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7a4479be6b
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81 Commits

Author SHA1 Message Date
Quincey Koziol
7a4479be6b Minor cleanups to reduce warnings in headers, and switch from MPI_BYTE to MPI_INT 
for MPI_Allreduce() call.
 2013-09-14 13:19:58 -05:00
Ward Fisher
71e8ed54cd Addressed Coverity issue 711904, 'Insecure temporary file'. 2013-08-14 11:21:18 -06:00
Ward Fisher
f51f97546b Addressed Coverity issue 752015, resource leak. 2013-08-14 09:51:10 -06:00
Ward Fisher
f43bf8f1da Addressed a handful of issues identified by 
Coverity static analysis.
 2013-08-05 20:36:33 +00:00
Dennis Heimbigner
beba09e70b 1. The duplicate name checking in oc2 was 
effectively o(n cubed); modified to be
   o(n squared).
2. If the list of prefetched variables is too long,
   (something on the order of 400 variables), then
   the server may reject it. Modified code so that
   in the case that the set of prefetch'd vars is
   the in fact all variables, it does not create a long
   request. This does not actually solve the problem
   if the prefetch list is long, but not all inclusive.
 2013-07-27 20:54:50 +00:00
Dennis Heimbigner
fcecd1a2bc 1. The duplicate name checking in oc2 was 
effectively o(n cubed); modified to be
   o(n squared).
2. If the list of prefetched variables is too long,
   (something on the order of 400 variables), then
   the server may reject it. Modified code so that
   in the case that the set of prefetch'd vars is
   the in fact all variables, it does not create a long
   request. This does not actually solve the problem
   if the prefetch list is long, but not all inclusive.
 2013-07-27 20:20:13 +00:00
Dennis Heimbigner
9979a2fa60 Synch with oc2.0 2013-06-26 21:46:54 +00:00
Dennis Heimbigner
628aed80d9 1. synch changes with oc2.0 
2. Fix a bug in ncgen to
   catch a special case of a malformed
   datalist.
 2013-06-26 18:55:30 +00:00
Ward Fisher
33d3d06971 Added initial 'make dist', 'make distcheck' support to 
CMake-based builds.
 2013-06-03 16:42:04 +00:00
Ward Fisher
da16fc1cde Fixed an issue with Windows builds 
not compiling due to how
ssize_t was being detected/defined.
 2013-05-24 21:19:07 +00:00
Dennis Heimbigner
228e8439d2 1. The code to parse a constraint 
was losing the initial double quote
for a quoted string.
2. The code in ncuri.c was not properly
   handling occurrences of e.g. %xx
 2013-05-16 21:37:58 +00:00
Dennis Heimbigner
254c0e7c96 Historically 
ncgen3 and ncgen
have treated 
uppercase atomic types
the same as lower case.
Change so upper case are no
longer allowed.

Also, synch oc.
 2013-05-15 17:37:04 +00:00
Dennis Heimbigner
de34ed2d5b merge from netcdf/trunk prior to merge back to trunk 2013-05-11 19:37:38 +00:00
Dennis Heimbigner
3b0fb5bd82 Synch oc2 with baseline oc2.0 2013-05-11 19:36:31 +00:00
Dennis Heimbigner
c583f91992 merge with trunk and fix conflicts 2013-05-10 17:04:28 +00:00
Ward Fisher
10807379c3 Merging from CMake branch in preparation for 4.3.0 release. 2013-04-29 20:15:57 +00:00
Ward Fisher
67f96188ff Merged latest from netCDF-cmake branch in preparation for 4.3.0 release. 2013-04-23 21:50:07 +00:00
Ward Fisher
b113f6f8b6 Merged a handful of changes from netcdf-cmake branch. 
Addressed the following coverity issues:

711762
711763
711766
711788
711933
711934
711935
 2013-04-16 23:02:54 +00:00
Ward Fisher
405f8bf827 2013-04-01 23:05:45 +00:00
Ward Fisher
9f187a1484 Merged the fix for NCF-29 from Quincy into the trunk. 2013-03-26 18:57:26 +00:00
Dennis Heimbigner
c659633d2e merge from trunk 2013-03-26 16:45:02 +00:00
Dennis Heimbigner
4e41843740 1) fix some minor bugs when pnetcdf is enabled 2)Comment out some apparently unused procedures 2013-03-25 17:12:50 +00:00
Dennis Heimbigner
9b4db7a039 Make some things static that do not need to be externally visible 2013-03-24 17:33:17 +00:00
Ward Fisher
f26a4a559a Merged latest from netcdf-cmake branch. 
Addressed several cmake-related issues, in terms of
building on Windows.  Also added XGetopt.c to 
EXTRA_dist in Makefile.am files.
 2013-03-19 22:40:15 +00:00
Dennis Heimbigner
665c2c33b2 synchronize oc2 with oc2.0 2013-03-15 21:44:59 +00:00
Dennis Heimbigner
dea3c726c8 merge trunk into this branch 2013-03-15 20:31:07 +00:00
Ward Fisher
ceb736c4b5 Corrected bug introduced via typo. Bug identified 
by Coverity. Thanks, Coverity!
 2013-03-14 23:23:36 +00:00
Ward Fisher
6096f6b43b Merged changes from CMake branch. 
Addressed a handful of memory leaks
reported by Coverity.
 2013-03-14 22:49:21 +00:00
Dennis Heimbigner
c18c90b012 removed some unused local variables 2013-03-12 20:45:58 +00:00
Dennis Heimbigner
6cf31dcf2d jira: NCF-232: bad conversion of grids 2013-02-26 04:31:06 +00:00
Ward Fisher
ddf3c31bb0 Corrected a handful of syntax issues in CMake config files, 
probably introduced more.  

Added CMake-related files to Makefile.am files for inclusion
when creating a distribution package.
 2013-02-20 23:28:28 +00:00
Ward Fisher
12b7ac7048 o Improved package_source support in CMake-based builds. 
o Corrected an issue related to uninitialized variables
which caused test failures on 2 test systems under
very specific circumstances.
 2013-02-19 23:29:41 +00:00
Dennis Heimbigner
70186d5329 Fix bug in dataError when no error message is found 2013-02-11 23:32:46 +00:00
Dennis Heimbigner
4109174d00 Add quick check for Error {...} at start of the datadds data part 2013-02-07 22:14:57 +00:00
Dennis Heimbigner
bf18c79ce4 include oc2/dap.y in the distribution 2013-01-31 03:34:59 +00:00
Dennis Heimbigner
2200f01f4d fix NCF-218: bug in oc2/dap.y parser 2013-01-30 22:56:12 +00:00
Ward Fisher
71a30406f7 Corrected 2 windows-specific errors when using Visual Studio: 
1. In nc4hdf.c, had a variable declaration located such
that Visual Studio complained and threw an error. Moved
to head of function.

2. Visual Studio was complaining about variable declarations
being made after OCVERIFY/OCDEREF macros.
 2013-01-29 23:33:59 +00:00
Dennis Heimbigner
460ac331e0 1)synchronize with original oc2 2) add some convenience functions 2013-01-29 21:22:05 +00:00
Ward Fisher
21523c8582 Merged changes from cmake branch. oc2 changes are just 
'file property' changes, not sure what exactly.
 2012-12-20 21:50:45 +00:00
Dennis Heimbigner
c11e78314e periodic sync of oc2 dir with the official oc2.0 repository 2012-12-18 21:08:23 +00:00
Dennis Heimbigner
c684a02d87 fix typo 2012-12-07 00:23:50 +00:00
Dennis Heimbigner
c114861e68 fix dfile.c error reporting 2012-12-06 21:17:36 +00:00
Ward Fisher
81280c7878 Merge from latest netcdf-cmake branch. 
- Fixes for Windows.
- CMake-based changes (functionality, tests).
- Smattering of coverity-informed bug-fixes.
 2012-12-05 18:35:42 +00:00
Ward Fisher
f844126d0e Addressed a buffer overrun issue; making the assumption this is an 
error. On the off chance it wasn't an error, a proper fix will be
formulated.
 2012-12-05 17:44:39 +00:00
Dennis Heimbigner
ec761ec8fb null=>NULL error 2012-12-04 23:32:32 +00:00
Dennis Heimbigner
97344d8551 make consistent with svn/oc2.0 2012-12-04 03:32:41 +00:00
Dennis Heimbigner
0803ba20ba fix Jira NCF-208; but note that this causes test.06 to fail because thredds mishandles grids 2012-11-21 23:57:42 +00:00
Ward Fisher
ff631c8156 Merged latest changes from cmake branch. 
o Improved CMake support.
o Cmake module compatibility (netcdf-config*.cmake.in).
 2012-11-19 21:43:12 +00:00
Ward Fisher
afa67452f6 Took some time to address a handful of errors identified by Coverity. 
Primarily focused on memory errors falling into a couple different types:

1) Static overrun errors.
2) Dereference uninitialized memory errors.

make distcheck works after applying these fixes, and coverity no longer sees an issue, so hopefully they are properly resolved.
 2012-11-14 18:24:45 +00:00
Ward Fisher
45f77090a1 Addressed a handful of minor 'fixed-length buffer overrun' 
errors identified by Coverity.  The fixes involved replacing calls
to strcpy, strcat with strncpy, strncat.
 2012-10-31 21:31:47 +00:00