Commit Graph

300 Commits

Author SHA1 Message Date
Ward Fisher
2425d6610e Merge branch 'ejh_configure_fix' of https://github.com/NetCDF-World-Domination-Council/netcdf-c into ejh_even_more_merges 2017-10-31 12:54:58 -06:00
Ed Hartnett
d8ffc9e55d Merge branch 'master' into ejh_configure_fix 2017-10-27 05:12:26 -06:00
Ward Fisher
178ed4aa98 Merge branch 'typedef_schar' of https://github.com/wkliao/netcdf-c into ejh_more_merges 2017-10-26 14:35:57 -06:00
Ed Hartnett
c3b4526c94 fixed handling of --enable-parallel4 2017-10-26 14:05:04 -06:00
Ed Hartnett
39b738411f cause configure to fail if --enable-pnetcdf is specified but pnetcdf is not found 2017-10-26 05:38:31 -06:00
Ward Fisher
48f0938c21 Corrected a logic error in configure.ac, reported in esupport ticket HHV-610093 2017-10-25 11:12:15 -06:00
Ward Fisher
dfe92e6d39 Typo 2017-10-16 10:35:09 -06:00
Ward Fisher
b52f3dd0d5 Corrected issue with nc-config generatred by autotools. 2017-10-16 10:30:47 -06:00
Ward Fisher
3c61d86367 Syntax corrections. 2017-09-26 14:01:21 -06:00
Ward Fisher
a812b69ce4 Added hooks for netcdf_meta.h cdf5 support into autotools based build as well. 2017-09-26 11:33:33 -06:00
Ward Fisher
86cfb9b39c Disable CDF5 support by default for the time being. 2017-09-25 13:19:56 -06:00
Ward Fisher
a5a9e483ff Corrected an issue with --has-szlib 2017-09-18 14:40:51 -06:00
Ward Fisher
62d80a3f8f Corrected problem in configure.ac 2017-09-15 16:11:57 -06:00
Ward Fisher
035ec80fb2 Wiring in CDF5 configure-time option. 2017-09-13 15:25:40 -06:00
Wei-keng Liao
8b6d131cbe Because ncx.c and putget.c are to be released with the package in case users do not have m4, the generation of the two C files cannot depend on the configure option of --enable-erange-fill. This commit fixes this problem by replacing m4 conditional define with C conditional preprocess. 2017-08-20 14:32:57 -05:00
Ward Fisher
05d3d7e9f5 Merge remote-tracking branch 'origin/d4tempfile.dmh' into v4.5.0-release-branch 2017-08-07 10:12:36 -06:00
Dennis Heimbigner
4d8fbbf501 If DAP (2 or 4) is enabled, but diskless is disabled, then the
dap code will create a real temporary file in which to store the
converted metadata for the DAP .dds or .dmr.

It was assumed that the nc_close code would reclaim the
temporary file. For DAP2, reclamation occurs in the ncio
code. For DAP4, it was assumed that the libsrc4 code would do
the reclamation, but for whatever reason, this is not happening.
Thus, in this situation, a temporary file is left in the file
system. Aside from being irritating to users, this screws up
'make distcheck'.

So the DAP4 code is fixed to ensure that the temporary file is
properly reclaimed independent of the libsrc4 code.
2017-08-05 22:41:31 -06:00
Dennis Heimbigner
9719fbfbad re: hithub issue https://github.com/Unidata/netcdf-c/issues/435
Some temporary files are being left in a tempdir (e.g. /tmp
under *nix*).

The situation is described tersely in
netcdf-c/docs/auth.html#REDIR Basically, when a url is used that
requires redirection, a physical cookiejar file is required
to exist in the file system in order for this to work.

Since it was difficult to figure out when redirection was
being used (it was internal to libcurl) I needed to be prepared for that
eventuality. The result was that I always created a cookiejar file if one
was not specified in the rc file. This actually occurs in two places:
one inside oc2 and one inside libdap4.

The solution was two-fold:
1. do not use a cookiejar directory -- create cookiejar file directly
2. ensure that all cookiejar related files are reclaimed by nc_close().
Note that if nc_close (or nc_abort) is not called for whatever reason,
then reclamation will not occur.
2017-07-05 10:03:48 -06:00
Wei-keng Liao
6b85d54d94 typedef schar to signed char 2017-06-08 23:55:25 -05:00
Ward Fisher
b73c81697c Removed a line in configure.ac that is potentially redundant and throws an error on some systems. In support of https://github.com/Unidata/netcdf-c/issues/413 2017-06-08 12:38:43 -06:00
Ward Fisher
3a0b0d5339 Replaced sed with configure_ac_files, since sed may not be available. 2017-06-07 13:21:07 -06:00
Ward Fisher
bad0058410 Corrected a missed string. 2017-06-01 13:40:04 -06:00
Ward Fisher
ec33411c6c Bumped revision information to next version. 2017-06-01 13:35:39 -06:00
Ward Fisher
a077289464 Refactored hdf4 chunking test a little bit. 2017-06-01 09:11:52 -06:00
Ward Fisher
08f7d06eb6 Refactoring hdf4 chunking test in similar fashion to hdf5 compatibility test. Files are linked via AC_CONFIG_LINKS instead of shuffling things around in a shell script. 2017-06-01 09:02:31 -06:00
Ward Fisher
df872ac1bc Continued refactoring. 2017-05-31 16:34:46 -06:00
Ward Fisher
ebd1fca32a Working on reformulating test_common.sh 2017-05-31 15:42:59 -06:00
Ward Fisher
02a6585eae Corrected some typos. 2017-05-24 15:49:18 -06:00
Ward Fisher
8dddd222a3 Merged master, DAP4 support into branch. 2017-04-19 09:29:35 -06:00
Ward Fisher
a0bee2e80f Updated open name for relaxed coordinate bounds. 2017-04-06 16:59:21 -06:00
Ward Fisher
908f787b64 Modified enable erange fill option to be disabled by default. 2017-04-05 17:09:39 -06:00
Dennis Heimbigner
6d8809100f Fix pull request https://github.com/Unidata/netcdf-c/pull/374 (dap4.dmh)
1. When running under windows (as opposed to cygwin)
   we need to make sure to not user /cygdrive/ file paths.
   This was ocurring in libdap4/d4read.c, but may occur
   elsewhere.
2. Shell scripts in the git repo are not being checked-out
   with the executable mode set. Had core.filemode set to false.
   Was a major hassle to fix.
2017-04-03 21:39:44 -06:00
Dennis Heimbigner
3432d4f950 Enable dap4 by default; disable dap4 remote tests 2017-03-30 15:25:20 -06:00
Ward Fisher
8e3790f7ce Merged master. 2017-03-09 12:53:28 -07:00
Dennis Heimbigner
3db4f013bf Primary change: add dap4 support
Specific changes:
1. Add dap4 code: libdap4 and dap4_test.
   Note that until the d4ts server problem is solved, dap4 is turned off.
2. Modify various files to support dap4 flags:
	configure.ac, Makefile.am, CMakeLists.txt, etc.
3. Add nc_test/test_common.sh. This centralizes
   the handling of the locations of various
   things in the build tree: e.g. where is
   ncgen.exe located. See nc_test/test_common.sh
   for details.
4. Modify .sh files to use test_common.sh
5. Obsolete separate oc2 by moving it to be part of
   netcdf-c. This means replacing code with netcdf-c
   equivalents.
5. Add --with-testserver to configure.ac to allow
   override of the servers to be used for --enable-dap-remote-tests.
6. There were multiple versions of nctypealignment code. Try to
   centralize in libdispatch/doffset.c and include/ncoffsets.h
7. Add a unit test for the ncuri code because of its complexity.
8. Move the findserver code out of libdispatch and into
   a separate, self contained program in ncdap_test and dap4_test.
9. Move the dispatch header files (nc{3,4}dispatch.h) to
   .../include because they are now shared by modules.
10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts.
11. Make use of MREMAP if available
12. Misc. minor changes e.g.
	- #include <config.h> -> #include "config.h"
	- Add some no-install headers to /include
	- extern -> EXTERNL and vice versa as needed
	- misc header cleanup
	- clean up checking for misc. unix vs microsoft functions
13. Change copyright decls in some files to point to LICENSE file.
14. Add notes to RELEASENOTES.md
2017-03-08 17:01:10 -07:00
Dennis Heimbigner
ee2916f60a Originally, libdap2 was also going to provide
a dap2->netcdf-4 translation. That is now
superceded by dap4. But there is some cruft
in the dap2 code around this that should be removed.
2017-02-21 15:13:37 -07:00
Ward Fisher
3e5124996e Merged https://github.com/Unidata/netcdf-c/pull/319 to resolve some recently arisen conflicts, in preparation for larger merge. 2017-02-01 13:27:29 -07:00
Ward Fisher
0d2727d9da Merging pull request from gsjaardema, see https://github.com/Unidata/netcdf-c/pull/335 for more information. 2017-01-30 12:45:50 -07:00
Ward Fisher
209c31d3f3 Bringing config.h as generagted by cmake in line with config.h as generated by autotools. 2017-01-27 17:41:03 -07:00
Ward Fisher
77b6fbd90b Corrected a typo. 2016-12-05 13:07:09 -07:00
Greg Sjaardema
9491ea2c5b Add hdf5 collective metadata api detection to configure-based build 2016-12-01 13:35:24 -07:00
Wei-keng Liao
154b805dc4 check PnetCDF setting on erange-fill and adjust 2016-11-14 10:41:10 -06:00
Wei-keng Liao
2081ae7099 add configure option --enable-relax-coord-bound for issue #243 2016-11-12 23:58:09 -06:00
Wei-keng Liao
5137be27d1 add configure/cmake option to disable erange_fill 2016-11-03 15:14:14 -05:00
Wei-keng Liao
7572e1cbbf add sizeof checks for unsigned data types 2016-10-28 18:16:49 -05:00
Ward Fisher
b2e4b74e3a Restricted tests from running when they require the utilities but the utilities were not built, in autoconf-based tests. See https://github.com/Unidata/netcdf-c/issues/313 for more information. 2016-08-31 15:38:59 -06:00
Dennis Heimbigner
0cf1e2c49f re: Github issue netcdf-c 300
Modified provenance code to allocate the minimal space
needed for _NCProperties attribute in file.  Basically
required using malloc in the provenance code and in ncdump.
Otherwise should cause no externally visible effects.
Also removed the ENABLE_FILEINFO from configure.ac since
the provenance code is no longer optional.
2016-08-08 09:24:19 -06:00
Ward Fisher
6b79ffaa16 While I'm at it, fixed an incorrect development version. 2016-06-30 12:20:50 -06:00
Ward Fisher
6aa3763622 Bumped version humber in autotools file. 2016-06-28 13:26:02 -06:00
dmh
5bfdf54263 The name hash for hdf4 variables was
not being computed. Fix in nc4file.c.
Not sure how this ever worked for any variable.
What is also weird is that the dim hash is
apparently being computed.
2016-06-01 15:20:36 -06:00