Commit Graph

34 Commits

Author SHA1 Message Date
Dennis Heimbigner
8072d1f6bb Modify DAP2 and DAP4 to optionally allow Fillvalue/Variable mismatch
re: issue https://github.com/Unidata/netcdf-c/issues/1151

Modify DAP2 and DAP4 code to handle case when _FillValue type is not
same as the parent variable type.

Specifically:
1. Define a parameter [fillmismatch] to allow this mismatch;
   default is to disallow.
2. If allowed, forcibly change the type of the _FillValue to match
   the parent variable.
3. If allowed Convert the values to match new type
4. Generate a log message
5. if not allowed, then fail

Implementing this required some changes to ncdap_test/dapcvt.c
Also added test cases.

Minor Unrelated Changes:
1. There were a number of warnings about e.g.
   assigning a const char* to a char*. Fix these
2. In nccopy.1, replace .NP with .IP "n"
   (re PR https://github.com/Unidata/netcdf-c/pull/1144)
3. fix minor error in ncdump/ocprint
2018-10-01 15:51:43 -06:00
Dennis Heimbigner
d62a9e623c Fix the NC_INMEMORY code to work in all cases with HDF5 1.10.
re: github issue https://github.com/Unidata/netcdf-c/issues/1111

One of the less common use cases for the in-memory feature is
apparently failing with HDF5-1.10.x.  The fix is complicated and
requires significant changes to libhdf5/nc4memcb.c. The current
setup is detailed in the file docs/inmeminternal.dox.

Additionally, it was discovered that the program
nc_test/tst_inmemory.c, which is invoked by
nc_test/run_inmemory.sh, actually was failing because of the
above problem. But the failure is not detected since the script
does not return non-zero value.

Other Changes:
1. Fix nc_test_tst_inmemory to return errors correctly.
2. Make ncdap_tests/findtestserver.c and dap4_tests/findtestserver4.c
   be generated from ncdap_test/findtestserver.c.in.
3. Make LOG() print output to stderr instead of stdout to
   avoid contaminating e.g. ncdump output.
4. Modify the handling of NC_INMEMORY and NC_DISKLESS flags
   to properly handle that NC_DISKLESS => NC_INMEMORY. This
   affects a number of code pieces, especially memio.c.
2018-09-04 11:27:47 -06:00
Dennis Heimbigner
05d078a8b0 The ncdap_tests were a mess, so I decided to clean them up
to remove cruft and to remove unused site tests
and make the tests somewhat more understandable.

Also did a fix to libdispatch/dwinpath to convert
relative paths to absolute paths. This will, I hope,
take care of some windows path problems when using
$srcdir in shell scripts.
2018-03-20 21:31:31 -06:00
Dennis Heimbigner
081963ef8a forgot to add to cmake 2017-07-14 16:44:50 -06:00
Dennis Heimbigner
3db4f013bf Primary change: add dap4 support
Specific changes:
1. Add dap4 code: libdap4 and dap4_test.
   Note that until the d4ts server problem is solved, dap4 is turned off.
2. Modify various files to support dap4 flags:
	configure.ac, Makefile.am, CMakeLists.txt, etc.
3. Add nc_test/test_common.sh. This centralizes
   the handling of the locations of various
   things in the build tree: e.g. where is
   ncgen.exe located. See nc_test/test_common.sh
   for details.
4. Modify .sh files to use test_common.sh
5. Obsolete separate oc2 by moving it to be part of
   netcdf-c. This means replacing code with netcdf-c
   equivalents.
5. Add --with-testserver to configure.ac to allow
   override of the servers to be used for --enable-dap-remote-tests.
6. There were multiple versions of nctypealignment code. Try to
   centralize in libdispatch/doffset.c and include/ncoffsets.h
7. Add a unit test for the ncuri code because of its complexity.
8. Move the findserver code out of libdispatch and into
   a separate, self contained program in ncdap_test and dap4_test.
9. Move the dispatch header files (nc{3,4}dispatch.h) to
   .../include because they are now shared by modules.
10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts.
11. Make use of MREMAP if available
12. Misc. minor changes e.g.
	- #include <config.h> -> #include "config.h"
	- Add some no-install headers to /include
	- extern -> EXTERNL and vice versa as needed
	- misc header cleanup
	- clean up checking for misc. unix vs microsoft functions
13. Change copyright decls in some files to point to LICENSE file.
14. Add notes to RELEASENOTES.md
2017-03-08 17:01:10 -07:00
Dennis Heimbigner
ee2916f60a Originally, libdap2 was also going to provide
a dap2->netcdf-4 translation. That is now
superceded by dap4. But there is some cruft
in the dap2 code around this that should be removed.
2017-02-21 15:13:37 -07:00
Ward Fisher
b477a9c1b3 Corrected a typo resulting in a cmake warning. 2016-09-06 12:41:48 -06:00
Ward Fisher
486f69522c Merged utility-based tests fix into cmake-based builds. 2016-08-31 15:48:10 -06:00
dmh
dbc7215063 1. fix nc_open_mem doxygen description
2. fix some bugs wrt to cygwin vs linux.
3. add to RELEASE_NOTES
4. try to fix tst_inmemory fd error by putting the first
   arg to dotest in quotes.
2015-05-28 19:23:33 -06:00
Ward Fisher
281c30bed0 disabled a remote test that is currently hanging. 2015-05-15 16:08:48 -06:00
Ward Fisher
d06e15579f Moved test for [NCF-330] out of 'known-failing' fenceposts and into the regular test rotation. Also added it to the autotools-based tests. 2015-05-08 14:02:12 -06:00
Ward Fisher
5cc6e915f1 Added test for issue found in [NCF-330]. 2015-05-08 14:02:11 -06:00
Ward Fisher
2d72b7ca7f More work on getting the shell scripts working properly with cmake under MSYS. 2015-02-02 14:46:50 -07:00
dmh
d2a832163b Make cmake run testauth.sh 2014-12-31 22:53:03 -07:00
dmh
20720199c8 1. synch with oc
2. fix ocuri parameter handling
3. add ncdap_test/testuri.sh to test parameter handling.
2014-12-27 20:42:01 -07:00
Ward Fisher
7f812b367e Manual merge of pull request https://github.com/Unidata/netcdf-c/pull/64 contributed by nschloe. Assorted CMake improvements. 2014-06-11 15:51:31 -06:00
Ward Fisher
e968429a0c Cleaned up CMake configuration file a little bit. 2014-04-22 14:51:57 -06:00
Ward Fisher
44fae42214 Cleaned up indentation, white space in multiple CMakeLists.txt files. 2014-04-21 11:15:33 -06:00
Ward Fisher
1480ae77a9 Added test_varm3 back in to the list of active tests, to keep it in step with autotools.
Corrected configure.ac; CURLOPT_RESPONSE_CODE should have been CURLINFO_RESPONSE_CODE.
2014-03-13 10:06:12 -06:00
dmh
a189b98b0b 1. Any test that references nctestserver/NC_findtestserver
should be under ENABLE_DAP_REMOTE_TESTS.
   Fixed to make sure that this is so.
   Also attempted to fix ncdap_test/CMakeLists.txt,
   but probably got it wrong.
   HT to Nico Schlomer.
2. Attempted to reduce the number of conversion errors
   when -Wconversion is set. Fixed oc2, but
   rest of netcdf remains to be done.
   HT to Nico Schlomer.
3. When doing #2, I discovered an error in ncgen.y
   that has remained hidden. This required some other
   test case fixes.
2014-03-08 20:41:30 -07:00
Ward Fisher
c72ac7219e Added ENABLE_DAP_AUTH_TESTS flag to CMakelists files. 2014-03-07 13:58:09 -07:00
dmh
e3545bf88d 1. Allow files to be opened by name multiple
times, but returning the same ncid.
2. Separate out the dap auth tests
   and make them disabled by default.
3. turn of ncdap_test/test_varm3 until
   we can find a copy of coads_climatology.nc
2014-03-07 12:04:38 -07:00
Ward Fisher
16400df5e0 Resolved Conflict when cherry-picking patches. 2014-02-06 11:33:31 -07:00
Ward Fisher
9b0a98383a Added CMakeLists.txt to missing Makefile.am files, so that CMake-based builds can be used on source packages generated by make dist 2014-02-06 11:32:32 -07:00
dmh
dfc3749506 [NCF-282]/ HAD-595112
The code that tests if a path is a url is
faulting when the url does not end in a slash
(e.g. http://thredds-tests.ucar.edu).
The code that tests if a path is a url is
faulting when the url does not end in a slash
(e.g. http://thredds-tests.ucar.edu).
CF-273]/HZY-708311

Solution was to do a null pointer test.
Added a test (tst_misc).
2014-01-20 16:11:45 -07:00
Ward Fisher
0032af978b Added INQ_FORMAT_EXTENDED-related tests to the cmake build system (based on inclusion in autotools-based builds). 2014-01-16 13:14:49 -07:00
dmh
c9bb8c0abf Add http auth test to cmake 2013-11-15 13:44:27 -07:00
Ward Fisher
33d3d06971 Added initial 'make dist', 'make distcheck' support to
CMake-based builds.
2013-06-03 16:42:04 +00:00
Ward Fisher
67f96188ff Merged latest from netCDF-cmake branch in preparation for 4.3.0 release. 2013-04-23 21:50:07 +00:00
Ward Fisher
7a226dd3f1 Merging the win_netcdf branch into the trunk. 2012-09-27 22:50:41 +00:00
Ward Fisher
34efd517f9 2012-09-21 17:37:57 +00:00
Ward Fisher
31cfdd5910 Added 'examples' directory to CMake 2012-08-28 22:31:07 +00:00
Ward Fisher
0b702c3ce2 Modified tests to determine location dynamically instead of from an environmental variable. 2012-08-21 22:52:40 +00:00
Ward Fisher
58035ff8f2 Added new tests, CMake functionality. 2012-08-21 20:08:53 +00:00