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554 Commits

Author SHA1 Message Date
Ward Fisher
1e0cf1136c
Merge branch 'master' into ncpyfilter.dmh 2018-03-08 15:48:40 -07:00
Ed Hartnett
4e646e03f6 fixed cmake build file 2018-03-05 05:03:46 -07:00
Ed Hartnett
17f7a76356 moved HDF4 tests 2018-03-05 03:45:18 -07:00
Ward Fisher
c359a0e96a
Merge branch 'master' into newhash1.dmh 2018-03-04 22:40:51 -07:00
Dennis Heimbigner
7b324657d4
Merge branch 'master' into ncpyfilter.dmh 2018-03-02 19:49:43 -07:00
Dennis Heimbigner
dd4e71c150 1. Solve issue raised on netcdfgroup mailing list: 
https://www.unidata.ucar.edu/mailing_lists/archives/netcdfgroup/2018/msg00020.html
See docs/filters.md for a detailed description of the solution.
Basically we add nccopy flags "-F none" and "-F <varname>:none"
to suppress output compression as desired.

2. Add tests to nc_test4/tst_filter.sh to test out the solution.
 2018-03-02 16:55:58 -07:00
Ward Fisher
faad52041f Merge branch 'ejh_valgrind_removal_unidata_again' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into pr-aggregation2.wif 2018-03-02 14:22:42 -07:00
Ed Hartnett
49ebcc0e57 fixed problem of test file 2018-02-27 11:10:04 -07:00
Ed Hartnett
64e5742d88 added tst_bug324 to cmake build 2018-02-27 08:53:58 -07:00
Ed Hartnett
45329862a8 removed valgrind stuff 2018-02-27 08:36:12 -07:00
Dennis Heimbigner
8cb1fc4cfe This is the second step in refactoring the libsrc4 code. 
The first was branch newhash0.dmh.

As with newhash0.dmh, these changes should be transparent.
 2018-02-24 20:36:24 -07:00
Ward Fisher
a8faac9292
Merge branch 'master' into classic_ext_ncid 2018-02-22 17:15:34 -07:00
Ward Fisher
8e169175e4
Merge branch 'master' into newhash0.dmh 2018-02-22 14:55:31 -07:00
Ward Fisher
f9f27c5ab7
Merge branch 'master' into newhash0.dmh 2018-02-21 14:19:43 -07:00
Ed Hartnett
9de58cad99
Merge branch 'master' into ejh_extra_tests 2018-02-19 18:52:50 -07:00
Ed Hartnett
ca5f314fc0 minor test cleanup 2018-02-16 09:00:15 -07:00
Ed Hartnett
13fcc67d90
Merge branch 'master' into ejh_hdf4_dispatch_unidata2 2018-02-15 13:25:11 -07:00
Ed Hartnett
b0a8d4ee30 fixed merge issue 2018-02-14 07:58:50 -07:00
Ed Hartnett
41eb0f26c1
Merge branch 'master' into ejh_extra_tests 2018-02-13 15:48:35 -07:00
Ed Hartnett
e5cbf259ba fixed string memory leak 2018-02-13 14:17:15 -07:00
Ed Hartnett
cb4722a0cf fix for memory problem in tst_vars2.c 2018-02-13 13:49:29 -07:00
Ward Fisher
878b107d36 Corrected overflow error in support of https://github.com/Unidata/netcdf-c/issues/861 2018-02-13 12:18:06 -07:00
Ed Hartnett
dd41680f90 added rename test 2018-02-12 10:13:31 -07:00
Ed Hartnett
dbbd5094cb added rename test to CMakeLists.txt 2018-02-12 10:12:49 -07:00
Ed Hartnett
32e2798dde added rename test 2018-02-12 10:08:59 -07:00
Ed Hartnett
70d815b6c8 pulled in some attribute testing that got missed in recent merges 2018-02-12 08:33:20 -07:00
Dennis Heimbigner
727b613459 This is the initial step in moving to the new higher performance 
(I hope) metadata mechanism. This mostly just adds new pieces of
code (e.g. nclistmap) and does some minor fixes.

It should be transparent to everything else.
The next set of changes will be the big step.
 2018-02-08 19:53:40 -07:00
Ed Hartnett
bd77f8865b fixed tst_filter.sh for parallel builds 2018-02-08 07:20:40 -07:00
Ed Hartnett
2358d4a910 moved HDF4 to its own dispatch layer 2018-02-08 06:20:58 -07:00
Ward Fisher
5107655682 Accomodate Visual Studio 2018-02-06 13:32:30 -06:00
Ward Fisher
a640c034f2 Merge branch 'ejh_atts_unidata' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into ejh_batch 2018-02-05 11:47:48 -07:00
Ward Fisher
e0577cb251 Merge branch 'ejh_fill_value_string_unidata' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into ejh_batch 2018-02-05 11:47:34 -07:00
Ward Fisher
b268f268bd Merge branch 'ejh_dims_unidata' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into ejh_batch 2018-02-05 11:43:41 -07:00
Ed Hartnett
0d96ead703
Merge branch 'master' into ejh_dims_unidata 2018-02-05 06:34:04 -07:00
Ward Fisher
c12fca453e Merge branch 'ejh_rename2_unidata' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into ejh_batch 2018-02-02 17:57:32 -07:00
Ward Fisher
9b4b2308c6 Merge branch 'ejh_warnings' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into ejh_batch 2018-02-02 17:56:04 -07:00
Ed Hartnett
383a19161a fixed warnings 2018-02-01 07:36:34 -07:00
Ed Hartnett
2afe401f17 another rename fix 2018-02-01 05:10:57 -07:00
Ward Fisher
03446423f7 Merge branch 'patch-12' of https://github.com/gsjaardema/netcdf-c into gsjaardema-batch 2018-01-31 16:24:38 -07:00
Ward Fisher
9a0d1d6501 Merge branch 'patch-14' of https://github.com/gsjaardema/netcdf-c into gsjaardema-batch 2018-01-31 16:21:41 -07:00
Ward Fisher
8c33de7a9a Merge branch 'patch-15' of https://github.com/gsjaardema/netcdf-c into gsjaardema-batch 2018-01-31 16:17:59 -07:00
Greg Sjaardema
30ec6821c3
Missing ERR after api test call 
Missed this one on previous PR.  Another missing ERR after API test if.
 2018-01-31 10:08:48 -07:00
Greg Sjaardema
60a6f34102
Fix missing ERR after if test 
A couple API invocations were missing the ERR macro following the if test.
 2018-01-31 09:17:28 -07:00
Greg Sjaardema
2f44fa49c6
Eliminate unused variables 
Remove variables no longer used after recent refactorings.
 2018-01-31 09:05:35 -07:00
Greg Sjaardema
63b700c40c
Remove V2 code if V2 API not being built 
Remove test code that uses the version 2 API if the version 2 API code is not being activated in the build.

This was originally proposed in #656 with a better fix in #755 which was removed.
 2018-01-31 09:00:17 -07:00
Ed Hartnett
7c936a7bb6 brought in changes from ejh_att 2018-01-31 08:44:33 -07:00
Ed Hartnett
dff3472a2e comment change to trigger travis testing 2018-01-31 07:22:08 -07:00
Ed Hartnett
94c23712b7 extra tests, plus fill value fixes for string type 2018-01-30 14:39:47 -07:00
Ed Hartnett
333b802861 fix dim bad paramter issues 2018-01-30 09:35:56 -07:00
Dennis Heimbigner
d388f0e7f3 - Rename target logical name bzip2 in nc_test4/hdf5plugins in order to avoid 
cmake error CMP0002: duplicate name
- Assuming that all compilers treat floating point constants as double,
  remove d suffix from DBLVAL in nc_test4 and examples/C
 2018-01-25 19:33:23 -07:00
Wei-keng Liao
cb7aafa805 fix issue 791: validate ncid for classic files 2018-01-25 00:03:19 -06:00
Ward Fisher
7f1f02c96d Additional tweaks for make dist. 2018-01-24 18:05:30 -07:00
Ward Fisher
d0339c8902 Merge branch 'pr-catchup' into v4.6.0-release-branch 2018-01-24 15:51:24 -06:00
Ward Fisher
ca814c17f0 Added fenceposts for filter testing. 2018-01-23 18:18:58 -06:00
Dennis Heimbigner
3e47f5f300 Rebuilt the filter parameter handling code to use a common 
parser everywhere.
 2018-01-23 16:00:11 -07:00
Ward Fisher
aac9fad1c4 Merge branch 'ejh_develop_3' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into pr-catchup 2018-01-23 15:32:19 -06:00
Wei-keng Liao
d0c2015ced fix tst_converts.c when enable-erange-fill is set 2018-01-20 15:44:04 -06:00
Ed Hartnett
c329298dc5 merged 760 2018-01-20 07:31:42 -07:00
Ed Hartnett
ef65bdf9af merged 786 2018-01-20 06:06:25 -07:00
Ed Hartnett
da928c1b83 merged 780 2018-01-20 06:05:34 -07:00
Ed Hartnett
9fcc6b62fd merged 769 2018-01-20 06:05:17 -07:00
Dennis Heimbigner
22ebecab23 Use an explicit can_apply function for filters 2018-01-19 18:45:56 -07:00
Dennis Heimbigner
991c4c6d16 Add some extra nccopy filter debug output 2018-01-19 12:06:02 -07:00
Dennis Heimbigner
e723d7dfed Merge branch 'plugins.dmh' of https://github.com/Unidata/netcdf-c into plugins.dmh 2018-01-19 10:58:46 -07:00
Ed Hartnett
986673ff49 attempted to fix parallel build issue 2018-01-19 06:53:04 -07:00
Ed Hartnett
2f7625d19a more test development 2018-01-19 05:19:15 -07:00
Ed Hartnett
196a0b574a more test development 2018-01-19 05:11:07 -07:00
Ed Hartnett
4be1fd82e6 further test development 2018-01-19 04:16:59 -07:00
Ed Hartnett
bc1f103c3d cleaned up h5 checks in nc4grp.c 2018-01-19 03:37:49 -07:00
Ed Hartnett
3f83998b26
Merge branch 'master' into ejh_rename2 2018-01-18 16:05:04 -07:00
Ward Fisher
0f5fc7222b
Merge branch 'master' into plugins.dmh 2018-01-18 15:46:50 -07:00
Ed Hartnett
126d34da1d more tests, error handling 2018-01-18 07:36:52 -07:00
Ed Hartnett
38c7cddf8f further test development, added documentation for uncommitted user-defined types, fixed check of return value 2018-01-18 06:47:50 -07:00
Ed Hartnett
466fac5381 more test development 2018-01-18 05:57:33 -07:00
Ed Hartnett
001483505f rehabilitated tst_types.c 2018-01-18 05:34:52 -07:00
Dennis Heimbigner
090fc98ac9 Merge branch 'plugins.dmh' of https://github.com/Unidata/netcdf-c into plugins.dmh 2018-01-17 19:48:10 -07:00
Dennis Heimbigner
8d8dff9a2a Add some temporary debugging output 2018-01-17 19:47:54 -07:00
Ward Fisher
62abc6af09 Updated CMakeLists.txt to correct an issue seen on OSX when using cmake and running 'make test' directly from nc_test4 2018-01-17 14:00:52 -07:00
Ed Hartnett
9949a11155 removed some unneeded HDF4 checks, added some needed parameter checks 2018-01-17 09:09:58 -07:00
Ward Fisher
ac5aabc3fc Tweaked for parallel autoconf tests with filters. 2018-01-16 17:49:21 -07:00
Ward Fisher
f7b4c61c69 Updated test for OSX 2018-01-16 17:07:52 -07:00
Ward Fisher
606b782adf Corrected a build issue on OSX 2018-01-16 16:39:58 -07:00
Ed Hartnett
e6f82ae397 further test development 2018-01-16 14:57:40 -07:00
Ed Hartnett
3af0e84314 test development 2018-01-16 14:38:09 -07:00
Ed Hartnett
3a0385da3e test development 2018-01-16 14:36:47 -07:00
Dennis Heimbigner
70068d7d32 With Ward's help, I figured out how to 
obviate the need for build type under
cmake+Visual-studio. This simplified
findplugin.in.
 2018-01-16 13:28:30 -07:00
Dennis Heimbigner
99fccab359 1. Keep up to date by merging master 
2. Fixed plugin building (nc_test4/hdf5plugins)
   to be done properly by cmake and automake.
4. Duplicated part of the nc_test4 filter test code
   in examples/C

An incomplete and untested set of hooks exist
for OS-X in nc_test4/findplugins.in. They need testing.
 2018-01-16 11:00:09 -07:00
Ed Hartnett
3626c776ae test development 2018-01-16 09:43:41 -07:00
Ed Hartnett
0862d6d7ce removed MPE calls 2018-01-16 09:23:36 -07:00
Ed Hartnett
d77ac20af4 more test cleanup 2018-01-16 08:14:43 -07:00
Ed Hartnett
f603ab2163 more test cleanup 2018-01-16 08:09:14 -07:00
Ed Hartnett
ba518b80a7 more test cleanup 2018-01-16 08:09:03 -07:00
Ed Hartnett
f716ac8549 more test cleanup 2018-01-16 08:06:23 -07:00
Ed Hartnett
1bd6387e5e clean up of test 2018-01-16 08:04:00 -07:00
Ed Hartnett
de150aec4e clean up of test 2018-01-16 08:03:15 -07:00
Ed Hartnett
3fa3d3f9f9 ported rename fix changes from branch ejh_fill_values for easy merging 2018-01-05 06:01:22 -07:00
Levi Naden
978e83d28a Fix another test typo 2018-01-02 11:43:15 -05:00
Levi Naden
6a24ca4366 Fix typo 2018-01-02 11:39:09 -05:00
Levi Naden
f6fc9c183b Allow multiple vars with different chunks on the same unlimited dim 
Fix #299
The conditions to make this error are the following:
* Two variables with different chunk sizes
* Both variables write on the same unlimited dimension
* The first variable has already written data when the second variable is created
 2018-01-02 11:37:01 -05:00
Ward Fisher
77cca75977
Merge branch 'master' into ejh_more_tests 2017-12-07 20:24:43 -07:00