Commit Graph

1477 Commits

Author SHA1 Message Date
Ward Fisher
84a5b214d9 2013-06-26 22:16:09 +00:00
Dennis Heimbigner
9979a2fa60 Synch with oc2.0 2013-06-26 21:46:54 +00:00
Ward Fisher
2ce8f6b5c9 Merged latest from trunk, plus a minor
fix while waiting on Dennis's fix.
2013-06-26 21:09:24 +00:00
Dennis Heimbigner
628aed80d9 1. synch changes with oc2.0
2. Fix a bug in ncgen to
   catch a special case of a malformed
   datalist.
2013-06-26 18:55:30 +00:00
Ward Fisher
9d75232166 Merged latest from trunk. 2013-06-25 17:21:13 +00:00
Russ Rew
f44f553274 Oops, last commit should have had this commit message:
Greg Sjaardema's contributed optimization for the nc4_find_dim_len
function in libsrc4/nc4internal.c. The patch eliminates several
malloc/free calls that exist in the original coding.
2013-06-25 17:07:55 +00:00
Russ Rew
58a63708cc Fix contributed by Nath Gopalaswamy to large file problem reading
netCDF classic or 64-bit offset files that have a UINT32_MAX flag for
large last record size of a variable that has values larger than 1
byte.  This problem had previously been fixed for *writing* such data,
but was only tested with an ncbyte variable.  Fixed test to
demonstrate problem and the fix.

More updates to chunking documentation, cosmetic fixes for some
"--option=" documentation that doxygen turns into mdash.
2013-06-25 17:04:10 +00:00
Ward Fisher
40382e8dde Merged latest changes from netcdf-cmake branch. 2013-06-20 20:38:23 +00:00
Ward Fisher
5bebcf13f7 Merged latest from trunk. 2013-06-18 20:22:34 +00:00
Ward Fisher
1b6ceaa8db Modified nc-config.in.cmake to generate an nc-config that uses syntax
in line with the nc-config generated by autotools.
2013-06-17 17:27:05 +00:00
Ward Fisher
588e543840 Merging latest from trunk. 2013-06-10 21:51:37 +00:00
Ward Fisher
b4e198d163 Added '--enable-dynamic-loading' to autotools-based builds, and
-DENABLE_DYNAMIC_LOADING to cmake-based builds.

This will allow for compatibility with hdf5 1.8.11 builds that
have enabled dynamic building (depends on libdl).

See Jira ticket NCF-258
2013-06-10 21:48:11 +00:00
Ward Fisher
4ffd3054b5 2013-06-10 17:08:56 +00:00
Ward Fisher
38ac26a74b 2013-06-10 16:01:04 +00:00
Ward Fisher
715e6e2acb 2013-06-07 21:46:56 +00:00
Ward Fisher
3c7895add1 Updated CMake-related documentation in generated websites with more detail. 2013-06-04 17:33:21 +00:00
Ward Fisher
e41bf774af 2013-06-04 17:12:08 +00:00
Ward Fisher
85e527550e Merged latest from Trunk. 2013-06-03 21:28:32 +00:00
Ward Fisher
33d3d06971 Added initial 'make dist', 'make distcheck' support to
CMake-based builds.
2013-06-03 16:42:04 +00:00
Ward Fisher
181aaf28c1 Added initial 'make dist', 'make distcheck' support. 2013-05-31 22:18:42 +00:00
Russ Rew
946a7ab8b5 Fix contributed by Nath Gopalaswamy to large file problem reading
netCDF classic or 64-bit offset files that have a UINT32_MAX flag for
large last record size of a variable that has values larger than 1
byte.  This problem had previously been fixed for *writing* such data,
but was only tested with an ncbyte variable.  Fixed test to
demonstrate problem and the fix.

More updates to chunking documentation, cosmetic fixes for some
"--option=" documentation that doxygen turns into mdash.
2013-05-31 20:18:18 +00:00
Ward Fisher
760ea650f0 Initial 'make dist' support, accomplished by leveraging
FindMakeDist.cmake (credit given in that file).

This CMake module provides make dist, make distcheck
support.
2013-05-29 20:08:23 +00:00
Ward Fisher
d4e6e04d29 Merged latest from trunk. 2013-05-28 16:25:47 +00:00
Russ Rew
3152893da0 Updated documentation on default chunk size for unlimited dimensions.
Removed old heuristic for dims several orders of magnitude smaller
than the max dimension.
2013-05-28 15:34:55 +00:00
Ward Fisher
da16fc1cde Fixed an issue with Windows builds
not compiling due to how
ssize_t was being detected/defined.
2013-05-24 21:19:07 +00:00
Ward Fisher
294dc435e8 2013-05-24 19:25:10 +00:00
Ward Fisher
7fbeed5337 2013-05-24 18:48:11 +00:00
Ward Fisher
fcd7a76936 2013-05-24 18:28:11 +00:00
Ward Fisher
8d04f686a9 2013-05-24 16:31:49 +00:00
Ward Fisher
1df00fa579 Re-added fix for very small files. 2013-05-22 18:56:52 +00:00
Ward Fisher
3455f578c2 Re-integrate changes from revision 3202 overwritten by Dennis's changes. 2013-05-22 17:23:53 +00:00
Ward Fisher
a4695c6b46 Merging latest from trunk. There are a substantial
number of changes.
2013-05-22 16:59:41 +00:00
Ward Fisher
2c63696151 Modified config.h template used by cmake to properly
check for existance of ssize_t.
2013-05-22 16:30:54 +00:00
Ward Fisher
5132dadc09 2013-05-18 13:32:49 +00:00
Russ Rew
2cd6e5f7aa Update building parallel doc to show what worked here 2013-05-17 20:34:36 +00:00
Dennis Heimbigner
228e8439d2 1. The code to parse a constraint
was losing the initial double quote
for a quoted string.
2. The code in ncuri.c was not properly
   handling occurrences of e.g. %xx
2013-05-16 21:37:58 +00:00
Dennis Heimbigner
ce290d3459 Fix Jirs 255
The DAP code compiles constraints into an internal
tree form. When it goes to fetch data, it converts
that tree form into a string suitable for use in a url.
The tree->string code was using '<' when it should be
using '<=' and vice versa.
The fix is to make sure the right operator is used.
2013-05-16 18:22:17 +00:00
Dennis Heimbigner
254c0e7c96 Historically
ncgen3 and ncgen
have treated 
uppercase atomic types
the same as lower case.
Change so upper case are no
longer allowed.

Also, synch oc.
2013-05-15 17:37:04 +00:00
Dennis Heimbigner
253a26cb82 change format of url parameters in fragment part 2013-05-13 19:12:37 +00:00
Dennis Heimbigner
63141b80d5 updated the dap description in guide.doc 2013-05-13 18:22:14 +00:00
Dennis Heimbigner
f14c884918 1. Moved all the PNETCDF code
(primarily from libsrc4)
   into its own dispatch library
   called libsrc5.

2. Fixed part of Jira NCF-253
   by removing the need for the
   pnetcdf_ndims field.
   For some reason, the original
   code tried to cache the variable
   ranks rather than computing them
   as needed. Fixed by doing
   an ...inq_varndims call as needed.

3. found some places where NC_MAX_DIMS
   was being stack allocated and changed
   to heap allocation.
   Still some cases in nc_test4.
2013-05-11 21:01:18 +00:00
Dennis Heimbigner
7407566608 2013-05-11 20:46:54 +00:00
Dennis Heimbigner
0df0766ab8 2013-05-11 20:46:28 +00:00
Dennis Heimbigner
111e20d09c cleanup 2013-05-11 20:32:39 +00:00
Dennis Heimbigner
5be772b6c0 1. Moved all the PNETCDF code
(primarily from libsrc4)
   into its own dispatch library
   called libsrc5.

2. Fixed part of Jira NCF-253
   by removing the need for the
   pnetcdf_ndims field.
   For some reason, the original
   code tried to cache the variable
   ranks rather than computing them
   as needed. Fixed by doing
   an ...inq_varndims call as needed.

3. found some places where NC_MAX_DIMS
   was being stack allocated and changed
   to heap allocation.
   Still some cases in nc_test4.
2013-05-11 20:04:33 +00:00
Dennis Heimbigner
de34ed2d5b merge from netcdf/trunk prior to merge back to trunk 2013-05-11 19:37:38 +00:00
Dennis Heimbigner
3b0fb5bd82 Synch oc2 with baseline oc2.0 2013-05-11 19:36:31 +00:00
Dennis Heimbigner
79215c77ae Allow dapodom.[ch] to be used in tests 2013-05-11 19:34:54 +00:00
Ward Fisher
5ebc2a38ee Corrected a type in the Building with Cmake help file. 2013-05-10 22:55:54 +00:00
Dennis Heimbigner
cc7cd9a142 Fix part of JIRA NCF-253.
libdispatch/dv2i.c
now heap allocates rs[NC_MAX_VARS]
instead of stack allocation.
2013-05-10 18:15:11 +00:00