisher
2d0dbcfa1d Merged latest from CMake branche.
Fixed an error on very small files (< 4 bytes) that was only occuring on sol. Updated CMake configuration file.
2013-05-01 23:55:24 +00:00
Dennis Heimbigner
19c1c11f1d It turns out that my dap code
is not properly checking the incoming
count argument for nc_get_vars.
It is treating the count as pre-stride
rather than post-stride.
2013-05-01 22:31:01 +00:00
Russ Rew
5944c71c51 Oops, forgot to remove --disable-shared from build example 2013-05-01 21:07:22 +00:00
Russ Rew
6c28f30789 Update documentation for building with HDF4 and with Fortran 2013-05-01 21:05:31 +00:00
Russ Rew
f424c28710 Thwart doxygen's conversion of configure option '--disable-' to '&amp;ndash;disable-' garbage in resulting HTML document. 2013-05-01 15:46:55 +00:00
Dennis Heimbigner
77d27faaef suppress useless test output from test_nstride_cached.c 2013-04-30 18:34:31 +00:00
Ward Fisher
7d8bee2320 Updated version number to 4.3.0 2013-04-29 20:23:42 +00:00
Ward Fisher
10807379c3 Merging from CMake branch in preparation for 4.3.0 release. 2013-04-29 20:15:57 +00:00
Russ Rew
920393b891 Update nccopy documentation for -v and -g options 2013-04-25 20:50:59 +00:00
Russ Rew
07154a6693 Fix 'Building with HDF4 Support' document 2013-04-24 22:44:17 +00:00
Dennis Heimbigner
4070bcf946 Fix (again) jira NCF-248.
So, it turns out that just freeing
the nc4_info is not enough;
The root group must also be reclaimed.
So, it appears the best approach
is to invoke an abort on the
failed file.
2013-04-24 22:11:44 +00:00
Ward Fisher
2ee115d4e1 Removing files that accidentally migrated from CMake branch. 2013-04-24 19:45:25 +00:00
Ward Fisher
67f96188ff Merged latest from netCDF-cmake branch in preparation for 4.3.0 release. 2013-04-23 21:50:07 +00:00
Dennis Heimbigner
e3a4a617cf Add test for Jira NCF-249 2013-04-23 21:06:14 +00:00
Dennis Heimbigner
7e8bfb01f3 Fix jira NCF-249 2013-04-23 20:18:16 +00:00
Dennis Heimbigner
e960416761 Fix JIRA NCF-248 2013-04-23 18:02:35 +00:00
Russ Rew
3a87936711 New RELEASE_NOTES entry and a couple of Coverity fixes. 2013-04-23 16:27:28 +00:00
Russ Rew
e1c8870fea Renamed internal function. 2013-04-22 22:58:43 +00:00
Russ Rew
6ebc98d254 Fix NCF-247 bug, and add test for bug fix. 2013-04-22 22:34:21 +00:00
Dennis Heimbigner
f17e7324c1 Rebuilt the compose operation in dceconstraints.c. The
revisions are simpler, and I hope, clearer than the all
previous versions.  Part of the code taken from the
ucar.nc2.Range.compose function.  Modified to handle edge
cases not handled in the Range.compose function.
2013-04-19 19:55:43 +00:00