re: https://github.com/Unidata/netcdf-c/issues/1642
Modify ncdump, nccopy, and ncgen to support the NC_COMPACT storage option.
Added test cases and added description to the man pages for the utilities.
1. ncdump: For compact storage variable, print special attribute __Storage_ as
````
<var>: _Storage = "compact";
````
2. ncgen: parse and implement
````
<var>: _Storage = "compact";
````
in a .cdl file
3. nccopy: Extend the chunk specification (-c flag) to support
compact using the forms
````
nccopy ... -c <var>:compact
and
nccopy ... -c <var>:contiguous
````
Misc. other changes
1. cleanup the copy_chunking function in ncdump/nccopy.c
re: https://github.com/Unidata/netcdf-c/issues/1584
Support has been added for multiple filters per variable. This
affects a number of components in netcdf. The new APIs are
documented in NUG/filters.md.
The primary changes are:
* A set of new functions are provided (see __include/netcdf_filter.h__).
- Obtain a list of the filters associated with a variable
- Obtain the parameters for a specific filter.
* The existing __nc_inq_var_filter__ function now returns info
about the first defined filter.
* The utilities (ncgen, ncdump, and nccopy) now support
an extended format for specifying a sequence of filters.
The general form is __<filter>|<filter>..._.
* The ncdump **_Filter** attribute now dumps a list of all the
filters associated with a variable using the above new format.
* Filter specifications can now use a filter name instead of number
for filters known to the netcdf library, which in turn is taken
from the HDF5 filter registration page.
* New errors are defined: NC_EFILTER and NC_ENOFILTER. The latter
is returned if an attempt is made to access an unknown filter.
* Internally, the dispatch table has been extended to add a function
to handle all of the filter functions.
* New, filter-related, tests were added to nc_test4.
* A new plugin was added to the plugins directory to help with testing.
Notes:
1. The shuffle and fletcher32 filters are not part of the multifilter system.
Misc. changes:
1. A debug module was added to libhdf5 to help catch error locations.
Some versions of some servers are returning malformed responses.
Make the library either handle them or gracefully fail.
The three server errors "fixed" here are as follows.
1. The attribute _NCProperties sometimes has a trailing nul character
in its value. Soln is to elide the nul(s).
2. Sometimes a DAP response has no data part, only a DMR.
Soln is to detect and return an error code instead of crashing.
3. Sometimes a server returns a redirection, but our current
openmagic() function was not following the redirect. Soln
is to follow redirects.
Also because of #2, I am temporarily making --disable-dap-remote-tests
be the default.
