Commit Graph

1212 Commits

Author SHA1 Message Date
Ward Fisher
4a6b93f3ab A test from netcdf-cmake branch made its way into the trunk;
corrected.
2013-01-15 19:48:12 +00:00
Russ Rew
22b411a17c Merged in pnetcdf fixes from Greg Sjardema, to make set_fill_mode work
with parallel-netcdf, to fully implement parallel-netcdf support for
other functions, and to prevent a hang in hdf5 from an eary return in
an nc4_put_vara() call.  Also fixed an nccopy bug when
nc_inq_var_deflate() returns defalate_level of 0, but says the variable
is deflated.
2013-01-15 03:46:46 +00:00
Dennis Heimbigner
c0a7749cf5 1) fix out of date ncgentab/ncgenyy files 2)fix Jira-ncf213 bug and add test case 2013-01-03 20:45:34 +00:00
Ward Fisher
21523c8582 Merged changes from cmake branch. oc2 changes are just
'file property' changes, not sure what exactly.
2012-12-20 21:50:45 +00:00
Dennis Heimbigner
c11e78314e periodic sync of oc2 dir with the official oc2.0 repository 2012-12-18 21:08:23 +00:00
Dennis Heimbigner
adbe2ba5f1 extend r2822 to work when logging is enabled 2012-12-18 19:44:39 +00:00
Ward Fisher
7b91248723 Merged changes from netcdf-branch.
o Changed variable names 'typeid' to 'typeid1' to avoid a namespace conflict
in visual studio.
o Cleaned up a handful of warnings in Visual Studio.
o Addressed a few Coverity-discovered issuesl
o Made changes to CMake-based builds.
2012-12-13 22:09:41 +00:00
Dennis Heimbigner
635a03f2f7 It turns out that when I converted the code
to keep the NC structure pure and independent
of any file format, I neglected to check with
--enable-hdf4. These changes appear to fix that
problem.
2012-12-13 18:22:11 +00:00
Russ Rew
068b35cb4d Updated doxygen and texinfo documentation for nc_var_copy function. 2012-12-13 18:00:03 +00:00
Dennis Heimbigner
5f2eb8afbf Fix a number of potential problems by changing calls to nc_XXX to NC3/4_XXX 2012-12-12 20:05:06 +00:00
Dennis Heimbigner
fc91587e26 Fix weird code in nc.c/free_NC; wonder how it got that way? 2012-12-11 23:51:05 +00:00
Russ Rew
d93d40fd5f Fixed bug NCF-211 with nccopy. Minor updates to top-level README. 2012-12-11 17:49:40 +00:00
Dennis Heimbigner
6480ea723d fix missing decl bug in test_cvt.c; not sure why it is being exercised 2012-12-10 18:28:56 +00:00
Ward Fisher
cf0d0b54f2 Merged latest changes from cmake branch. Fixed a test file, and changed a deallocation call to avoid throwing an error on Windows related to cross-dll memory-management. 2012-12-07 23:21:27 +00:00
Dennis Heimbigner
6bed1e932e fix previous change to ensure proper return code 2012-12-07 02:25:57 +00:00
Dennis Heimbigner
c684a02d87 fix typo 2012-12-07 00:23:50 +00:00
Dennis Heimbigner
c114861e68 fix dfile.c error reporting 2012-12-06 21:17:36 +00:00
Ward Fisher
85382f21bc Fixed a handful of issues identified by Coverity. 2012-12-06 00:06:32 +00:00
Ward Fisher
d526b511ef Correcting an error defining functions when _WIN32 is defined. This
is a side-effect of the larger commit earlier.
2012-12-05 22:06:38 +00:00
Ward Fisher
81280c7878 Merge from latest netcdf-cmake branch.
- Fixes for Windows.
- CMake-based changes (functionality, tests).
- Smattering of coverity-informed bug-fixes.
2012-12-05 18:35:42 +00:00
Ward Fisher
f844126d0e Addressed a buffer overrun issue; making the assumption this is an
error. On the off chance it wasn't an error, a proper fix will be
formulated.
2012-12-05 17:44:39 +00:00
Dennis Heimbigner
ec761ec8fb null=>NULL error 2012-12-04 23:32:32 +00:00
Dennis Heimbigner
97344d8551 make consistent with svn/oc2.0 2012-12-04 03:32:41 +00:00
Russ Rew
f8ec45d20d Fix NCF-209, bug causing netcdf-fortran build to get assertion violation in 'make check' 2012-12-03 21:15:30 +00:00
Ward Fisher
027e503c3e Fixed a dangling pointer post-free. Marcos uncovered this issue
when using netcdf on linux via JNI.
2012-11-27 23:56:36 +00:00
Dennis Heimbigner
0803ba20ba fix Jira NCF-208; but note that this causes test.06 to fail because thredds mishandles grids 2012-11-21 23:57:42 +00:00
Russ Rew
0eef2f4c87 Add suffix support for nccopy -e option 2012-11-21 20:46:43 +00:00
Dennis Heimbigner
a53682fc66 fix Jira NCF-207: double call to del_from_NCLIST 2012-11-21 17:52:49 +00:00
Ward Fisher
876861cc07 Corrected a static-memory overrun. It was causing a segfault on my
32-bit linux VM, but nowhere else.  Coverity identified the issue 
(defect 743616), and correcting it fixed the crash.
2012-11-20 23:00:17 +00:00
Russ Rew
7e6ffcb334 Fix ncdump bug on 32-bit platforms 2012-11-20 21:49:28 +00:00
Ward Fisher
ff631c8156 Merged latest changes from cmake branch.
o Improved CMake support.
o Cmake module compatibility (netcdf-config*.cmake.in).
2012-11-19 21:43:12 +00:00
Dennis Heimbigner
cb1f6f0ae9 repair bad dap names 2012-11-19 21:26:34 +00:00
Russ Rew
920e248b61 Stop escaping '%' in CDL names 2012-11-19 21:14:41 +00:00
Dennis Heimbigner
047967515a fix tests to work with non-escaped % 2012-11-19 20:59:43 +00:00
Russ Rew
8b63afda70 Fix portability bug, no arithmetic on void * pointers 2012-11-19 20:02:22 +00:00
Russ Rew
592a120a55 Fixed bug NCF-206 (Fix strided access for NC_STRING type). Verified
fix with new test for strided access for NC_STRING type.
2012-11-19 17:20:53 +00:00
Ward Fisher
109460c42e Added the new test (tst_mud.sh) to the CMake build system. 2012-11-19 16:56:44 +00:00
Russ Rew
8e98e3727d Fixed bug NCF-144 (ncdump of variables with multiple unlimited
dimensions).  Added comprehensive tests that include variables with
lots of combinations of 0 through 4 fixed and unlimited dimensions.
2012-11-16 21:37:43 +00:00
Ward Fisher
afa67452f6 Took some time to address a handful of errors identified by Coverity.
Primarily focused on memory errors falling into a couple different types:

1) Static overrun errors.
2) Dereference uninitialized memory errors.

make distcheck works after applying these fixes, and coverity no longer sees an issue, so hopefully they are properly resolved.
2012-11-14 18:24:45 +00:00
Ward Fisher
3232c1182c Merged latest changes from the cmake branch. 2012-11-12 16:34:48 +00:00
Ward Fisher
d6179aca32 Merged changes from the trunk. 2012-11-12 15:59:42 +00:00
Ward Fisher
645d1dbaaf Moved the check for szip libraries so that it is only sought out if hdf5 includes szip support. 2012-11-09 23:11:01 +00:00
Ward Fisher
9f443e01cf Refactored how HDF5 is searched for. 2012-11-09 22:45:33 +00:00
Ward Fisher
9b751ac7af Modified method for locating szip.lib 2012-11-09 21:19:17 +00:00
Ward Fisher
c127c03923 2012-11-07 17:35:35 +00:00
Ward Fisher
f4dea1a337 2012-11-07 17:34:05 +00:00
Ward Fisher
a3341e1987 2012-11-07 17:30:12 +00:00
Ward Fisher
cc25ae9c4b 2012-11-05 22:52:14 +00:00
Ward Fisher
9c8c3b468a 2012-11-05 22:44:01 +00:00
Ward Fisher
ef140d0df7 Corrected an issue with custom .dll names. 2012-10-31 22:30:10 +00:00