Commit Graph

15 Commits

Author SHA1 Message Date
Dennis Heimbigner
b89e3f50d0 Fix introduced alert https://lgtm.com/projects/g/Unidata/netcdf-c/rev/pr-5fdf9cb537c1a981abb3838fdfb061b1088636f0
by removing offending, unused global variable.
2018-11-15 10:31:36 -07:00
Dennis Heimbigner
751300ec59 Fix more memory leaks in netcdf-c library
This is a follow up to PR https://github.com/Unidata/netcdf-c/pull/1173

Sorry that it is so big, but leak suppression can be complex.

This PR fixes all remaining memory leaks -- as determined by
-fsanitize=address, and with the exceptions noted below.

Unfortunately. there remains a significant leak that I cannot
solve. It involves vlens, and it is unclear if the leak is
occurring in the netcdf-c library or the HDF5 library.

I have added a check_PROGRAM to the ncdump directory to show the
problem.  The program is called tst_vlen_demo.c To exercise it,
build the netcdf library with -fsanitize=address enabled. Then
go into ncdump and do a "make clean check".  This should build
tst_vlen_demo without actually executing it.  Then do the
command "./tst_vlen_demo" to see the output of the memory
checker.  Note the the lost malloc is deep in the HDF5 library
(in H5Tvlen.c).

I am temporarily working around this error in the following way.
1. I modified several test scripts to not execute known vlen tests
   that fail as described above.
2. Added an environment variable called NC_VLEN_NOTEST.
   If set, then those specific tests are suppressed.

This should mean that the --disable-utilities option to
./configure should not need to be set to get a memory leak clean
build.  This should allow for detection of any new leaks.

Note: I used an environment variable rather than a ./configure
option to control the vlen tests. This is because it is
temporary (I hope) and because it is a bit tricky for shell
scripts to access ./configure options.

Finally, as before, this only been tested with netcdf-4 and hdf5 support.
2018-11-15 10:00:38 -07:00
Dennis Heimbigner
815f4e4a18 Cleanup ncgen memory management 2017-10-30 15:52:08 -06:00
Dennis Heimbigner
001598ddb6 support fixes for Github issue 323
Fixed issue 323 by properly adding padding
when generating the binary data for use
with nc_put_var/vara.
Also added second testcase.
2016-11-17 15:29:32 -07:00
Ward Fisher
a90b386e0a Refactored 'Constant' to 'NCConstant' in ncgen/ to avoid
reserved word collision on Windows.

Added tst_ncgen4_classic.sh to CMake-based builds.
2013-07-16 20:22:48 +00:00
Dennis Heimbigner
483cbf94fe Added code to support NIL
values for strings in ncgen.
Needs test cases.
2013-07-10 20:00:48 +00:00
Ward Fisher
6096f6b43b Merged changes from CMake branch.
Addressed a handful of memory leaks
reported by Coverity.
2013-03-14 22:49:21 +00:00
Dennis Heimbigner
c50b8c29e2 Fix Jira NCF-233.
Rename nciter.[ch] to nc_iter.[ch] to avoid
potential build issues.
2013-02-28 17:51:09 +00:00
Dennis Heimbigner
766b45b459 fix discovered bug in opaque data handling 2012-05-04 19:22:30 +00:00
Dennis Heimbigner
ea1af11655 Resolve Lynton's vlen problems (partially) re: jira NCF-145 2012-02-14 00:25:32 +00:00
Dennis Heimbigner
599f35d2e6 fix appel problems with data lists 2012-01-09 18:39:37 +00:00
Ed Hartnett
7b47adf3a1 removed executable permissions from all code files 2011-10-04 16:05:11 +00:00
Dennis Heimbigner
199577e143 1. add vars optimize for varm, 2. fix handling of unlimited array of compounds 2011-01-26 21:58:03 +00:00
Dennis Heimbigner
c9a566a42c rebuilt the handling of character datalists to support unlimiteds properly 2010-07-29 20:37:05 +00:00
Ed Hartnett
18f4bca367 moving to trunk subdir 2010-06-03 13:24:43 +00:00