group renaming. The primary API
is 'nc_rename_grp(int grpid, const char* name)'.
No test cases provided yet.
This also required adding a rename_grp entry
to the dispatch tables.
unlimited dimension hanging. Extending the size of an unlimited
dimension in HDF5 must be a collective operation, so now an error is
returned if trying to extend in independent access mode.
Quincey's bug fixes for parallel build portability, particularly
OpenMPI on MacOS-X.
netCDF classic or 64-bit offset files that have a UINT32_MAX flag for
large last record size of a variable that has values larger than 1
byte. This problem had previously been fixed for *writing* such data,
but was only tested with an ncbyte variable. Fixed test to
demonstrate problem and the fix.
More updates to chunking documentation, cosmetic fixes for some
"--option=" documentation that doxygen turns into mdash.
(primarily from libsrc4)
into its own dispatch library
called libsrc5.
2. Fixed part of Jira NCF-253
by removing the need for the
pnetcdf_ndims field.
For some reason, the original
code tried to cache the variable
ranks rather than computing them
as needed. Fixed by doing
an ...inq_varndims call as needed.
3. found some places where NC_MAX_DIMS
was being stack allocated and changed
to heap allocation.
Still some cases in nc_test4.
Problem was that the NC_create
code was not checking for the NC_CLASSIC_MODEL
mode flag in deciding what dispatch table to use.
This meant that it was then defaulting to use
the default format, and if that was changed
to e.g. NC_FORMAT_NETCDF4, then it would try
to create a netcdf-4 format file, even is
NC_CLASSIC_MODEL mode flag was set.
for JIRA issue NCF-241.
This is only temporary
until I can make pnetcdf
operate as a separate dispatch table.
Also, fix nc_test4/tst_pnetcdf
to open with nc_open_par;
this is necessary because a pnetcdf
created file cannot be opened
as a netcdf classic file.
to indicate that they only work for atomic types,
not user defined types.
2. modified NCDEFAULT_{get/put}_vars to no longer use
nc_get/put_varm. They now directly use nc_get/put_vara
directly. This means that nc_get/put_vars now work
properly for user defined types as well as atomic types.
3. Added test cases for get_vars/put_vars with a
user defined type. Tests placed into
nc_test/tst_compounds.c
read 4 bytes from a 3 byte file, Windows would fail with an
error 22, "Invalid Operation". This would happen when trying to
read the 4-byte magic number from a very small file.
This problem was uncovered by nc_test/tst_misc.c.
When fread returns 0 and errno is 22, NC_ENOTNC is returned.
CMake related changes in CMakeLists.txt files,
cmake_config.h.in. Other changes relate to
Windows-specific issues, and changes made
when regenerating generated source files.
o Changed variable names 'typeid' to 'typeid1' to avoid a namespace conflict
in visual studio.
o Cleaned up a handful of warnings in Visual Studio.
o Addressed a few Coverity-discovered issuesl
o Made changes to CMake-based builds.
