Commit Graph

17 Commits

Author SHA1 Message Date
Ward Fisher
7fd7696940 ncgen directory updated 2018-12-06 15:40:43 -07:00
Dennis Heimbigner
751300ec59 Fix more memory leaks in netcdf-c library
This is a follow up to PR https://github.com/Unidata/netcdf-c/pull/1173

Sorry that it is so big, but leak suppression can be complex.

This PR fixes all remaining memory leaks -- as determined by
-fsanitize=address, and with the exceptions noted below.

Unfortunately. there remains a significant leak that I cannot
solve. It involves vlens, and it is unclear if the leak is
occurring in the netcdf-c library or the HDF5 library.

I have added a check_PROGRAM to the ncdump directory to show the
problem.  The program is called tst_vlen_demo.c To exercise it,
build the netcdf library with -fsanitize=address enabled. Then
go into ncdump and do a "make clean check".  This should build
tst_vlen_demo without actually executing it.  Then do the
command "./tst_vlen_demo" to see the output of the memory
checker.  Note the the lost malloc is deep in the HDF5 library
(in H5Tvlen.c).

I am temporarily working around this error in the following way.
1. I modified several test scripts to not execute known vlen tests
   that fail as described above.
2. Added an environment variable called NC_VLEN_NOTEST.
   If set, then those specific tests are suppressed.

This should mean that the --disable-utilities option to
./configure should not need to be set to get a memory leak clean
build.  This should allow for detection of any new leaks.

Note: I used an environment variable rather than a ./configure
option to control the vlen tests. This is because it is
temporary (I hope) and because it is a bit tricky for shell
scripts to access ./configure options.

Finally, as before, this only been tested with netcdf-4 and hdf5 support.
2018-11-15 10:00:38 -07:00
Dennis Heimbigner
815f4e4a18 Cleanup ncgen memory management 2017-10-30 15:52:08 -06:00
Dennis Heimbigner
8f2f9b74e3 re: pull request https://github.com/Unidata/netcdf-c/pull/364
This is a follow-on in that the old utf8 code was still being
used in ncgen to convert utf8->utf16 when converting cdl to Java
(see genj.c).

The new code apparently has no utf16 support, but it does have
utf32 support. Converting utf32 -> utf16 can be approximated by
truncating the 32bits to 16 bits, unless the top 16 bits are
not zero. This latter condition is unlikely to be common because
it implies use of some rather obscure characters.

So solution is to convert to utf32 and truncate to 16 bits to
get utf16. An error is reported if the high-order truncated 16
bits are not zero. If we get complaints, then I will figure out
how to convert full utf32 to a utf16 pair.

Also removed the old code from ncgen.
2017-06-06 15:23:59 -06:00
tbeu
e2820e4d8a Fix common typos
Detected by https://github.com/vlajos/misspell_fixer
2015-08-20 11:42:05 +02:00
Peter Jansen
ba5d3ca50a fix infinite loop seg fault, where codify called jcodify called codify, should have been jcodify calling ccodify 2014-11-07 14:46:04 -03:00
dmh
1739c50622 Modified a number of tests
to make use of remotetest.unidata.ucar.edu
optional. Purpose is purely for testing
new dts and thredds servers.
2014-10-04 15:59:16 -06:00
dmh
84c1af3b0a fix valgrind discovered problem 2014-09-22 14:31:19 -06:00
dmh
ea7c0fc91b [NCF-280]/TLO-836022
Fix bug where leading backslash digit
in name was not being properly handled.
The reason was that I accidentally attemped to allow \x... and \0...
escapes in identifiers. This make identifiers
with leading escaped digits not work any more.
Also added test case.
2013-11-19 21:58:56 -07:00
dmh
850af2d435 [NCF-271]
Fix bug introduced by [NCF-267].
The bug was that octal constants that had
the highest bit set (e.g. '\200')
were not recognized as proper octal
constants. Fix was to keep as integer
until it was needed as an 8-bit byte.
2013-09-26 10:10:26 -06:00
dmh
10b0ac536f [NCF-267]/SAI-630695
Add support for embedded NUL characters
in character arrays and added some test cases.

Note that embedded NULs in netcdf-4
string constants are still illegal. This is
because strings are not counted in the netcdf
API, so they are implicitly NUL terminated.
2013-09-23 17:11:59 -06:00
dmh
1aa2f695a0 overwrote 2013-09-23 17:11:24 -06:00
dmh
06d91c3084 [NCF-265] again.
Added code to verify that enum constants
(and other constants) are consistent
with the type of the variable or
attribute to which they are assigned.
This addresses the ncdump failure.
2013-09-21 16:19:06 -06:00
dmh
c99058741a [NCF-265]
Ncgen is unable to resolve
ambiguous references to an enum
constant when two different enums
have same econstant name.

Solved by allowing more specific
forms for econstant references.
1. /.../enumname.enumconstname
2. enumname.enumconstname
3. enumconstname

Case 1 is resolved by using the econstant
in the specific enum definition. If none is
found, an error is reported.

Case 2 is resolved by
1. finding an enclosing group with an
   enum definition with the specified name
   and containing the specified econstant.
   If there are more than one, then an error is reported
2. finding all enum definitions in the dataset that have
   the specified enum name and contain the specified
   econstant. If more than one is found, then an error is reported.
If the above two methods fail, then report an error.

Case 3 is similar to case 2, but all enums, irrespective
of name are used if they contains the specified enum constant.

The ref_tst_econst.cdl test in ncdump is causing ncdump
to fail. So there may be yet some problem.
2013-09-20 20:43:09 -06:00
Dennis Heimbigner
880b5c3f7e fix perf bug in bytebuffer code where setlength was always realloc'ing even when enough space was available 2012-08-30 16:43:34 +00:00
Dennis Heimbigner
ea1af11655 Resolve Lynton's vlen problems (partially) re: jira NCF-145 2012-02-14 00:25:32 +00:00
Ed Hartnett
18f4bca367 moving to trunk subdir 2010-06-03 13:24:43 +00:00