Commit Graph

539 Commits

Author SHA1 Message Date
Ward Fisher
3f83cc4926 Merge branch 'master' into inmem2.dmh 2018-05-16 14:24:19 -06:00
Ward Fisher
23abe014c0 Threads doesn't need to be required. 2018-05-15 12:19:33 -06:00
Ward Fisher
d54e133e8d Merge branch 'master' into appveyor.wif 2018-05-15 12:01:54 -06:00
Ward Fisher
27ca221bdb Merge branch 'master' into appveyor.wif 2018-05-14 13:19:17 -06:00
Dennis Heimbigner
3c7ffcc6d1 Fix https://github.com/Unidata/netcdf-c/issues/963
Fix https://github.com/Unidata/netcdf-c/issues/962

1. remove the --disable-diskless option since it is no
   longer needed. Similarly for CMakeLists.txt.
2. Fixed nc4files.c where BAIL and return were mixed
   leading to situation where cleanup code was not
   being invoked. This probably occurs elsewhere,
   but I did not find any specifically.
2018-05-11 15:30:19 -06:00
Ed Hartnett
5526ca65d1 created libhdf5, moved some files 2018-05-08 11:58:01 -06:00
luz.paz
74fbacdb82 Misc. source comment typos
Some are user-facing. Found via `codespell` and through the downstream FreeCAD.
2018-04-26 23:04:01 -04:00
Ward Fisher
395841ee9b Added a cmake-based option to explicitly turn off shell script tests. 2018-04-26 16:27:20 -06:00
Ward Fisher
28ce3e4a8c Added fenceposts around bash scripts, excluding the bash.exe included with Windows 10 (for now) when searching to see if bash is available. 2018-04-26 14:38:56 -06:00
Ward Fisher
2ee4e80c2b Typo3. 2018-04-25 14:23:25 -06:00
Ward Fisher
545857ded0 Typo2. 2018-04-25 14:13:45 -06:00
Ward Fisher
569adf0981 Typo. 2018-04-25 14:10:56 -06:00
Ward Fisher
4048da1ba1 Added output from looking for m4 executable. 2018-04-25 14:02:10 -06:00
Ward Fisher
663f7706f1 Added threads package to cmake build. 2018-04-24 16:15:26 -06:00
Dennis Heimbigner
3b0fb561d6 Make change work with cmake 2018-04-22 13:19:12 -06:00
Ward Fisher
1ff184d988 Enabled CDF5 support by default, in support of https://github.com/Unidata/netcdf-c/issues/931 2018-04-19 13:26:58 -06:00
Ward Fisher
308a840358
Merge branch 'master' into index.dmh 2018-03-26 17:06:19 -06:00
Ward Fisher
f460746a8b Silenced warning in CMakeLists.txt 2018-03-26 11:53:31 -06:00
Ward Fisher
36c4b7947d Merge branch 'master' into newhash1.dmh 2018-03-20 11:20:14 -06:00
Dennis Heimbigner
25f062528b This completes (for now) the refactoring of libsrc4.
The file docs/indexing.dox tries to provide design
information for the refactoring.

The primary change is to replace all walking of linked
lists with the use of the NCindex data structure.
Ncindex is a combination of a hash table (for name-based
lookup) and a vector (for walking the elements in the index).
Additionally, global vectors are added to NC_HDF5_FILE_INFO_T
to support direct mapping of an e.g. dimid to the NC_DIM_INFO_T
object. These global vectors exist for dimensions, types, and groups
because they have globally unique id numbers.

WARNING:
1. since libsrc4 and libsrchdf4 share code, there are also
   changes in libsrchdf4.
2. Any outstanding pull requests that change libsrc4 or libhdf4
   are likely to cause conflicts with this code.
3. The original reason for doing this was for performance improvements,
   but as noted elsewhere, this may not be significant because
   the meta-data read performance apparently is being dominated
   by the hdf5 library because we do bulk meta-data reading rather
   than lazy reading.
2018-03-16 11:46:18 -06:00
Ward Fisher
ede8f1b02e Bumping to post-4.6.1-release, for merge back into master. 2018-03-15 11:29:32 -06:00
Ed Hartnett
3e6661e1b1 fixed name 2018-03-05 04:22:15 -07:00
Ed Hartnett
17f7a76356 moved HDF4 tests 2018-03-05 03:45:18 -07:00
Dennis Heimbigner
f6a45b942e Merge branch 'master' into newhash1.dmh 2018-03-01 22:13:50 -07:00
Ward Fisher
3ccce81190 Accomodating special characters in path name. 2018-02-28 12:18:20 -07:00
Ward Fisher
1f6264273e
Merge branch 'master' into newhash1.dmh 2018-02-27 12:15:06 -07:00
Ward Fisher
cebe81a742 Corrected logic error in cmake. 2018-02-26 17:16:15 -07:00
Ward Fisher
18c47417f7 Updated ac, cmake based builds to require parallel functionality when parallel tests are requested. 2018-02-26 17:08:26 -07:00
Dennis Heimbigner
8cb1fc4cfe This is the second step in refactoring the libsrc4 code.
The first was branch newhash0.dmh.

As with newhash0.dmh, these changes should be transparent.
2018-02-24 20:36:24 -07:00
Ward Fisher
f9f27c5ab7
Merge branch 'master' into newhash0.dmh 2018-02-21 14:19:43 -07:00
Ward Fisher
40805e5dfa
Merge branch 'master' into ejh_hdf4_dispatch_unidata2 2018-02-16 13:02:05 -07:00
Ed Hartnett
13fcc67d90
Merge branch 'master' into ejh_hdf4_dispatch_unidata2 2018-02-15 13:25:11 -07:00
Ben Boeckel
b432a527c4 c: remove __CHAR_UNSIGNED__
In C, `char`, `signed char`, and `unsigned char` are three separate,
distinct types, so just because `char` happens to be signed does not
mean it is interchangeable with `signed char`.
2018-02-14 17:24:49 -05:00
Ben Boeckel
a7057925d6 configure: remove unused configure checks
These checks all control variables which are unused within the codebase.
2018-02-14 17:24:45 -05:00
Ben Boeckel
2c14d52c46 cmake: include modules by name
This allows for toolchains to override these modules.
2018-02-14 17:23:21 -05:00
Ward Fisher
30163bcd34 Fix syntax for NC_EXTRA_DEPS 2018-02-09 12:57:11 -07:00
Ward Fisher
d9e9e2bf52
Merge branch 'master' into newhash0.dmh 2018-02-09 11:46:18 -07:00
Ed Hartnett
392a12a7c2 attempting fix for cmake HDF4 build problem when netcdf-4 is not built 2018-02-09 08:26:58 -07:00
Ed Hartnett
2cbb4f6b64 attempting fix for cmake HDF4 build problem when netcdf-4 is not built 2018-02-09 07:44:40 -07:00
Dennis Heimbigner
727b613459 This is the initial step in moving to the new higher performance
(I hope) metadata mechanism. This mostly just adds new pieces of
code (e.g. nclistmap) and does some minor fixes.

It should be transparent to everything else.
The next set of changes will be the big step.
2018-02-08 19:53:40 -07:00
pedro-vicente
23b5e5bd8d changes to detect HDF5 HL, build with CRT and detect ZLIB in HDF5 2018-02-08 13:45:29 -05:00
Ed Hartnett
2358d4a910 moved HDF4 to its own dispatch layer 2018-02-08 06:20:58 -07:00
Ward Fisher
d02a905aa9 Updated typo. 2018-02-02 20:27:06 -07:00
Ward Fisher
c1d54b0213 Added check for genlib.h 2018-02-02 20:57:55 -06:00
Ward Fisher
27693ba4a3
Merge branch 'master' into nc3-per-var-fill-v2 2018-02-01 11:45:40 -07:00
Ward Fisher
6eb8dd3bfc Fixes in support of https://github.com/Unidata/netcdf-c/issues/805 2018-01-25 13:07:33 -07:00
Ward Fisher
8f6c1ed6c7 Preparing for 4.6.1 dev cycle. 2018-01-24 15:46:38 -07:00
Ward Fisher
d0339c8902 Merge branch 'pr-catchup' into v4.6.0-release-branch 2018-01-24 15:51:24 -06:00
Ward Fisher
d1296e5d9a
Merge branch 'master' into nc3-per-var-fill-v2 2018-01-23 17:36:14 -07:00
Ward Fisher
7192ac6a6f Turned off filter testing by default. 2018-01-23 18:27:14 -06:00