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Author SHA1 Message Date
Ward Fisher
50c3c37d9b
Merge pull request #1635 from NOAA-GSD/ejh_dispatch 
added version number to dispatch table, and check it in nc_def_user_format()
 2020-02-26 16:50:57 -07:00
Edward Hartnett
6f95f655dd
Merge branch 'master' into ejh_dispatch 2020-02-26 16:12:57 -07:00
Ward Fisher
15715945ba
Merge pull request #1645 from NOAA-GSD/ejh_more_compact_tests 
more compact tests, fix for scalar compact vars, better documentation, and change of parameter name for code clarity...
 2020-02-26 15:57:23 -07:00
Edward Hartnett
6fe489c8d5 updated docs on nc_def_var_chunking to describe behavior of scalars 2020-02-26 09:16:30 -07:00
Edward Hartnett
418e428a05 fixed problem with scalar compact 2020-02-26 09:13:12 -07:00
Edward Hartnett
52e3b4659f changed metadata logging to reflect unknown storage if var metadata has not yet be read 2020-02-26 08:59:17 -07:00
Edward Hartnett
b31aedcc8e all tests passing but compact storage for scalars not being properly written in file yet 2020-02-26 08:14:06 -07:00
Edward Hartnett
58d78a7e4c more HDF5 testing of scalar compact variable 2020-02-26 07:34:56 -07:00
Edward Hartnett
3241aca93a include storage in rec_print_metadata() output 2020-02-25 16:12:50 -07:00
Edward Hartnett
6241a6e7a0 more tests for storage, changed var names to reflect stortage 2020-02-25 15:55:34 -07:00
Edward Hartnett
2ff24bd6fe more tests for compact storage 2020-02-25 13:30:38 -07:00
Edward Hartnett
beb47aeb42 test demonstrating HDF5 use of compact scalar dataset 2020-02-25 07:23:27 -07:00
Edward Hartnett
bb266baef5 fixed comments 2020-02-25 07:10:43 -07:00
Edward Hartnett
10eada9c52 fixed warnings 2020-02-25 07:09:00 -07:00
Edward Hartnett
810f9cdb54 refurbishing old test that was commented out 2020-02-25 07:07:58 -07:00
Edward Hartnett
8952c9b9f1 whitespace cleanup of tst_h_vars2.c 2020-02-25 06:44:40 -07:00
Edward Hartnett
5b893d8e0a adding more test for compact var 2020-02-25 05:46:09 -07:00
Edward Hartnett
d2cf7d717d updated documentation of nc_inq_var_chunking() 2020-02-24 14:39:19 -07:00
Edward Hartnett
4b163b65e1 added some testing for compact vars 2020-02-24 14:34:27 -07:00
Ward Fisher
867caa288d
Merge pull request #1632 from NOAA-GSD/ejh_h5_par 
fix setting of MPI launcher in h5_test/run_par_tests.sh
 2020-02-21 12:55:18 -07:00
M. Scot Breitenfeld
9f9b125028 Updated H5Oget_info* and H5Oinfo_t to be compatible with HDF5 1.12.0. 
Issue: build netcdf with hdf5-1.12.0 beta release fails in h5_test directory #1628
 2020-02-20 17:24:29 -06:00
Dennis Heimbigner
44d0dcaad2 Add support for multiple filters per variable. 
re: https://github.com/Unidata/netcdf-c/issues/1584

Support has been added for multiple filters per variable.  This
affects a number of components in netcdf. The new APIs are
documented in NUG/filters.md.

The primary changes are:
* A set of new functions are provided (see __include/netcdf_filter.h__).
    - Obtain a list of the filters associated with a variable
    - Obtain the parameters for a specific filter.
* The existing __nc_inq_var_filter__ function now returns info
  about the first defined filter.
* The utilities (ncgen, ncdump, and nccopy) now support
  an extended format for specifying a sequence of filters.
  The general form is __<filter>|<filter>..._.
* The ncdump **_Filter** attribute now dumps a list of all the
  filters associated with a variable using the above new format.
* Filter specifications can now use a filter name instead of number
  for filters known to the netcdf library, which in turn is taken
  from the HDF5 filter registration page.
* New errors are defined: NC_EFILTER and NC_ENOFILTER. The latter
  is returned if an attempt is made to access an unknown filter.
* Internally, the dispatch table has been extended to add a function
  to handle all of the filter functions.
* New, filter-related, tests were added to nc_test4.
* A new plugin was added to the plugins directory to help with testing.

Notes:
1. The shuffle and fletcher32 filters are not part of the multifilter system.

Misc. changes:
1. A debug module was added to libhdf5 to help catch error locations.
 2020-02-16 12:59:33 -07:00
Edward Hartnett
07ce91a137
Merge branch 'master' into ejh_h5_par 2020-02-15 09:09:35 -07:00
Edward Hartnett
a8684c730c fixed merge conflict in RELEASE_NOTES 2020-02-15 06:42:49 -07:00
Ward Fisher
3bcdb5fbf1
Merge pull request #1634 from NOAA-GSD/ejh_mem_fix 
fix leak of HDF5 typeids
 2020-02-13 17:07:42 -07:00
Ward Fisher
e5161c8c9e
Merge pull request #1637 from NOAA-GSD/ejh_more_unlim_tests 
more tests for variables that share multiple unlimited dimensions
 2020-02-12 16:59:02 -07:00
Edward Hartnett
8b9298c58d more checking in 3D test 2020-02-12 08:21:52 -07:00
Edward Hartnett
fe70e818e8 checking 3D file again after close 2020-02-12 08:18:41 -07:00
Edward Hartnett
6e316f44a6 switched to vara functions in 3D test 2020-02-12 08:17:35 -07:00
Edward Hartnett
fe96b6a3e5 checking 2nd var data in 3D test 2020-02-12 08:14:13 -07:00
Edward Hartnett
77ae2cfecc improving 3d test 2020-02-12 08:11:37 -07:00
Edward Hartnett
2addd91215 added another var to 2D test 2020-02-12 08:10:16 -07:00
Edward Hartnett
550b8fa188 better 3d unlimited testing 2020-02-12 08:06:04 -07:00
Edward Hartnett
d922af9820 adding 3d test 2020-02-12 08:04:32 -07:00
Edward Hartnett
93ef9b1bdc adding 3d test 2020-02-12 07:49:04 -07:00
Edward Hartnett
4ea78cc985 testing two unlimited dims 2020-02-12 07:45:59 -07:00
Edward Hartnett
168850c373 testing two unlimited dims 2020-02-12 07:45:29 -07:00
Edward Hartnett
4683a4da3b testing two unlimited dims 2020-02-12 07:44:54 -07:00
Edward Hartnett
2f9856b2e6 testing two unlimited dims 2020-02-12 07:30:00 -07:00
Edward Hartnett
bf87013c6b adding test 2020-02-12 07:27:51 -07:00
Edward Hartnett
fe31d48a01 adding test 2020-02-12 07:25:02 -07:00
Edward Hartnett
4c9f1d91e4 making room for new tests 2020-02-12 07:21:22 -07:00
Edward Hartnett
1cd37f1e57 whitespace cleanup 2020-02-12 07:16:12 -07:00
Edward Hartnett
f326b6ad37 added in decl for num_obj for large file builds 2020-02-11 17:21:53 -07:00
Edward Hartnett
03c7e61b20 merged changes from master 2020-02-11 17:20:22 -07:00
Edward Hartnett
05a6ff74b2 merged changes from master 2020-02-11 17:19:53 -07:00
Edward Hartnett
15059a18b7 merged changes from master 2020-02-11 17:19:25 -07:00
Ward Fisher
0a9e5c31bb
Merge pull request #1629 from NOAA-GSD/ejh_more_szip_7 
check szip parameters for validity, plus all other outstanding szip work...
 2020-02-11 17:03:56 -07:00
Ward Fisher
b5faf8d8a4 Added a ctest script with DAP tests enabled. 2020-02-11 15:09:29 -07:00
Edward Hartnett
21e6fcbdf3 merged changes from master branch 2020-02-11 04:50:48 -07:00