Commit Graph

6352 Commits

Author SHA1 Message Date
Ward Fisher
bbe19501d1
Merge pull request #1314 from simonholgate/fix_tst_cdf5format_for_loop
Added int i and j declarations
2019-02-12 09:41:05 -07:00
Simon Holgate
6834f4155c Added int i and j declarations 2019-02-12 15:10:39 +00:00
Ed Hartnett
909402ccd6
Merge branch 'master' into ejh_more_rename_woes_3 2019-02-12 05:49:04 -07:00
Ed Hartnett
1c22629201
Merge branch 'master' into ejh_more_rename_woes_2 2019-02-12 05:48:45 -07:00
Ward Fisher
56f94893ec
Merge pull request #1302 from Unidata/bigend.dmh
Fix errors when building on big-endian machine
2019-02-11 16:38:55 -07:00
Dennis Heimbigner
5f0fdd7e5d Update Makefile.am to use ref_ filter files 2019-02-11 16:07:03 -07:00
Ward Fisher
adf4a48a29 Corrected a doxygen warning in the DAP4 documentation. 2019-02-11 13:29:40 -07:00
Ward Fisher
40f2f5e949 Updated link to reflect newer netCDF-Fortran documentation location. 2019-02-11 13:28:34 -07:00
Ward Fisher
70bd755548 Fixed typo. 2019-02-11 13:06:41 -07:00
Ward Fisher
ebf507233c Updated link to new fortran documentation. 2019-02-11 13:03:07 -07:00
Dennis Heimbigner
8d59f4ebb8 Add missing updates from bigend.tmp 2019-02-10 14:00:40 -07:00
Dennis Heimbigner
e932655888 Renamed the baseline files for tst_filter.sh 2019-02-09 15:14:13 -07:00
Dennis Heimbigner
4cd440dd96 URL with username+pwd in url is not working.
re: esupport (DVK-211460)

Turns out it was a typo in libdispatch/dauth.c
Fix is to Change:
HTTP.USERNAME -> HTTP.CREDENTIALS.USERNAME
and
HTTP.PASSWORD-> HTTP.CREDENTIALS.PASSWORD
2019-02-09 15:06:03 -07:00
Dennis Heimbigner
a6b04c0c66 Extend nccopy -F option syntax.
A user suggested that the nccopy -F option
syntax should be extended to support specification
of multiple (or all) variables in a single -F option.

The new syntax allows:

1. '*' as the name of the variable; this means apply the
   filter to all variables in the data set.
2. *var1|var2|...* as the variable name to indicate that the filter
   should be applied to the multiple specified variables.
2019-02-08 18:48:17 -07:00
Ward Fisher
4c6d56abc0
Merge branch 'master' into ejh_more_rename_woes_3 2019-02-07 14:28:46 -07:00
Ward Fisher
1d56285145
Merge branch 'master' into ejh_more_rename_woes_2 2019-02-07 14:28:43 -07:00
Ward Fisher
3a14251dd9
Merge branch 'master' into bigend.dmh 2019-02-07 14:28:39 -07:00
Ward Fisher
a260bbbf76
Merge pull request #1309 from Unidata/pr-aggregation.wif
Rinse and Repeat: PR Edition
2019-02-07 14:27:17 -07:00
Ward Fisher
6511599a6d Corrected issue in support of https://github.com/Unidata/netcdf-c/issues/1310 2019-02-07 12:43:07 -07:00
Ward Fisher
035b3030ef Merge branch 'ejh_rename_var_to_non_coord_var' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into pr-aggregation.wif 2019-02-06 14:09:48 -07:00
Ward Fisher
ecc11ed29d Merge remote-tracking branch 'origin/gh1295.wif' into pr-aggregation.wif 2019-02-06 14:09:00 -07:00
Ward Fisher
9aae0351ac Merge branch 'ejh_rename_bug' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into pr-aggregation.wif 2019-02-06 14:08:41 -07:00
Ward Fisher
2c335466bd Merge branch 'ejh_not_read_rename_2' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into pr-aggregation.wif 2019-02-06 14:08:06 -07:00
Ward Fisher
67086ccd66 Merge branch 'fix-warnings' of https://github.com/mathstuf/netcdf-c into pr-aggregation.wif 2019-02-06 14:07:29 -07:00
Ward Fisher
5fca0edf73 Move away from deprecated PackageManager to the productbuild generator. 2019-02-05 13:08:30 -07:00
Ward Fisher
455bf13529 Some housekeeping. Next big push may be to clean up older files. 2019-02-05 12:57:27 -07:00
Ed Hartnett
70201adb51 comment cleanup 2019-02-03 07:43:56 -07:00
Ed Hartnett
5d908a0bbb now preserve order of varids after a var rename 2019-02-03 06:56:03 -07:00
Ed Hartnett
8e6f38b099 detecting conditions for mandatory rename of vars with varid > renamed var 2019-02-03 06:35:29 -07:00
Ed Hartnett
275e116f49 added test to demonstrate out of order varids after rename 2019-02-03 06:28:04 -07:00
Ed Hartnett
cb47eaf895 uncommented some testing 2019-02-02 07:43:56 -07:00
Ed Hartnett
e30a2bf208 added come comments 2019-02-02 07:32:31 -07:00
Ed Hartnett
8acde75e3c converted hdf5gtp.c to use H5Lmove instead of deprecated H5Gmove 2019-02-02 07:24:02 -07:00
Ed Hartnett
f25f050be8 converted hdf5var to use H5Lmove instead of deprecated H5Gmove 2019-02-02 07:20:14 -07:00
Ed Hartnett
aed2a4c1db got tst_h_rename using H5Lmove 2019-02-02 07:17:57 -07:00
Ed Hartnett
373c0b5665 added tst_h_rename.c to check HDF5 renaming behavior 2019-02-02 06:17:43 -07:00
Ed Hartnett
6728fceab6 uncommented a bunch of rename tests 2019-02-02 05:55:18 -07:00
Ed Hartnett
1dd76c996e added tst_rename3.c for more rename testing 2019-02-02 05:53:45 -07:00
Ed Hartnett
c8cbff4728 added test (commented out) in tst_rename2.c which fails 2019-02-02 04:00:34 -07:00
Dennis Heimbigner
8714066b18 Fix errors when building on big-endian machine
re: issue https://github.com/Unidata/netcdf-c/issues/1278
re: issue https://github.com/Unidata/netcdf-c/issues/876
re: issue https://github.com/Unidata/netcdf-c/issues/806

* Major change to the handling of 8-byte parameters for nc_def_var_filter.
  The old code was not well thought out.
  * The new algorithm is documented in docs/filters.md.
  * Added new utility file plugins/H5Zutil.c to support
  * Modified plugins/H5Zmisc.c to use new algorithm
  the new algorithm.
  * Renamed include/ncfilter.h to include/netcdf_filter.h
    and made it an installed header so clients can access the
    new algorithm utility.
  * Fixed nc_test4/tst_filterparser.c and nc_test4/test_filter_misc.c
    to use the new algorithm
* libdap4/ fixes:
  * d4swap.c has an error in the endian pre-processing such
    that record counts were not being swapped correctly.
  * d4data.c had an error in that checksums were being computed
    after endian swapping rather than before.
* ocinitialize() was never being called, so xxdr bigendian handling
  was never set correctly.
  * Required adding debug statements to occompile
* Found and fixed memory leak in ncdump.c

Not tested:
* HDF4
* Pnetcdf
* parallel HDF5
2019-01-31 21:13:06 -07:00
Ward Fisher
9ca942b201
Merge branch 'master' into fix-warnings 2019-01-31 12:39:06 -07:00
Ed Hartnett
9cde4f0185
Merge branch 'master' into ejh_rename_bug 2019-01-30 12:17:37 -07:00
Ed Hartnett
f0ec05c434
Merge branch 'master' into ejh_not_read_rename_2 2019-01-30 12:17:17 -07:00
Ward Fisher
299b215862
Merge branch 'master' into ejh_rename_var_to_non_coord_var 2019-01-30 11:08:58 -07:00
Ward Fisher
79e8089b54
Merge branch 'master' into gh1295.wif 2019-01-30 11:08:47 -07:00
Ward Fisher
69c4ed60c0
Merge pull request #1301 from Unidata/zerodim.dmh
When doing prefetch in DAP2, ignore invisible variables.
2019-01-30 11:08:26 -07:00
Ward Fisher
12724837b0 Fixed a typo. 2019-01-30 10:34:51 -07:00
Ward Fisher
df5a146432 Added test in support of https://github.com/Unidata/netcdf-c/issues/1300 and https://github.com/Unidata/netcdf-c/issues/1301 2019-01-29 15:23:03 -07:00
Dennis Heimbigner
54656b4a16 When doing prefetch in DAP2, ignore invisible variables.
re: Issue https://github.com/Unidata/netcdf-c/issues/1300

Add a check for invisible variables.
2019-01-29 13:43:02 -07:00
Ed Hartnett
fcae21bb9e more testing 2019-01-27 11:48:28 -07:00