Wei-keng Liao
cb7aafa805
fix issue 791: validate ncid for classic files
2018-01-25 00:03:19 -06:00
Ward Fisher
7f1f02c96d
Additional tweaks for make dist.
2018-01-24 18:05:30 -07:00
Ward Fisher
d0339c8902
Merge branch 'pr-catchup' into v4.6.0-release-branch
2018-01-24 15:51:24 -06:00
Ward Fisher
ca814c17f0
Added fenceposts for filter testing.
2018-01-23 18:18:58 -06:00
Dennis Heimbigner
3e47f5f300
Rebuilt the filter parameter handling code to use a common
...
parser everywhere.
2018-01-23 16:00:11 -07:00
Ward Fisher
aac9fad1c4
Merge branch 'ejh_develop_3' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into pr-catchup
2018-01-23 15:32:19 -06:00
Wei-keng Liao
d0c2015ced
fix tst_converts.c when enable-erange-fill is set
2018-01-20 15:44:04 -06:00
Ed Hartnett
c329298dc5
merged 760
2018-01-20 07:31:42 -07:00
Ed Hartnett
ef65bdf9af
merged 786
2018-01-20 06:06:25 -07:00
Ed Hartnett
da928c1b83
merged 780
2018-01-20 06:05:34 -07:00
Ed Hartnett
9fcc6b62fd
merged 769
2018-01-20 06:05:17 -07:00
Dennis Heimbigner
22ebecab23
Use an explicit can_apply function for filters
2018-01-19 18:45:56 -07:00
Dennis Heimbigner
991c4c6d16
Add some extra nccopy filter debug output
2018-01-19 12:06:02 -07:00
Dennis Heimbigner
e723d7dfed
Merge branch 'plugins.dmh' of https://github.com/Unidata/netcdf-c into plugins.dmh
2018-01-19 10:58:46 -07:00
Ed Hartnett
986673ff49
attempted to fix parallel build issue
2018-01-19 06:53:04 -07:00
Ed Hartnett
2f7625d19a
more test development
2018-01-19 05:19:15 -07:00
Ed Hartnett
196a0b574a
more test development
2018-01-19 05:11:07 -07:00
Ed Hartnett
4be1fd82e6
further test development
2018-01-19 04:16:59 -07:00
Ed Hartnett
bc1f103c3d
cleaned up h5 checks in nc4grp.c
2018-01-19 03:37:49 -07:00
Ed Hartnett
3f83998b26
Merge branch 'master' into ejh_rename2
2018-01-18 16:05:04 -07:00
Ward Fisher
0f5fc7222b
Merge branch 'master' into plugins.dmh
2018-01-18 15:46:50 -07:00
Ed Hartnett
126d34da1d
more tests, error handling
2018-01-18 07:36:52 -07:00
Ed Hartnett
38c7cddf8f
further test development, added documentation for uncommitted user-defined types, fixed check of return value
2018-01-18 06:47:50 -07:00
Ed Hartnett
466fac5381
more test development
2018-01-18 05:57:33 -07:00
Ed Hartnett
001483505f
rehabilitated tst_types.c
2018-01-18 05:34:52 -07:00
Dennis Heimbigner
090fc98ac9
Merge branch 'plugins.dmh' of https://github.com/Unidata/netcdf-c into plugins.dmh
2018-01-17 19:48:10 -07:00
Dennis Heimbigner
8d8dff9a2a
Add some temporary debugging output
2018-01-17 19:47:54 -07:00
Ward Fisher
62abc6af09
Updated CMakeLists.txt to correct an issue seen on OSX when using cmake and running 'make test' directly from nc_test4
2018-01-17 14:00:52 -07:00
Ed Hartnett
9949a11155
removed some unneeded HDF4 checks, added some needed parameter checks
2018-01-17 09:09:58 -07:00
Ward Fisher
ac5aabc3fc
Tweaked for parallel autoconf tests with filters.
2018-01-16 17:49:21 -07:00
Ward Fisher
f7b4c61c69
Updated test for OSX
2018-01-16 17:07:52 -07:00
Ward Fisher
606b782adf
Corrected a build issue on OSX
2018-01-16 16:39:58 -07:00
Ed Hartnett
e6f82ae397
further test development
2018-01-16 14:57:40 -07:00
Ed Hartnett
3af0e84314
test development
2018-01-16 14:38:09 -07:00
Ed Hartnett
3a0385da3e
test development
2018-01-16 14:36:47 -07:00
Dennis Heimbigner
70068d7d32
With Ward's help, I figured out how to
...
obviate the need for build type under
cmake+Visual-studio. This simplified
findplugin.in.
2018-01-16 13:28:30 -07:00
Dennis Heimbigner
99fccab359
1. Keep up to date by merging master
...
2. Fixed plugin building (nc_test4/hdf5plugins)
to be done properly by cmake and automake.
4. Duplicated part of the nc_test4 filter test code
in examples/C
An incomplete and untested set of hooks exist
for OS-X in nc_test4/findplugins.in. They need testing.
2018-01-16 11:00:09 -07:00
Ed Hartnett
3626c776ae
test development
2018-01-16 09:43:41 -07:00
Ed Hartnett
0862d6d7ce
removed MPE calls
2018-01-16 09:23:36 -07:00
Ed Hartnett
d77ac20af4
more test cleanup
2018-01-16 08:14:43 -07:00
Ed Hartnett
f603ab2163
more test cleanup
2018-01-16 08:09:14 -07:00
Ed Hartnett
ba518b80a7
more test cleanup
2018-01-16 08:09:03 -07:00
Ed Hartnett
f716ac8549
more test cleanup
2018-01-16 08:06:23 -07:00
Ed Hartnett
1bd6387e5e
clean up of test
2018-01-16 08:04:00 -07:00
Ed Hartnett
de150aec4e
clean up of test
2018-01-16 08:03:15 -07:00
Ed Hartnett
3fa3d3f9f9
ported rename fix changes from branch ejh_fill_values for easy merging
2018-01-05 06:01:22 -07:00
Levi Naden
978e83d28a
Fix another test typo
2018-01-02 11:43:15 -05:00
Levi Naden
6a24ca4366
Fix typo
2018-01-02 11:39:09 -05:00
Levi Naden
f6fc9c183b
Allow multiple vars with different chunks on the same unlimited dim
...
Fix #299
The conditions to make this error are the following:
* Two variables with different chunk sizes
* Both variables write on the same unlimited dimension
* The first variable has already written data when the second variable is created
2018-01-02 11:37:01 -05:00
Ward Fisher
77cca75977
Merge branch 'master' into ejh_more_tests
2017-12-07 20:24:43 -07:00
Ward Fisher
0ef6f3415a
Making tst_hdf4_read_var.sh dependent on tst_interops2.
2017-12-06 15:07:54 -07:00
Ed Hartnett
ea49cc1d3f
merged ejh_notbuilt_errors
2017-12-04 13:23:31 -07:00
Ed Hartnett
2066232dc0
more tests, more interanl documentation
2017-12-03 06:05:37 -07:00
Ed Hartnett
bf6dab14e0
fixed error value from nc4_find_g_var_nc() when ncid is bad
2017-12-03 04:06:56 -07:00
Ed Hartnett
9e4c564656
more tests
2017-12-02 18:00:22 -07:00
Ed Hartnett
8055c1cede
more tests
2017-12-02 17:43:46 -07:00
Ed Hartnett
996e39373f
more test
2017-12-02 15:52:49 -07:00
Ed Hartnett
1cf8177f45
more test
2017-12-02 15:43:40 -07:00
Ed Hartnett
ea63ff526f
more tests
2017-12-02 08:05:17 -07:00
Ed Hartnett
bfeb8d4e0b
more testing
2017-12-02 07:38:01 -07:00
Ed Hartnett
7cd344f7b0
removed redundant check in NC4_def_var()
2017-12-02 07:23:23 -07:00
Ed Hartnett
6c3aa79684
more testing of nc_set_var_chunk_cache_ints
2017-12-02 07:15:19 -07:00
Ed Hartnett
d840bc7160
starting adding testing for _int() functions for caching
2017-12-02 06:52:13 -07:00
Ed Hartnett
300236cd8c
more tests
2017-12-01 15:08:22 -07:00
Ed Hartnett
58f422e2a8
more tests
2017-12-01 14:33:32 -07:00
Ed Hartnett
acbd3e259e
more tests
2017-12-01 13:58:13 -07:00
Ed Hartnett
ded01e0aba
more tests
2017-12-01 13:15:58 -07:00
Ed Hartnett
a8e9c196e2
more tests, fixed documentation warnings
2017-12-01 13:02:59 -07:00
Ed Hartnett
42c482d33c
more tests
2017-12-01 11:20:09 -07:00
Ed Hartnett
ce1df112a5
more testing for nc4var.c functions
2017-12-01 09:38:32 -07:00
Ed Hartnett
2023ed6b7c
fixed problems with bad inputs to nc_def_Var
2017-12-01 09:08:12 -07:00
Ed Hartnett
34c9248e6f
Merge branch 'master' into ejh_notbuilt_errors
2017-11-28 17:16:56 +00:00
Ed Hartnett
3c5404ccf7
Merge branch 'master' into ejh_ncfunc_testing
2017-11-28 00:04:38 +00:00
Ed Hartnett
ce97137318
removed properties from tst_interops3 which is no longer a test in CMake build
2017-11-26 09:07:34 -07:00
Ed Hartnett
bebe7e1e9d
merged master
2017-11-26 07:06:02 -07:00
Nehal J Wani
1b91bd89d4
Fix build on pre-C99 compilers
...
- Make sure that the variables are declared at the top of the block.
- Add fix to enable inline for various compilers
2017-11-26 01:47:54 +05:30
Ed Hartnett
8011fab382
now run tst_large2, also cleaned up some more warnings
2017-11-24 10:50:07 -07:00
Ed Hartnett
273b1d5bf9
merged ejh_check_test
2017-11-24 10:12:54 -07:00
Ed Hartnett
fa7f17a8c8
got cmake working with HDF4 format test
2017-11-24 06:05:55 -07:00
Ed Hartnett
b4bccb60b3
fixing test order problem
2017-11-23 07:18:12 -07:00
Ed Hartnett
60d1d6271d
fixing order in CMake
2017-11-23 04:52:19 -07:00
Ed Hartnett
843db9798f
finally got my distcheck act together by moving hdf4 file test to nc_test4
2017-11-23 04:41:03 -07:00
Ward Fisher
394ee6a1e0
Corrected typo, more enhancements in CMakeLists.txt
2017-11-22 13:34:56 -07:00
Ed Hartnett
d64550d3f0
Merge branch 'master' into ejh_notbuilt_errors
2017-11-22 17:14:24 +00:00
Ed Hartnett
3a48f59de3
removed legacy test that was no longer being run
2017-11-21 19:46:05 -07:00
Ed Hartnett
c8a2d53d34
fixes HDF4 build with cmake
2017-11-20 08:25:47 -07:00
Ed Hartnett
eecade6af9
Merge branch 'master' into ejh_notbuilt_errors
2017-11-18 21:24:11 +00:00
Ed Hartnett
d7c1dd82c3
fixed hdf4 test that should not run if utilities not built
2017-11-18 07:36:24 -07:00
Ed Hartnett
3b0c301d76
moved tst_bug324 in Cmake build from ncdump to nc_test4
2017-11-16 11:57:39 -07:00
Ed Hartnett
4f43b80320
moved test from ncdump to nc_test4
2017-11-16 11:30:35 -07:00
Ed Hartnett
7a2d62afe4
merging branches into develop
2017-11-15 11:26:29 -07:00
Ed Hartnett
83c2395238
merging branches into develop
2017-11-15 11:25:42 -07:00
Ed Hartnett
2baf95e09d
Merge branch 'master' into ejh_turn_tests_on
2017-11-15 03:40:56 -07:00
Ed Hartnett
92a995e521
Merge branch 'master' into ejh_large_file_test_3
2017-11-15 03:39:42 -07:00
Ed Hartnett
e928964e9e
Merge branch 'master' into ejh_notbuilt_errors
2017-11-15 03:38:49 -07:00
Ed Hartnett
0e58aa412d
fixed memory leak in tst_filterparser
2017-11-14 09:05:35 -07:00
Ward Fisher
16d6f94f30
Merge branch 'master' into filters.dmh
2017-11-13 11:15:02 -07:00
Ed Hartnett
03753c0344
now return NC_ENOTBUILT for not built library features
2017-11-13 08:09:15 -07:00
Ed Hartnett
cb32451cf5
turned on some commented out test code
2017-11-10 05:01:32 -07:00
Ed Hartnett
df31f07830
Merge branch 'master' into ejh_make_j_3
2017-11-10 02:53:07 -07:00
Ward Fisher
a9dde277d7
Merge branch 'ejh_enum_mem_fix' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into more_ejh_pulls
2017-11-09 16:11:17 -07:00
Ed Hartnett
e792d992b1
fixed names of output files to enable parallel builds
2017-11-09 07:21:00 -07:00
Ed Hartnett
b9911d6e6f
took out most uses of EXTRA_TESTS, returned it to disabled by default
2017-11-08 13:25:23 -07:00
Ed Hartnett
6653eeaf7f
Merge branch 'master' into ejh_turn_tests_on
2017-11-07 18:35:16 -07:00
Ed Hartnett
a72d5b4d16
Merge branch 'master' into ejh_enum_mem_fix
2017-11-07 18:34:55 -07:00
Ward Fisher
e7fee3ee53
Corrected an issue encountered by the default compiler on ARM.
2017-11-07 15:19:07 -07:00
Ward Fisher
b92ae0cdbc
Merge branch 'ejh_fix_use_cdf' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into more_ejh_pulls
2017-11-07 14:14:10 -07:00
Ed Hartnett
c58bc3e41c
fixed warnings
2017-11-06 06:06:47 -07:00
Ed Hartnett
7af77fd6a9
Merge branch 'master' into ejh_turn_tests_on
2017-11-05 10:09:08 -07:00
Ed Hartnett
6ce15853d6
fixed ENABLE_CDF5 issue in some tests
2017-11-05 09:06:48 -07:00
Ed Hartnett
7872785cf0
Merge branch 'master' into ejh_enum_mem_fix
2017-11-03 19:44:40 -06:00
Ward Fisher
f98635be1b
Merge remote-tracking branch 'origin/h5offset.dmh' into dmh_multi_merge
2017-11-03 12:40:52 -06:00
Ed Hartnett
b257353b18
fixed commented out tests
2017-11-03 08:14:08 -06:00
Ed Hartnett
406e979fb4
fixed tst_enums memory issue
2017-11-01 04:31:12 -06:00
Ed Hartnett
86f35ea6db
Merge branch 'master' into ejh_more_mem_3
2017-10-30 07:34:52 -06:00
Dennis Heimbigner
2d77e6451b
Master merge
2017-10-28 14:06:39 -06:00
Dennis Heimbigner
261ed4c99d
Merge branch 'master' into h5offset.dmh
2017-10-27 12:33:17 -06:00
Ed Hartnett
9f72f5adf4
fixed memory error in tst_fills2.c
2017-10-27 06:26:36 -06:00
Ed Hartnett
22d3d152f0
removed tst_h_atts2.c
2017-10-26 04:55:30 -06:00
Ed Hartnett
30ef103a95
moved tests from tst_h_atts2 into tst_xplatform2
2017-10-26 04:49:57 -06:00
Ward Fisher
8e30bb9a1c
Merge branch 'ejh_test_mem_leak' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into merge_small_pulls
2017-10-25 11:01:25 -06:00
Ward Fisher
fb38f81243
Merge branch 'ejh_ncdump' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into merge_small_pulls
2017-10-25 11:00:20 -06:00
Dennis Heimbigner
9983b9d911
re e-support UBS-599337
...
re pull request https://github.com/Unidata/netcdf-c/pull/405
re pull request https://github.com/Unidata/netcdf-c/pull/446
Notes:
1. This branch is a cleanup of the magic.dmh branch.
2. magic.dmh was originally merged, but caused problems with parallel IO.
It was re-issued as pull request https://github.com/Unidata/netcdf-c/pull/446 .
3. This branch + pull request replace any previous pull requests and magic.dmh branch.
Given an otherwise valid netCDF file that has a corrupted header,
the netcdf library currently crashes. Instead, it should return
NC_ENOTNC.
Additionally, the NC_check_file_type code does not do the
forward search required by hdf5 files. It currently only looks
at file position 0 instead of 512, 1024, 2048,... Also, it turns
out that the HDF4 magic number is assumed to always be at the
beginning of the file (unlike HDF5).
The change is localized to libdispatch/dfile.c See
https://support.hdfgroup.org/release4/doc/DSpec_html/DS.pdf
Also, it turns out that the code in NC_check_file_type is duplicated
(mostly) in the function libsrc4/nc4file.c#nc_check_for_hdf.
This branch does the following.
1. Make NC_check_file_type return NC_ENOTNC instead of crashing.
2. Remove nc_check_for_hdf and centralize all file format checking
NC_check_file_type.
3. Add proper forward search for HDF5 files (but not HDF4 files)
to look for the magic number at offsets of 0, 512, 1024...
4. Add test tst_hdf5_offset.sh. This tests that hdf5 files with
an offset are properly recognized. It does so by prefixing
a legal file with some number of zero bytes: 512, 1024, etc.
5. Off-topic: Added -N flag to ncdump to force a specific output dataset name.
2017-10-24 16:25:09 -06:00
Ed Hartnett
1e3831f98d
fixed memory leak and warnings in test
2017-10-24 12:54:29 -06:00
Ed Hartnett
6363cae315
fixed warnings
2017-10-24 12:18:20 -06:00
Ed Hartnett
d6eb9f9f5c
fix for tst_vars.c memory overflow
2017-10-24 09:20:41 -06:00
Dennis Heimbigner
0b87770dab
add files to git
2017-10-10 16:38:35 -06:00
Dennis Heimbigner
111248e067
Changed to make little-endian the standard for 64-bit parameters
2017-10-10 11:21:01 -06:00
Dennis Heimbigner
5ff3909704
Fix bug in nc4file.c where it improperly handled filters with more than 4 parameters.
2017-10-09 21:24:56 -06:00
Dennis Heimbigner
733da154c5
1. Keep up to date by merging master
...
2. Factored out the parameter string parsing for ncgen and nccopy
int libdispatch/dfilter.c + include/ncfilter.h
3. Allow a parameter string to use constant types other than
unsigned int. See docs/filters.md for details.
4. Moved the old content of include/netcdf_filter.h into include/netcdf.h
and removed include/netcdf_filter.h as no longer needed.
5. Force the test filter (bzip2) in nc_test4/filter_test to
be built using BUILT_SOURCES.
2017-10-08 15:56:45 -06:00
Dennis Heimbigner
3cc3b6a4a1
add known szip file against which to test
2017-09-04 18:37:13 -06:00
Dennis Heimbigner
dab3d0da8e
Fix CMake problem with executable naming
2017-08-30 12:06:23 -06:00
Dennis Heimbigner
d8d4ed627a
master merge
2017-08-29 18:05:46 -06:00
Dennis Heimbigner
2e1e39ca8c
Add a general szip test script
2017-08-28 18:11:24 -06:00
Dennis Heimbigner
e2b2d6cf6c
Add more comprehensive tests
2017-08-28 14:56:01 -06:00
Dennis Heimbigner
99e4250d6d
Get szip working under cmake
2017-08-27 20:38:37 -06:00
Dennis Heimbigner
9afef60648
Add tst_szip to Cmake
2017-08-27 15:51:45 -06:00
Dennis Heimbigner
ed44fd7306
Add szip support via libaec
2017-08-27 13:35:20 -06:00
Dennis Heimbigner
5085df7595
1. Add discussion of parameter encoding, esp in face of byte-order,
...
to docs/filter.md
2. Moved location of filter.md in documentation
3. Add a template file as the basis for building new filters.
4. Did some test case cleanup
2017-08-21 19:54:06 -06:00
Dennis Heimbigner
86fc8745dc
merge master and resolve conflicts
2017-08-12 15:50:31 -06:00
Dennis Heimbigner
7f31358ee2
As a result of helping a user trying to build the filter test on
...
a linux variant system, I made some changes to (one hopes)
incorporate some improvements in documenting and building this test.
2017-07-25 15:57:00 -06:00
Ward Fisher
f1f7224f93
Corrected a false positive.
2017-06-01 09:36:54 -06:00
Ward Fisher
1f96a66414
hdf4 chunking file rename
2017-06-01 09:15:41 -06:00
Ward Fisher
a077289464
Refactored hdf4 chunking test a little bit.
2017-06-01 09:11:52 -06:00
Ward Fisher
08f7d06eb6
Refactoring hdf4 chunking test in similar fashion to hdf5 compatibility test. Files are linked via AC_CONFIG_LINKS instead of shuffling things around in a shell script.
2017-06-01 09:02:31 -06:00
Ward Fisher
128fb5611a
Trying distcleanfiles experiment.
2017-06-01 08:53:31 -06:00
Ward Fisher
df872ac1bc
Continued refactoring.
2017-05-31 16:34:46 -06:00
Ward Fisher
05e2ff3881
Sorting out hdf4 chunk tests.
2017-05-31 15:09:26 -06:00
Ward Fisher
5699a32376
Updated cleanfiles list on Makefile.am
2017-05-31 15:01:02 -06:00
Ward Fisher
9823d73c44
Corrected a logic error.
2017-05-31 14:04:53 -06:00
