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Author SHA1 Message Date
Dennis Heimbigner
4077594a55 Remove conflicts; does not work with OSX 2022-01-31 17:16:23 -07:00
Dennis Heimbigner
6a3dfc2d31 Update against main to remove conflicts 2022-01-31 12:23:27 -07:00
Ward Fisher
8b328d1207
Merge pull request #2197 from DennisHeimbigner/zquantize.dmh 
Add complete bitgroom support to NCZarr
 2022-01-28 16:20:00 -07:00
Ward Fisher
a0524208ad
Merge pull request #2204 from WardF/gh2203.wif 
Correct a memory leak as reported in #2203
 2022-01-28 15:59:13 -07:00
Ward Fisher
df52eb7805 Correct a memory leak as reported in https://github.com/Unidata/netcdf-c/issues/2203 2022-01-28 14:47:09 -07:00
Dennis Heimbigner
610d8ebf51 Fix conflicts with main 2022-01-28 13:12:03 -07:00
Dennis Heimbigner
89cc20a20d Rename GranularBitGroom to GranularBitRound 
As per Charlie Zender's request (https://github.com/Unidata/netcdf-c/pull/2197#issuecomment-1022762863), the GranularBitGroom name is changed to GranularBitRound
with attendant code changes.
 2022-01-28 13:04:16 -07:00
Ward Fisher
e034e76ac3
Merge pull request #2202 from WardF/gh1636.wif 
Merge #1636
 2022-01-27 13:55:03 -07:00
Ward Fisher
fb59a724d7 Modify cmakelists.txt to generate oc2 auth html file whenever a doxygen-enabled build is run. 2022-01-27 13:09:52 -07:00
Ward Fisher
b07f1cd952 Merge branch 'NUG_clean_ethan' of https://github.com/ethanrd/netcdf-c into gh1636.wif 2022-01-27 12:54:06 -07:00
Ward Fisher
58199ee46c
Merge pull request #2201 from WardF/gh2152.wif 
Resolvee conflict in PR 2152
 2022-01-25 13:15:17 -07:00
Ward Fisher
4d13f8ef7e Merge branch 'stratus.dmh' of https://github.com/DennisHeimbigner/netcdf-c into gh2152.wif 2022-01-25 11:20:20 -07:00
Ward Fisher
7aa541e288
Merge pull request #2200 from WardF/gh2118.wif 
Merge PR #2118
 2022-01-25 11:17:13 -07:00
Ward Fisher
1d3d2ea5eb Missed a merge conflict marker, fixed that. 2022-01-25 10:43:42 -07:00
Ward Fisher
89decab388 Merge branch 'mingw-w64-diskless' of https://github.com/mjwoods/netcdf-c into gh2118.wif 2022-01-25 10:31:44 -07:00
Ward Fisher
b092f7ddae
Merge pull request #2199 from WardF/github_actions_mingw.wif 
Add MSYS2/MinGW64 to Github Actions
 2022-01-25 10:05:35 -07:00
Ward Fisher
b1b59e1760 Correct trigger event for mingw tests to pull_request from push' 2022-01-24 16:31:34 -07:00
Ward Fisher
a8c5307ed3 Removing cmake-based tests for now. 2022-01-24 16:23:42 -07:00
Ward Fisher
16115303a5 Missing pipe character. 2022-01-24 16:15:57 -07:00
Ward Fisher
452934e593
Merge pull request #2150 from edwardhartnett/ejh_fix 
fixed benchmark program run
 2022-01-24 16:14:20 -07:00
Ward Fisher
05e207f5ca Syntax error. 2022-01-24 16:12:11 -07:00
Ward Fisher
acbbde16a1 Syntax error. 2022-01-24 16:10:51 -07:00
Ward Fisher
db98c57af6 HDF5 configuration diagnostic output 2022-01-24 16:09:39 -07:00
Ward Fisher
472e4c8b36 Oh right, Unix Makefiles 2022-01-24 16:02:45 -07:00
Ward Fisher
3058b760ad Force CMake to use gcc 2022-01-24 15:59:10 -07:00
Ward Fisher
7e1c770dff Adding hdf5 info for cmake-based tests. 2022-01-24 15:55:13 -07:00
Ward Fisher
f12eb2d0f9 Moving on to cmake-based github actions. 2022-01-24 15:47:27 -07:00
Dennis Heimbigner
4e167d0483 Update release notes 2022-01-24 15:38:53 -07:00
Ward Fisher
e2d917575d Remove stray character. 2022-01-24 15:30:01 -07:00
Dennis Heimbigner
446348ed18 Add complete bitgroom support to NCZarr 
re: PR https://github.com/Unidata/netcdf-c/pull/2088
re: PR https://github.com/Unidata/netcdf-c/pull/2130
replaces: https://github.com/Unidata/netcdf-c/pull/2140

Changes:
* Add NCZarr-specific quantize functions to the dispatch table.
* Copy (modified) quantize code from libhdf5 to NCZarr
* Add quantize invocation to zvar.c
* Add support for _QuantizeBitgroomNumberOfSignificantDigits
and _QuantizeGranularBitgroomNumberOfSignificantDigits to ncgen.
* Modify nc_test4/tst_quantize.c to allow it to be used both for hdf5
  and for nczarr.
* Make dap4 properly handle quantize functions in dispatch table.
* Add quantize attribute support to ncgen.

Other changes:
* Caught and fixed some S3 problems
* Fixed some nczarr fillvalue problems.
* Fixed some nczarr cache problems.
* Cleanup some flaws in libdispatch/dinfermodel.c
* Allow byterange requests to S3 be readable by dinfermodel.c/check_file_type
* Remove the libnczarr ztracedispatch code (big change).
 2022-01-24 15:22:24 -07:00
Ward Fisher
27db0f2354 More tweaks. 2022-01-24 15:21:29 -07:00
Ward Fisher
3c017da5e3 Collapse build and run test steps into a single step, no need to build all the tests before seeing if any fail. 2022-01-24 15:11:58 -07:00
Ward Fisher
17702fa80c More cleanup. 2022-01-24 15:01:23 -07:00
Ward Fisher
5a674640d7 Cleaned up another undefined reference. 2022-01-24 14:44:28 -07:00
Ward Fisher
34b096515c Dangling undefined references to nulldup. These should be unified in a header, but that is a separate issue to open/resolve. For now, resolving these as part of getting mingw/msys2-based github actions working. 2022-01-24 13:48:41 -07:00
Ward Fisher
6225915f52 Missing symbol in MSYS2/MinGW compilation. 2022-01-24 13:35:04 -07:00
Ward Fisher
3898d4f80a Remove stray text. 2022-01-24 13:18:05 -07:00
Ward Fisher
84070ad177 Next iteration of compilation test. 2022-01-24 13:08:55 -07:00
Ward Fisher
08598a761f Additional compilation work. 2022-01-24 12:20:04 -07:00
Ward Fisher
e8e3141cb1 Really simplify things. 2022-01-24 11:45:46 -07:00
Ward Fisher
0333da7be5 Clean up some Unix-related cruft. 2022-01-24 11:38:21 -07:00
Ward Fisher
ddd675a6d7 Temporarily disable cache 2022-01-24 11:30:14 -07:00
Ward Fisher
d0ad57fb3e Further developments unfolding. 2022-01-24 11:24:45 -07:00
Ward Fisher
d76fbe3fc2 Remove stray text. 2022-01-24 11:06:21 -07:00
Ward Fisher
3a12cee940 Working on MinGW/MSYS2 support. Attempting workflow with system-installed libhdf5 2022-01-24 11:05:33 -07:00
Ward Fisher
5650ee3e3b Remove stale travis-ci configuration file. 2022-01-24 11:02:28 -07:00
Ward Fisher
a6e7ad17a2 Added cmake to the mingw-based test. 2022-01-24 10:54:00 -07:00
Ward Fisher
4ad9f00493 Add skeleton mingw/msys2 Github CI tests. 2022-01-24 10:51:19 -07:00
Ward Fisher
5f3de855e5
Merge pull request #2194 from WardF/update-hdf5-github-actions.wif 
Collapse and update the HDF5 versions being tested on Github Actions.
 2022-01-21 10:34:06 -07:00
Ward Fisher
850c4e816c
Merge pull request #2193 from WardF/Dave-Allured-format-compat-on-reopen 
Dave allured format compat on reopen
 2022-01-21 10:33:20 -07:00