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Ward Fisher 2012-06-25 16:10:26 +00:00
commit f505b49727
40 changed files with 651 additions and 2451 deletions
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4
INSTALL
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@ -2,7 +2,7 @@ Documentation for getting and building netCDF
*********************************************
This document is for getting and building the netCDF C library and
utilities, version 4.2. Other libraries that depend on the netCDF C
utilities, version 4.2.1. Other libraries that depend on the netCDF C
library, such as the Fortran and C++ libraries, are available as
separate distributions that can be built and installed after the C
library is successfully installed. The netCDF-Java library is also a
@ -63,7 +63,7 @@ libraries. (And, optionally, the szlib library). Versions required are
at least HDF5 1.8.8, zlib 1.2.5, and curl 7.18.0 or later.
(Optionally, if building with szlib, get szip 2.0 or later.)
HDF5 1.8.8 and zlib 1.2.5 packages are available from the netCDF-4 ftp
HDF5 1.8.9 and zlib 1.2.7 packages are available from the netCDF-4 ftp
site:
ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4

150
RELEASE_NOTES
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@ -1,45 +1,131 @@
This file contains a high-level description of this package's evolution.
Entries are in reverse chronological order (most recent first).
This file contains a high-level description of this package's
evolution. Releases are in reverse chronological order (most recent
first). Recent releases include references to Jira issue identifiers
for more information, where '[NCF-XXX]' refers to
https://www.unidata.ucar.edu/jira/browse/NCF-XXX .
VERSION COMMENTS
------- --------
4.2.1 Released ????-??-?? (Note: Jira entries include reference to '[NCF-XX]')
Generation of documentation is disabled by default. Use
--enable-doxygen to generate.
4.2.1 Released 2012-??-??
Added a Nspecific NC_MMAP mode flag to modify
behavior of NC_DISKLESS.
4.2.1-rc1 Released 2012-06-18
Ported static and shared libraries (DLL's) for both
32- and 64-bit Windows, including support for DAP
remote access, with netCDF-3 and netCDF-4/HDF5 support
enabled. The environment for this build is
MSYS/MinGW/MinGW64, but the resulting DLLs may be used
with Visual Studio.
[NCF-112][NCF-54][NCF-57][NCF-65]
Implemented diskless files for all netCDF formats. For
nc_create(), diskless operation performs all
operations in memory and then optionally persists the
results to a file on close. For nc_open(), but only
for netcdf classic files, diskless operation caches
the file in-memory, performs all operations on the
memory resident version and then writes all changes
back to the original file on close.
[NCF-110][NCF-109][NCF-5]
Added MMAP support. If diskless file support is
enabled, then it is possible to enable implementation
of diskless files using the operating system's MMAP
facility (if available). The enabling flag is
"--enable-mmap". This is most useful when using
nc_open() and when only parts of files, a single
variable say, need to be read.
Added configure flag for --disable-diskless.
Added nccopy command-line options to exploit diskless
files, resulting in large speedups for some
operations, for example converting unlimited dimension
to fixed size or rechunking files for faster access.
Upgraded doxygen and man-page documentation for ncdump
and nccopy utilities, including new -w option for
diskless nccopy, with an example.
Modified Makefile to allow for concurrent builds and
to support builds outside the source tree, e.g.
'mkdir build; cd build; SOURCE-DIR/configure' where
SOURCE-DIR is the top-level source directory.
Fixed some netCDF-4 bugs with handling strings in
non-netCDF-4 HDF5 files.
[NCF-150]
Fixed bug using nccopy to compress with shuffling that
doesn't compress output variables unless they were
already compressed in the input file.
[NCF-162]
Fixed bug in 64-bit offset files with large records,
when last record variable requires more than 2**32
bytes per record.
[NCF-164]
Fix bug in which passing a NULL path causes netcdf to fail.
[NCF-173]
Fix bug in which passing a NULL path to nc_open causes failure.
[NCF-173]
Upgraded doxygen and man-page documentation for ncdump
and nccopy utilities, including new -w option for
nccopy with an example.
[NCF-26]
Fixed ncgen bugs in parsing and handling opaque data.
Fixed bugs in accessing fixed-length string attributes and variable
values from non-netCDF-4 HDF5 files.
[NCF-150]
Fixed ncdump bug, not escaping characters special to CDL
in enumeration labels.
[NCF-169]
Fixed bug in 64-bit offset files with large records
due to last record variable requiring more than 2**32
bytes per record.
[NCF-164]
Fixed bug reading netCDF int into a C longlong or
writing from longlong to external int on 32-bit
platforms with classic format files. The upper 32
bits of the longlong were not cleared on read or used
on write.
[NCF-171]
Implemented diskless files for both netcdf classic format
and extended (netcdf-4) format. For netcdf classic files,
diskless files also support in-memory caching of disk files.
For nc_create(), diskless operation performs all operations
in memory and then optionally persists the results to a file.
For nc_open(), diskless operation caches the file in-memory,
performs all operations on the memory resident version and then
writes all changes back to the original file.
[NCF-110][NCF-109][NCF-5]
Resolved some erroneous returns of BADTYPE errors and
RANGE errors due to conflating C memory types with
external netCDF types when accessing classic or 64-bit
offset files.
[NCF-172]
Modified ncio mechanism to support multiple ncio packages;
this is so that it is possible to have e.g. posixio and memio
operating at the same time.
Fixed bug with ncdump -t interpreting unit attribute
without base time as a time unit.
[NCF-175]
Cleanup up a bunch of lint issues (unused variables, etc).
Changed port for testing remote access test server to
increase reliability of tests.
Modified ncio mechanism to support multiple ncio
packages, so that it is possible to have e.g. posixio
and memio operating at the same time.
Generation of documentation is disabled by default. Use
--enable-doxygen to generate.
[NCF-168]
Added description of configure flags to installation
guide.
Clarified documentation of arguments to nc__open() and
nc__create() and their default values.
Fixed doxygen installation guide source file to
preserve line breaks in code and scripts.
[NCF-174]
Cleaned up a bunch of lint issues (unused variables,
etc.) and some similar problems reported by clang
static analysis.
Updated and fixed pkg-config source file netcdf.pc.in
to work with separated netCDF language-specific
packages. Also fixed nc-config to call nf-config,
ncxx-config, and ncxx4-config for for backward
compatibility with use of nc-config in current
Makefiles.
[NCF-165] [NCF-179]
4.2 Released 2012-03-19 (Note: Jira entries include reference to '[NCF-XX]')

2
cf
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@ -129,11 +129,11 @@ FLAGS="$FLAGS --enable-extra-tests"
FLAGS="$FLAGS --enable-logging"
#FLAGS="$FLAGS --enable-large-file-tests"
#FLAGS="$FLAGS --disable-testsets"
#FLAGS="$FLAGS --enable-mmap"
#FLAGS="$FLAGS --disable-dap-remote-tests"
#FLAGS="$FLAGS --enable-doxygen"
FLAGS="$FLAGS --enable-logging"
#FLAGS="$FLAGS --disable-diskless"
#FLAGS="$FLAGS --enable-mmap"
FLAGS="$FLAGS --disable-shared"
#FLAGS="$FLAGS --enable-shared"

11
configure.ac
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@ -15,7 +15,7 @@ AC_REVISION([$Id: configure.ac,v 1.450 2010/05/28 19:42:47 dmh Exp $])
AC_PREREQ([2.59])
# Initialize with name, version, and support email address.
AC_INIT([netCDF], [4.2.1-beta], [support-netcdf@unidata.ucar.edu])
AC_INIT([netCDF], [4.2.1-rc1], [support-netcdf@unidata.ucar.edu])
# Create the VERSION file, which contains the package version from
# AC_INIT.
@ -262,6 +262,7 @@ AC_CHECK_LIB([curl],[curl_easy_setopt],[found_curl=yes],[found_curl=no])
#AC_CHECK_LIB([curl.dll],[curl_easy_setopt])
# If curl is required but there is no curl, then complain
if test $require_curl = yes ; then
# Removed. Why assume no curl if we are building DLL?
#if test $enable_dll = yes ; then
# AC_MSG_NOTICE([libcurl not found; continuing])
#elif test $found_curl = no ; then
@ -586,18 +587,18 @@ AC_CHECK_FUNCS([strlcat strerror snprintf strchr strrchr strcat strcpy \
AC_MSG_CHECKING([whether in-memory files are enabled])
AC_ARG_ENABLE([diskless],
[AS_HELP_STRING([--disable-diskless],
[use in-memory (NC_DISKLESS) files])])
[disable support for in-memory (NC_DISKLESS) files])])
test "x$enable_diskless" = xno || enable_diskless=yes
AC_MSG_RESULT($enable_diskless)
# check for useful, but not essential, memio support
AC_CHECK_FUNCS([memmove getpagesize sysconf])
# Does the user want to use the mmap for NC_DISKLESS?
AC_MSG_CHECKING([whether mmap will be used for in-memory files])
# Does the user want to allow use of mmap for NC_DISKLESS?
AC_MSG_CHECKING([whether mmap is enabled for in-memory files])
AC_ARG_ENABLE([mmap],
[AS_HELP_STRING([--enable-mmap],
[use mmap for in-memory (NC_DISKLESS) files])])
[allow mmap for in-memory files])])
test "x$enable_mmap" = xyes || enable_mmap=no
AC_MSG_RESULT($enable_mmap)

100
custom_configure.py
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@ -1,100 +0,0 @@
######
# Custom build script.
#
# Defines a number of options for 'configure' for netcdf4.
# This script will, based on command-line switches,
# configure netcdf source for different builds. If no options
# are specified, it will prompt for configuration options
# interactively.
######
from optparse import OptionParser
import os
C_FLAGS="CFLAGS=\""
LD_FLAGS="LDFLAGS=\""
STD_ARGS="--disable-doxygen "
### Parse the options which were passed to the program.
def parse_options(ops):
cur_args=STD_ARGS
cur_c_flags=C_FLAGS
cur_ld_flags=LD_FLAGS
if ops.BUILD_64 == True:
cur_args += "--host=x86_64-w64-mingw32 "
if ops.BUILD_MIN == True:
cur_args += "--disable-dap --disable-netcdf-4 --disable-diskless "
if ops.BUILD_DEBUG == True:
cur_c_flags = cur_c_flags + "-ggdb -O0 "
cur_ld_flags = cur_ld_flags + "-ggdb -O0 "
if ops.BUILD_STATIC == True:
cur_args += "--enable-static "
if ops.BUILD_32 == True:
cur_c_flags += "-I/c/Users/wfisher/Desktop/hdf5-1.8.8/src -I/c/Users/wfisher/Desktop/hdf-1.8.8/hl/src "
cur_ld_flags += "-static -L/c/GnuWin32/lib/libz.a -L/c/Users/wfisher/Desktop/hdf5-1.8.8/build_win/bin "
else:
cur_c_flags += "-I/c/HDF5189/include "
cur_ld_flags += "-static -L/c/HDF5189/bin "
else:
cur_args += "--disable-static "
if ops.BUILD_SHARED == True:
cur_args += "--enable-shared --disable-utilities "
if os.name == 'nt':
cur_args += "--enable-dll "
if ops.BUILD_32 == True:
cur_c_flags += "-I/c/Users/wfisher/Desktop/hdf5-1.8.8/src -I/c/Users/wfisher/Desktop/hdf-1.8.8/hl/src "
cur_ld_flags += "-L/c/GnuWin32/lib/libz.a -L/c/Users/wfisher/Desktop/hdf5-1.8.8/build_win/bin "
else:
cur_c_flags += "-I/c/HDF5189/include "
cur_ld_flags += "-L/c/HDF5189/bin "
else:
cur_args += "--disable-shared "
return "sh ./configure " + cur_args + " " + cur_c_flags + "\" " + cur_ld_flags + "\""
###
# Main Function.
###
def main():
parser = OptionParser()
parser.add_option("--m32","--build-32",dest="BUILD_32",action="store_true",
help="Enable 32-bit build.",default=False)
parser.add_option("--m64","--build-64",dest="BUILD_64",action="store_true",
help="Enable 64-bit build.",default=False)
parser.add_option("--static",dest="BUILD_STATIC",action="store_true",
help="Enable static build.",default=False)
parser.add_option("--shared","--dynamic",dest="BUILD_SHARED",action="store_true",
help="Enable shard build.",default=False)
parser.add_option("--min","--min_build",dest="BUILD_MIN",action="store_true",
help="Build Minimal netcdf. No netcdf4, dap, diskless, etc.",default=True)
parser.add_option("-d","--debug",dest="BUILD_DEBUG",action="store_true",
help="Build with debug options (-ggdb, -O0)",default=False)
parser.add_option("-e","--echo",dest="ECHO_ONLY",action="store_true",
help="Don't execute configure, just echo output.",default=False)
(options,args) = parser.parse_args()
#print("options:",str(options))
#print("arguments:",args)
all_args = parse_options(options)
print all_args
if options.ECHO_ONLY == False:
os.system(all_args)
main()

5
include/ncdispatch.h
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@ -367,6 +367,11 @@ extern int NCDAP_urlparse(const char* s, void** dapurl);
extern void NCDAP_urlfree(void* dapurl);
extern const char* NCDAP_urllookup(void* dapurl, const char* param);
/* Test for specific set of servers */
extern const char* NC_findtestserver(const char*);
/* Ping a specific server */
extern int NCDAP_ping(const char*);
/* Misc */
extern int NC_getshape(int ncid, int varid, int ndims, size_t* shape);

3
include/netcdf.h
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@ -121,6 +121,7 @@ extern "C" {
#define NC_NOCLOBBER 0x0004 /**< Don't destroy existing file. Mode flag for nc_create(). */
#define NC_DISKLESS 0x0008 /**< Use diskless file. Mode flag for nc_open() or nc_create(). */
#define NC_MMAP 0x0010 /**< Use diskless file with mmap. Mode flag for nc_open() or nc_create(). */
#define NC_CLASSIC_MODEL 0x0100 /**< Enforce classic model. Mode flag for nc_create(). */
#define NC_64BIT_OFFSET 0x0200 /**< Use large (64-bit) file offsets. Mode flag for nc_create(). */
@ -368,7 +369,7 @@ by the desired type. */
#define NC_ESTORAGE (-126) /**< Can't specify both contiguous and chunking. */
#define NC_EBADCHUNK (-127) /**< Bad chunksize. */
#define NC_ENOTBUILT (-128) /**< Attempt to use feature that was not turned on when netCDF was built. */
#define NC_EDISKLESS (-129) /**< Error in using diskless access. */
#define NC_EDISKLESS (-129) /**< Error in using diskless access. */
#define NC4_LAST_ERROR (-129)

8
libdap2/ncdap3.c
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@ -682,3 +682,11 @@ getdefinename(CDFnode* node)
}
return spath;
}
int
NCDAP_ping(const char* url)
{
OCerror ocstat = OC_NOERR;
ocstat = oc_ping(url);
return ocerrtoncerr(ocstat);
}

13
libdap2/test_vara.c
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@ -4,7 +4,7 @@
#include <string.h>
#include <netcdf.h>
#define URL "http://motherlode.ucar.edu:8081/dts/test.06"
#define DTSTEST "/dts/test.06"
/* The DDS in netcdf classic form is as follows:
netcdf test {
@ -78,7 +78,18 @@ main()
int retval,i;
size_t start[RANK];
size_t count[RANK];
char URL[4096];
const char* svc = NULL:
/* Find Test Server *.
svc = NC_findtestserver("dts");
if(svc == NULL) {
fprintf(stderr,"Cannot locate test server\n");
exit(1);
}
strcpy(URL,svc);
strcat(URL,DTSTEST);
memset((void*)target,0,sizeof(target));
if((retval = nc_open(URL, NC_NOWRITE, &ncid)))

40
libdispatch/ddispatch.c
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@ -26,6 +26,21 @@ static struct NCPROTOCOLLIST {
{NULL,NULL,0} /* Terminate search */
};
/* Define the server to ping in order;
make the order attempt to optimize
against future changes.
*/
static const char* servers[] = {
"http://motherlode.ucar.edu:8081", /* try this first */
"http://remotetest.unidata.ucar.edu",
"http://remotetest.ucar.edu",
"http://motherlode.ucar.edu:8080",
"http://motherlode.ucar.edu",
"http://remotetests.unidata.ucar.edu",
"http://remotetests.ucar.edu",
NULL
};
/*
static nc_type longtype = (sizeof(long) == sizeof(int)?NC_INT:NC_INT64);
static nc_type ulongtype = (sizeof(unsigned long) == sizeof(unsigned int)?NC_UINT:NC_UINT64);
@ -46,6 +61,31 @@ NCDISPATCH_initialize(void)
return NC_NOERR;
}
/* search list of servers and return first that succeeds when
concatenated with the specified path part
*/
const char*
NC_findtestserver(const char* path)
{
/* NCDAP_ping is defined in libdap2/ncdap3.c */
#ifdef USE_DAP
const char** svc;
if(path == NULL) path = "";
for(svc=servers;*svc != NULL;svc++) {
char url[4096];
snprintf(url,sizeof(url),"%s%s%s",
*svc,
(path[0] == '/' ? "" : "/"),
path);
int stat = NCDAP_ping(url);
if(stat == NC_NOERR)
return *svc;
}
#endif
return NULL;
}
/* return 1 if path looks like a url; 0 otherwise */
int
NC_testurl(const char* path)

13
libdispatch/dfile.c
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@ -219,7 +219,9 @@ to many extensions to the in-memory space for the file.
Normally, NC_DISKLESS allocates space in the heap for storing
the in-memory file. If, however, the ./configure flags --enable-mmap
is used, then mmap will be used.
is used, and the additional mode flag NC_MMAP
is specified, then the file will be created using the operating system
MMAP facility.
Note that nc_create(path,cmode,ncidp) is equivalent to the invocation of
nc__create(path,cmode,NC_SIZEHINT_DEFAULT,NULL,ncidp).
@ -307,7 +309,7 @@ diskless.nc whose content will be lost when nc_close() is called.
int status = NC_NOERR;
int ncid;
...
status = nc_create("foo_HDF5_classic.nc", NC_DISKLESS, &ncid);
status = nc_create("diskless.nc", NC_DISKLESS, &ncid);
if (status != NC_NOERR) handle_error(status);
@endcode
@ -321,7 +323,7 @@ in a file named diskless.nc when nc_close() is called.
int status = NC_NOERR;
int ncid;
...
status = nc_create("foo_HDF5_classic.nc", NC_DISKLESS|NC_WRITE, &ncid);
status = nc_create("diskless.nc", NC_DISKLESS|NC_WRITE, &ncid);
if (status != NC_NOERR) handle_error(status);
@endcode
@ -457,8 +459,9 @@ access, programs that do not access data sequentially may see some
performance improvement by setting the NC_SHARE flag.
This procedure may also be invoked with the NC_DISKLESS flag
set in the mode argument, but ONLY if the file type is NOT NC_NETCDF4,
which means it must be a classic format file.
set in the mode argument if the file to be opened
is a classic format file. If the file is of type NC_NETCDF4,
then the NC_DISKLESS flag will be ignored.
If NC_DISKLESS is specified, then the whole file is read completely into
memory. In effect this creates an in-memory cache of the file.
If the mode flag also specifies NC_WRITE, then the in-memory cache

5
libsrc/Makefile.am
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@ -19,11 +19,10 @@ nclistmgr.c putget.c attr.c nc3dispatch.c nc.c var.c dim.c ncx.c \
ncx.h lookup3.c pstdint.h ncio.c ncio.h
if BUILD_DISKLESS
libnetcdf3_la_SOURCES += memio.c
if BUILD_MMAP
libnetcdf3_la_SOURCES += mmapio.c
else !BUILD_MMAP
libnetcdf3_la_SOURCES += memio.c
endif !BUILD_MMAP
endif BUILD_MMAP
endif BUILD_DISKLESS
# Does the user want to use ffio, a replacement for posixio for Cray

20
libsrc/ncio.c
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@ -28,10 +28,9 @@ extern int ffio_open(const char*,int,off_t,size_t,size_t*,ncio**,void** const);
# ifdef USE_MMAP
extern int mmapio_create(const char*,int,size_t,off_t,size_t,size_t*,ncio**,void** const);
extern int mmapio_open(const char*,int,off_t,size_t,size_t*,ncio**,void** const);
# else
# endif
extern int memio_create(const char*,int,size_t,off_t,size_t,size_t*,ncio**,void** const);
extern int memio_open(const char*,int,off_t,size_t,size_t*,ncio**,void** const);
# endif
#endif
int
@ -40,12 +39,14 @@ ncio_create(const char *path, int ioflags, size_t initialsz,
ncio** iopp, void** const mempp)
{
#ifdef USE_DISKLESS
if(fIsSet(ioflags,NC_DISKLESS))
if(fIsSet(ioflags,NC_DISKLESS)) {
# ifdef USE_MMAP
if(fIsSet(ioflags,NC_MMAP))
return mmapio_create(path,ioflags,initialsz,igeto,igetsz,sizehintp,iopp,mempp);
# else
else
# endif /*USE_MMAP*/
return memio_create(path,ioflags,initialsz,igeto,igetsz,sizehintp,iopp,mempp);
# endif
}
#endif
#ifdef USE_FFIO
@ -66,10 +67,11 @@ ncio_open(const char *path, int ioflags,
#ifdef USE_DISKLESS
if(fIsSet(ioflags,NC_DISKLESS)) {
# ifdef USE_MMAP
return mmapio_open(path,ioflags,igeto,igetsz,sizehintp,iopp,mempp);
# else
return memio_open(path,ioflags,igeto,igetsz,sizehintp,iopp,mempp);
# endif
if(fIsSet(ioflags,NC_MMAP))
return mmapio_open(path,ioflags,igeto,igetsz,sizehintp,iopp,mempp);
else
# endif /*USE_MMAP*/
return memio_open(path,ioflags,igeto,igetsz,sizehintp,iopp,mempp);
}
#endif
#ifdef USE_FFIO

17
man4/Makefile.am
View File

@ -25,11 +25,6 @@ if BUILD_DOCS
# $(directory)/man_page_1.3: doxyfile.stamp
# $(directory)/man_page_2.3: doxyfile.stamp
# Timestamp to prevent rebuilds.
doxyfile.stamp:
$(DOXYGEN) Doxyfile
echo Timestamp > doxyfile.stamp
# Note: in order to work with distcheck,
# the Doxyfile needs to be preprocessed
# to insert actual location of $(srcdir)
@ -38,13 +33,19 @@ doxyfile.stamp:
#Doxyfile.tmp: Doxyfile
# sed -e 's|$$[({]rootdir[})]|$(abs_top_srcdir)|g' <Doxyfile > ./Doxyfile.tmp
CLEANFILES = doxyfile.stamp html latex man
all-local: doxyfile.stamp
clean-local:
rm -rf $(top_builddir)/man4/man
rm -rf $(top_builddir)/man4/html
rm -rf $(top_builddir)/man4/latex
endif
# Timestamp to prevent rebuilds.
doxyfile.stamp:
$(DOXYGEN) Doxyfile
echo Timestamp > doxyfile.stamp
CLEANFILES = doxyfile.stamp html latex man
# This builds the docs from source, if necessary, and tars up
# everything needed for the website. Run this and copy the resulting
@ -53,5 +54,3 @@ clean-local:
web-tarball: doxyfile.stamp
cd html; tar cf ../netcdf_docs.tar *
gzip -f netcdf_docs.tar
endif

4
man4/install.doc
View File

@ -2,7 +2,7 @@
Documentation for getting and building netCDF
This document is for getting and building the netCDF C library and
utilities, version 4.2. Other libraries that depend on the netCDF C
utilities, version 4.2.1. Other libraries that depend on the netCDF C
library, such as the Fortran and C++ libraries, are available as
separate distributions that can be built and installed after the C
library is successfully installed. The netCDF-Java library is also a
@ -56,7 +56,7 @@ libraries. (And, optionally, the szlib library). Versions required are
at least HDF5 1.8.8, zlib 1.2.5, and curl 7.18.0 or later.
(Optionally, if building with szlib, get szip 2.0 or later.)
HDF5 1.8.8 and zlib 1.2.5 packages are available from the <a
HDF5 1.8.9 and zlib 1.2.7 packages are available from the <a
href="ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4">netCDF-4 ftp
site</a>. If you wish to use the remote data client code, then you
will also need libcurl, which can be obtained from the <a

55
nc-config.in
View File

@ -21,6 +21,7 @@ has_hdf5="@HAS_HDF5@"
has_szlib="@HAS_SZLIB@"
version="@PACKAGE_NAME@ @PACKAGE_VERSION@"
has_f90="no"
if type -p nf-config > /dev/null 2>&1; then
fc=`nf-config --fc`
fflags=`nf-config --fflags`
@ -28,12 +29,20 @@ if type -p nf-config > /dev/null 2>&1; then
has_f90=`nf-config --has-f90`
fi
if type -p ncxx-config > /dev/null 2>&1; then
has_cxx="no"
has_cxx4="no"
if type -p ncxx4-config > /dev/null 2>&1; then
cxx4=`ncxx4-config --cxx`
# cxxflags=`ncxx4-config --cxxflags`
# cxxlibs=`ncxx4-config --cxxlibs`
has_cxx4="yes"
elif type -p ncxx-config > /dev/null 2>&1; then
cxx=`ncxx-config --cxx`
has_cxx=`ncxx-config --has_cxx`
# cxxflags=`ncxx-config --cxxflags`
# cxxlibs=`ncxx-config --cxxlibs`
has_cxx="yes"
fi
usage()
{
cat <<EOF
@ -58,10 +67,18 @@ Available values for OPTION include:
--version Library version
EOF
if type -p ncxx-config > /dev/null 2>&1; then
# When supported by ncxx4-config and ncxx-config, add
# --cxxflags flags needed to compile a netCDF-4 C++ program
# --cxxlibs libraries needed to link a netCDF-4 C++ program
if type -p ncxx4-config > /dev/null 2>&1; then
cat <<EOF
--cxx4 C++ compiler for netCDF-4 C++ library
--has-c++4 whether netCDF-4 C++ API is installed
EOF
elif type -p ncxx-config > /dev/null 2>&1; then
cat <<EOF
--cxx C++ compiler
--has-c++ whether C++ API is enabled in this build
--has-c++ whether C++ API is installed
EOF
fi
@ -70,7 +87,7 @@ if type -p nf-config > /dev/null 2>&1; then
--fc Fortran compiler
--fflags flags needed to compile a Fortran program
--flibs libraries needed to link a Fortran program
--has-f90 whether Fortran 90 API is enabled in this build
--has-f90 whether Fortran 90 API is installed
EOF
fi
@ -86,8 +103,12 @@ all()
echo " --cflags -> $cflags"
echo " --libs -> $libs"
echo
echo " --cxx -> $cxx"
echo " --has-c++ -> $has_cxx"
echo " --cxx -> $cxx"
# echo " --cxxflags -> $cxxflags"
# echo " --cxxlibs -> $cxxlibs"
echo " --has-c++4 -> $has_cxx4"
echo " --cxx4 -> $cxx4"
echo
echo " --fc -> $fc"
echo " --fflags -> $fflags"
@ -183,14 +204,30 @@ while test $# -gt 0; do
echo $version
;;
--has-c++)
echo $has_cxx
;;
--cxx)
echo $cxx
;;
--has-c++)
echo $has_cxx
--has-c++4)
echo $has_cxx4
;;
--cxx4)
echo $cxx4
;;
# --cxxflags)
# echo $cxxflags
# ;;
#
# --cxxlibs)
# echo $cxxlibs
# ;;
--fc)
echo $fc
;;

5
nc_test/Makefile.am
View File

@ -62,6 +62,9 @@ TESTS = $(TESTPROGRAMS)
if BUILD_DISKLESS
TESTS += run_diskless.sh
if BUILD_MMAP
TESTS += run_mmap.sh
endif
if LARGE_FILE_TESTS
TESTS += run_diskless2.sh
endif
@ -81,7 +84,7 @@ endif # USE_VALGRIND_TESTS
# Distribute the .c files so that m4 isn't required on the users
# machine.
EXTRA_DIST = test_get.m4 test_put.m4 run_valgrind_tests.sh \
run_diskless.sh run_diskless2.sh
run_diskless.sh run_diskless2.sh run_mmap.sh
# ref_tst_diskless2.cdl is for diff comparison and to produce tst_diskless2.c
EXTRA_DIST += ref_tst_diskless2.cdl

63
nc_test/run_mmap.sh Executable file
View File

@ -0,0 +1,63 @@
#!/bin/sh
set -e
# Get the target OS and CPU
CPU=`uname -p`
OS=`uname`
#Constants
FILE1=tst_diskless.nc
FILE2=tst_diskless2.nc
FILE3=tst_diskless3.nc
echo ""
echo "*** Testing in-memory (diskless) files with mmap"
HASNC4=`../nc-config --has-nc4`
echo "**** Test diskless+mmap netCDF classic file without persistence"
./tst_diskless mmap
echo "PASS: diskless+mmap netCDF classic file without persistence"
echo ""
echo "**** Test diskless+mmap netCDF classic file with persistence"
rm -f $FILE1
./tst_diskless mmap persist
if test -f $FILE1 ; then
echo "**** $FILE1 created"
# ../ncdump/ncdump $FILE1
echo "PASS: diskless+mmap netCDF classic file with persistence"
else
echo "#### $FILE1 not created"
echo "FAIL: diskless+mmap netCDF classic file with persistence"
fi
rm -f tmp1.cdl tmp2.cdl tmp1.nc tmp2.nc
echo ""
echo "**** Testing nc_open in-memory (diskless+mmap) files"
# clear old files
rm -f tst_diskless3_file.cdl tst_diskless3_memory.cdl
echo ""
echo "**** Create and modify file without using diskless+mmap"
rm -f $FILE3
./tst_diskless3
../ncdump/ncdump $FILE3 >tst_diskless3_file.cdl
echo ""
echo "**** Create and modify file using diskless+mmap"
rm -f $FILE3
./tst_diskless3 diskless mmap
../ncdump/ncdump $FILE3 >tst_diskless3_memory.cdl
# compare
diff tst_diskless3_file.cdl tst_diskless3_memory.cdl
# cleanup
rm -f $FILE3 tst_diskless3_file.cdl tst_diskless3_memory.cdl
exit

53
nc_test/tst_diskless.c
View File

@ -5,6 +5,8 @@ Copyright 2011, UCAR/Unidata. See COPYRIGHT file for copying and
redistribution conditions.
*/
#undef DDBG
#include <config.h>
#include <nc_tests.h>
#include <stdio.h>
@ -20,6 +22,20 @@ redistribution conditions.
#define CAPACITOR "capacitor_value"
#define NUM555 "number_of_555_timer_chips"
#ifdef DDBG
#undef ERR
void fail(int line) {
fflush(stdout);
fprintf(stderr,"\nline=%d\n",line);
fflush(stderr);
exit(1);
}
#define ERR fail(__LINE__)
#endif
/* Control flags */
static int flags, persist, usenetcdf4, mmap;
static void
removefile(int persist, char* filename)
{
@ -37,17 +53,18 @@ removefile(int persist, char* filename)
int
main(int argc, char **argv)
{
int i, flags, persist, usenetcdf4;
int i;
char* filename = "tst_diskless.nc";
/* Set defaults */
persist = 0;
usenetcdf4 = 0;
mmap = 0;
for(i=1;i<argc;i++) {
if(strcmp(argv[i],"netcdf4")==0) usenetcdf4=1;
else if(strcmp(argv[i],"persist")==0) persist=1;
else if(strcmp(argv[i],"mmap")==0) mmap=1;
/* ignore anything not recognized */
}
@ -55,9 +72,12 @@ main(int argc, char **argv)
usenetcdf4 = 0;
#endif
if(mmap)
usenetcdf4 = 0;
flags = usenetcdf4?FLAGS4:FLAGS3;
if(persist) flags |= PERSIST;
if(mmap) flags |= NC_MMAP;
printf("\n*** Testing the diskless API.\n");
printf("*** testing diskless file with scalar vars...");
@ -113,6 +133,33 @@ printf("*** testing diskless file with scalar vars...");
abort(); //ERR;
}
SUMMARIZE_ERR;
if(!usenetcdf4 && persist) {
int ncid, varid0, varid1, varid2;
float float_data = 3.14, float_data_in;
int int_data = 42, int_data_in;
short short_data = 2, short_data_in;
printf("*** testing diskless open of previously created file...");
if (nc_open(filename, flags, &ncid)) ERR;
/* Read and compare */
if (nc_inq_varid(ncid, RESISTOR, &varid0)) ERR;
if (nc_inq_varid(ncid, CAPACITOR, &varid1)) ERR;
if (nc_inq_varid(ncid, NUM555, &varid2)) ERR;
if (nc_get_vara_int(ncid, varid0, NULL, NULL, &int_data_in)) ERR;
if (int_data_in != int_data) ERR;
if (nc_get_vara_float(ncid, varid1, NULL, NULL, &float_data_in)) ERR;
if (float_data_in != float_data) ERR;
if (nc_get_vara_short(ncid, varid2, NULL, NULL, &short_data_in)) ERR;
if (short_data_in != short_data) ERR;
nc_close(ncid);
}
SUMMARIZE_ERR;
printf("*** testing creation of simple diskless file...");
{
#define NDIMS 2

39
nc_test/tst_diskless3.c
View File

@ -34,14 +34,16 @@
#define TITLE " OUTPUT FROM WRF V2.0.3.1 MODEL"
#define ATT_NAME2 "TITLE"
/* Global */
int diskless = 0;
#undef ERR
#define ERR report(status,__LINE__)
static int status = NC_NOERR;
/* Control flags */
static int persist, usenetcdf4, mmap, diskless;
static int diskmode;
void report(int stat, int lno)
{
fprintf(stderr,"line: %d ; %s\n",stat,nc_strerror(stat));
@ -91,7 +93,7 @@ test_two_growing_with_att(const char *testfile)
if((status=nc_close(ncid))) ERR;
/* Reopen the file and check it. */
if((status=nc_open(testfile, NC_DISKLESS|NC_WRITE, &ncid))) ERR;
if((status=nc_open(testfile, diskmode|NC_WRITE, &ncid))) ERR;
if((status=nc_inq_dimlen(ncid, 0, &len_in))) ERR;
if (len_in != r + 1) ERR;
index[0] = r;
@ -131,7 +133,7 @@ test_one_with_att(const char *testfile)
if((status=nc_close(ncid))) ERR;
/* Reopen the file and check it. */
if((status=nc_open(testfile, NC_DISKLESS|NC_WRITE, &ncid))) ERR;
if((status=nc_open(testfile, diskmode|NC_WRITE, &ncid))) ERR;
if((status=nc_inq(ncid, &ndims, &nvars, &natts, &unlimdimid))) ERR;
if (ndims != 1 && nvars != 1 && natts != 0 && unlimdimid != 0) ERR;
if((status=nc_get_var_text(ncid, varid, &data_in))) ERR;
@ -146,10 +148,31 @@ test_one_with_att(const char *testfile)
int
main(int argc, char **argv)
{
diskless = (argc > 1);
int i;
printf("\n*** Testing diskless file: create/modify %s: %s\n",
diskless?"in-memory":"in-file",NCFILENAME);
/* Set defaults */
persist = 0;
usenetcdf4 = 0;
mmap = 0;
diskless = 0;
diskmode = 0;
for(i=1;i<argc;i++) {
if(strcmp(argv[i],"diskless")==0) diskless=1;
else if(strcmp(argv[i],"mmap")==0) mmap=1;
/* ignore anything not recognized */
}
if(diskless)
diskmode |= NC_DISKLESS;
if(diskless && mmap)
diskmode |= NC_MMAP;
printf("\n*** Testing diskless file: create/modify %s",
diskless?"in-memory":"in-file");
if(diskless && mmap)
printf("+mmap");
printf(" %s\n",NCFILENAME);
/* case NC_FORMAT_CLASSIC: only test this format */
nc_set_default_format(NC_FORMAT_CLASSIC, NULL);

8
nc_test4/tst_files5.c
View File

@ -9,7 +9,6 @@
#include "netcdf.h"
#define FILE_NAME "tst_files.nc"
#define URL "http://motherlode.ucar.edu:8081/dts/test.01"
int
main(int argc, char **argv)
@ -52,13 +51,6 @@ main(int argc, char **argv)
strcpy(path_in, "");
path_len = 0;
/* #ifdef USE_DAP */
/* /\* Test with URL. *\/ */
/* if (nc_open(URL, 0, &ncid)) ERR; */
/* if (nc_inq_path(ncid, &path_len, path_in)) ERR; */
/* /\*if (path_len != strlen(URL) || strcmp(path_in, URL)) ERR;*\/ */
/* if (nc_close(ncid)) ERR; */
/* #endif /\* USE_DAP *\/ */
}
SUMMARIZE_ERR;
FINAL_RESULTS;

14
nc_test4/tst_files6.c
View File

@ -8,26 +8,12 @@
#include <nc_tests.h>
#include "netcdf.h"
#define URL "http://motherlode.ucar.edu:8081/dts/test.01"
#define FILE_NAME "tst_files6.nc"
int
main(int argc, char **argv)
{
printf("\n*** Testing netcdf file functions some more.\n");
#ifdef USE_DAP
#ifdef ENABLE_DAP_REMOTE_TESTS
printf("*** testing simple opendap open/close...");
{
int ncid;
/* Test with URL. */
if (nc_open(URL, 0, &ncid)) ERR;
if (nc_close(ncid)) ERR;
}
SUMMARIZE_ERR;
#endif /*ENABLE_DAP_REMOTE_TESTS*/
#endif /* USE_DAP */
printf("*** testing Jeff Whitaker's test...");
{
#define DIM_NAME "xc"

7
ncdap_test/Makefile.am
View File

@ -14,12 +14,17 @@ check_PROGRAMS =
TESTS =
TESTS_ENVIRONMENT=TOPSRCDIR=${abs_top_srcdir}
# Make nctestserver be the first test to be built
check_PROGRAMS += nctestserver
nctestserver_SOURCES = nctestserver.c
TESTS += tst_ncdap3.sh
# remote tests are optional
# because the server may be down or inaccessible
if ENABLE_DAP_REMOTE_TESTS
TESTS += tst_remote3.sh
if ENABLE_DAP_LONG_TESTS
@ -97,5 +102,3 @@ BUILT_SOURCES = .dodsrc
echo "#DODSRC" >.dodsrc
DISTCLEANFILES = .dodsrc results/* results

25
ncdap_test/nctestserver.c Normal file
View File

@ -0,0 +1,25 @@
#include <config.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include "netcdf.h"
#include "ncdispatch.h"
int
main(int argc, char** argv)
{
const char* url = NULL;
if(argc == 1) {
fprintf(stderr,"no path specified");
printf("%s","");
exit(1);
}
url = NC_findtestserver(argv[1]);
if(url == NULL)
url = "";
printf("%s",url);
fflush(stdout);
exit(0);
}

13
ncdap_test/test_partvar.c
View File

@ -6,6 +6,7 @@ Test part variable fetch code
#include <stdio.h>
#include <string.h>
#include <netcdf.h>
#include <ncdispatch.h>
/* The DDS in netcdf classic form is as follows:
netcdf ingrid {
@ -20,7 +21,7 @@ variables:
*/
#define PARAMS ""
#define URL "http://motherlode.ucar.edu:8081/dts/ingrid"
#define DTSTEST "/dts/ingrid"
#define VAR "v3H"
#define ISTA 35
#define IZ 44
@ -93,9 +94,17 @@ main()
size_t count[RANK];
size_t offset;
char url[4096];
const char* svc = NULL;
/* Find Test Server */
svc = NC_findtestserver("dts");
if(svc == NULL) {
fprintf(stderr,"Cannot locate test server\n");
exit(1);
}
strcpy(url,PARAMS);
strcat(url,URL);
strcat(url,svc);
strcat(url,DTSTEST);
printf("test_partvar: url=%s\n",url);

14
ncdap_test/test_partvar2.c
View File

@ -6,6 +6,7 @@ Test part variable fetch code
#include <stdio.h>
#include <string.h>
#include <netcdf.h>
#include <ncdispatch.h>
/* The DDS in netcdf classic form is as follows:
netcdf test {
@ -25,8 +26,9 @@ variables:
double PolarGrid.Data\\ Fields.Spectra(Bands\:PolarGrid, YDim\:PolarGrid, XDim\:PolarGrid) ;
*/
#define DTSTEST "/dts/test.GridFile"
#define PARAMS ""
#define URL "http://motherlode.ucar.edu:8081/dts/test.GridFile"
#define VAR "UTMGrid.Data Fields.Vegetation"
#define YDim_UTMGrid 200
#define XDim_UTMGrid 120
@ -82,10 +84,18 @@ main()
size_t start[RANK];
size_t count[RANK];
size_t offset;
const char* svc = NULL;
char url[4096];
/* Find Test Server */
svc = NC_findtestserver("dts");
if(svc == NULL) {
fprintf(stderr,"Cannot locate test server\n");
exit(1);
}
strcpy(url,PARAMS);
strcat(url,URL);
strcat(url,svc);
strcat(url,DTSTEST);
printf("test_partvar: url=%s\n",url);

11
ncdap_test/tst_ncdap3.sh
View File

@ -8,18 +8,21 @@
# than the one containing it; so capture the path to this script
# as the location of the source directory.
srcdir=`dirname $0`
cd $srcdir
srcdir=`pwd`
# compute the build directory
# Do a hack to remove e.g. c: for CYGWIN
cd `pwd`
builddir=`pwd`/..
# Hack for CYGWIN
# Hack for CYGWIN
cd $srcdir
srcdir=`pwd`
if [ `uname | cut -d "_" -f 1` == "MINGW32" ]; then
srcdir=`pwd | sed 's/\/c\//c:\//g'`
builddir="$srcdir"/..
builddir=`echo $builddir | sed 's/\/c\//c:\//g'`
fi
cd ${builddir}/ncdap_test

27
ncdap_test/tst_remote.sh
View File

@ -5,8 +5,13 @@ quiet=0
leakcheck=0
timing=0
# So we can switch more easily
PORT=8081
# Figure our dst server
SVC=`./nctestserver dts`
if test "x$SVC" = "x" ; then
echo "cannot locate test server"
exit
fi
DTS="$SVC/dts"
PARAMS="[log]"
#PARAMS="${PARAMS}[show=fetch]"
@ -62,14 +67,14 @@ PARAMS="${PARAMS}${CACHE}"
##################################################
# For special testing
REMOTEURLX="http://motherlode.ucar.edu:$PORT/dts"
REMOTEURLX="$DTS"
REMOTETESTSX="test.03"
REMOTEURLXC="http://motherlode.ucar.edu:$PORT/dts"
REMOTEURLXC="$DTS"
REMOTETESTSXC="test.03;1;s0,s1"
# These shorter tests are always run
REMOTEURLS1="http://motherlode.ucar.edu:$PORT/dts"
REMOTEURLS1="$DTS"
REMOTETESTSS1="\
test.01 test.02 test.04 test.05 test.06 test.07a test.07 \
test.21 \
@ -102,7 +107,7 @@ TOOBIGL1="parserBug0001 test.satimage Sat_Images test.32"
ESCAPEDFAIL="test.dfr1 test.dfr2 test.dfr3 test.GridFile test.PointFile test.SwathFile test.sds6 test.sds7"
# Following tests are to check constraint handling
REMOTEURLC1="http://motherlode.ucar.edu:$PORT/dts"
REMOTEURLC1="$DTS"
REMOTETESTSC1="\
test.01;1;f64 \
test.02;1;b[1:2:10] \
@ -131,13 +136,12 @@ argo_all.cdp;1;&location.LATITUDE<1&location.LATITUDE>-1\
# Test string access
# this test cannot be used because the
# dataset has a limited lifetime
REMOTEURLC4="http://motherlode.ucar.edu:$PORT/thredds/dodsC/station/metar"
REMOTETESTSC4="\
Surface_METAR_20120101_0000.nc;1;weather[0:10]\
"
#REMOTEURLC4="http://motherlode.ucar.edu:$PORT/thredds/dodsC/station/metar"
#REMOTETESTSC4="\
#Surface_METAR_20120101_0000.nc;1;weather[0:10]"
# Constrained long tests
REMOTEURLLC1="http://motherlode.ucar.edu:$PORT/dts"
REMOTEURLLC1="$DTS"
REMOTETESTSLC1="\
test.03;2;s1"
@ -238,7 +242,6 @@ for i in $WHICHTESTS ; do
C1) TESTURL="$REMOTEURLC1" ; TESTSET="$REMOTETESTSC1" ; constrained=1 ;;
C2) TESTURL="$REMOTEURLC2" ; TESTSET="$REMOTETESTSC2" ; constrained=1 ;ncconstrained=0 ;;
C3) TESTURL="$REMOTEURLC3" ; TESTSET="$REMOTETESTSC3" ; constrained=1 ;ncconstrained=0 ;;
C4) TESTURL="$REMOTEURLC4" ; TESTSET="$REMOTETESTSC4" ; constrained=1 ;ncconstrained=0 ;;
LC1) TESTURL="$REMOTEURLLC1" ; TESTSET="$REMOTETESTSLC1" ; constrained=1 ;;
X) TESTURL="$REMOTEURLX" ; TESTSET="$REMOTETESTSX" ; constrained=0 ;;
XC) TESTURL="$REMOTEURLXC" ; TESTSET="$REMOTETESTSXC" ; constrained=1 ;;

5
ncdap_test/tst_remote3.sh
View File

@ -5,12 +5,13 @@
# than the one containing it; so capture the path to this script
# as the location of the source directory.
srcdir=`dirname $0`
cd $srcdir
srcdir=`pwd`
# compute the build directory
builddir=`pwd`/..
# Hack for CYGWIN
cd $srcdir
srcdir=`pwd`
if [ `uname | cut -d "_" -f 1` == "MINGW32" ]; then
srcdir=`pwd | sed 's/\/c\//c:\//g'`
builddir="$srcdir"/..

4
ncdump/Makefile.am
View File

@ -69,10 +69,10 @@ ctest64.c:
$(top_builddir)/ncgen/ncgen -v2 -lc -o ctest0_64.nc $(top_srcdir)/ncgen/c0.cdl > $(srcdir)/ctest64.c
else
ctest.c:
cp ref_ctest.c ctest.c
cp $(top_srcdir)/ncdump/ref_ctest.c $(top_srcdir)/ncdump/ctest.c
ctest64.c:
cp ref_ctest64.c ctest64.c
cp $(top_srcdir)/ncdump/ref_ctest64.c $(top_srcdir)/ncdump/ctest64.c
endif
#if !BUILD_DLL

82
ncdump/tst_netcdf4_4.sh
View File

@ -5,30 +5,84 @@
set -e
if test "x$srcdir" = "x"; then
srcdir=`dirname $0`;
export srcdir=$srcdir
cd $srcdir
#srcdir=`pwd`
#export srcdir=$srcdir
fi
echo ""
echo "*** Running extra netcdf-4 tests."
echo "*** dumping tst_string_data.nc to tst_string_data.cdl..."
./ncdump tst_string_data.nc > tst_string_data.cdl
echo "*** comparing tst_string_data.cdl with ref_tst_string_data.cdl..."
diff -b tst_string_data.cdl $srcdir/ref_tst_string_data.cdl
#
# In windows, these tests fail because srcdir is prepended.
# e.g., Instead of 'ncdump ref_tst_compounds2' the file would
# contain:
# 'ncdump ./ref_tst_compounds2'. This causes the test to fail.
# But, 'srcdir' is necessary for make distcheck.
#
# Short term solution, use sed when on windows/MSYS to
# remove the './','../../ncdump'.
#
if [ `uname | cut -d "_" -f 1` == "MINGW32" ]; then # MINGW Platforms
echo "*** dumping tst_string_data.nc to tst_string_data.cdl..."
./ncdump tst_string_data.nc > tst_string_data.cdl
TMPNAME=`head -n 1 tst_string_data.cdl | cut -d" " -f 2`
NEWNAME=`basename $TMPNAME`
sed "s,$TMPNAME,$NEWNAME,g" tst_string_data.cdl > tmp.cdl
mv tmp.cdl tst_string_data.cdl
echo "*** comparing tst_string_data.cdl with ref_tst_string_data.cdl..."
diff -b tst_string_data.cdl $srcdir/ref_tst_string_data.cdl
echo '*** testing reference file ref_tst_compounds2.nc...'
./ncdump $srcdir/ref_tst_compounds2.nc > tst_compounds2.cdl
TMPNAME=`head -n 1 tst_compounds2.cdl | cut -d" " -f 2`
NEWNAME=`basename $TMPNAME`
sed "s,$TMPNAME,$NEWNAME,g" tst_compounds2.cdl > tmp.cdl
mv tmp.cdl tst_compounds2.cdl
diff -b tst_compounds2.cdl $srcdir/ref_tst_compounds2.cdl
echo '*** testing reference file ref_tst_compounds3.nc...'
./ncdump $srcdir/ref_tst_compounds3.nc > tst_compounds3.cdl
TMPNAME=`head -n 1 tst_compounds3.cdl | cut -d" " -f 2`
NEWNAME=`basename $TMPNAME`
sed "s,$TMPNAME,$NEWNAME,g" tst_compounds3.cdl > tmp.cdl
mv tmp.cdl tst_compounds3.cdl
diff -b tst_compounds3.cdl $srcdir/ref_tst_compounds3.cdl
echo '*** testing reference file ref_tst_compounds4.nc...'
./ncdump $srcdir/ref_tst_compounds4.nc > tst_compounds4.cdl
TMPNAME=`head -n 1 tst_compounds4.cdl | cut -d" " -f 2`
NEWNAME=`basename $TMPNAME`
sed "s,$TMPNAME,$NEWNAME,g" tst_compounds4.cdl > tmp.cdl
mv tmp.cdl tst_compounds4.cdl
diff -b tst_compounds4.cdl $srcdir/ref_tst_compounds4.cdl
else # Non-MINGW Platforms
echo "*** dumping tst_string_data.nc to tst_string_data.cdl..."
./ncdump tst_string_data.nc > tst_string_data.cdl
echo "*** comparing tst_string_data.cdl with ref_tst_string_data.cdl..."
diff -b tst_string_data.cdl $srcdir/ref_tst_string_data.cdl
#echo '*** testing non-coordinate variable of same name as dimension...'
#../ncgen/ncgen -v4 -b -o tst_noncoord.nc $srcdir/ref_tst_noncoord.cdl
echo '*** testing reference file ref_tst_compounds2.nc...'
./ncdump ref_tst_compounds2.nc > tst_compounds2.cdl
diff -b tst_compounds2.cdl $srcdir/ref_tst_compounds2.cdl
echo '*** testing reference file ref_tst_compounds2.nc...'
./ncdump $srcdir/ref_tst_compounds2.nc > tst_compounds2.cdl
diff -b tst_compounds2.cdl $srcdir/ref_tst_compounds2.cdl
echo '*** testing reference file ref_tst_compounds3.nc...'
./ncdump ref_tst_compounds3.nc > tst_compounds3.cdl
diff -b tst_compounds3.cdl $srcdir/ref_tst_compounds3.cdl
echo '*** testing reference file ref_tst_compounds3.nc...'
./ncdump $srcdir/ref_tst_compounds3.nc > tst_compounds3.cdl
diff -b tst_compounds3.cdl $srcdir/ref_tst_compounds3.cdl
echo '*** testing reference file ref_tst_compounds4.nc...'
./ncdump ref_tst_compounds4.nc > tst_compounds4.cdl
diff -b tst_compounds4.cdl $srcdir/ref_tst_compounds4.cdl
echo '*** testing reference file ref_tst_compounds4.nc...'
./ncdump $srcdir/ref_tst_compounds4.nc > tst_compounds4.cdl
diff -b tst_compounds4.cdl $srcdir/ref_tst_compounds4.cdl
fi
echo "*** All ncgen and ncdump extra test output for netCDF-4 format passed!"
exit 0

8
oc/daplex.c
View File

@ -17,14 +17,16 @@ static int tohex(int c);
/****************************************************/
#if 0 /* Following definitions are for informational purposes */
/* Set of all ascii printable characters */
static char ascii[] = " !\"#$%&'()*+,-./:;<=>?@[]\\^_`|{}~";
static char* ddsworddelims =
"{}[]:;=,";
/* Define the set of legal nonalphanum characters as specified in the DAP2 spec. */
static char* daplegal ="_!~*'-\"";
#endif
static char* ddsworddelims =
"{}[]:;=,";
/* Define 1 and > 1st legal characters */
static char* ddswordchars1 =

12
oc/oc.c
View File

@ -13,6 +13,7 @@
#include "ocdump.h"
#include "oclog.h"
#include "occlientparams.h"
#include "ochttp.h"
#undef TRACK
@ -704,7 +705,7 @@ size_t oc_typesize(OCtype etype)
return octypesize(etype);
}
char*
const char*
oc_typetostring(OCtype octype)
{
return octypetoddsstring(octype);
@ -722,7 +723,7 @@ oc_typeprint(OCtype etype, char* buf, size_t bufsize, void* value)
/**************************************************/
/* Miscellaneous */
char*
const char*
oc_errstring(int err)
{
return ocerrstring(err);
@ -947,3 +948,10 @@ oc_dumpnode(OCconnection conn, OCobject root0)
ocdumpnode(root);
return ocerr;
}
OCerror
oc_ping(const char* url)
{
return ocping(url);
}

16
oc/oc.h
View File

@ -100,11 +100,11 @@ typedef int OCflags;
#define OCONDISK 1
typedef enum OCmode {
OCFIELDMODE = OC_Structure,
OCSEQUENCEMODE = OC_Sequence,
OCARRAYMODE = OC_Dimension,
OCPRIMITIVEMODE = OC_Primitive,
OCNULLMODE = OC_NAT,
OCNULLMODE = 0,
OCFIELDMODE = 1,
OCSEQUENCEMODE = 2,
OCARRAYMODE = 3,
OCPRIMITIVEMODE = 4,
OCEMPTYMODE = 0x8000000 /* internal use only */
} OCmode;
@ -364,7 +364,7 @@ extern size_t oc_typesize(OCtype);
/* Return a canonical printable string describing a given type:
e.g. Byte, Int16, etc.
*/
extern char* oc_typetostring(OCtype);
extern const char* oc_typetostring(OCtype);
/* Given a value of a primitive OC type, provide a canonical
string representing that value
@ -387,7 +387,7 @@ extern void oc_log(int tag, const char* fmt, ...);
/* Miscellaneous */
/* Convert an OCerror to a human readable string */
extern char* oc_errstring(int err);
extern const char* oc_errstring(int err);
/* Get client parameters from the URL
DO NOT free the result
@ -430,6 +430,8 @@ extern OCerror oc_update_lastmodified_data(OClink);
/* Get last known modification time; -1 => data unknown */
extern long oc_get_lastmodified_data(OClink);
extern OCerror oc_ping(const char* url);
/**************************************************/
#endif /*OCINTERNAL_H*/

56
oc/ochttp.c
View File

@ -32,7 +32,7 @@ ocfetchhttpcode(CURL* curl)
}
int
ocfetchurl_file(CURL* curl, char* url, FILE* stream,
ocfetchurl_file(CURL* curl, const char* url, FILE* stream,
unsigned long* sizep, long* filetime)
{
int stat = OC_NOERR;
@ -85,7 +85,7 @@ fail:
}
int
ocfetchurl(CURL* curl, char* url, OCbytes* buf, long* filetime)
ocfetchurl(CURL* curl, const char* url, OCbytes* buf, long* filetime)
{
int stat = OC_NOERR;
CURLcode cstat = CURLE_OK;
@ -107,7 +107,7 @@ ocfetchurl(CURL* curl, char* url, OCbytes* buf, long* filetime)
goto fail;
/* One last thing; always try to get the last modified time */
cstat = curl_easy_setopt(curl, CURLOPT_FILETIME, (long)1);
cstat = curl_easy_setopt(curl, CURLOPT_FILETIME, (long)1);
cstat = curl_easy_perform(curl);
if(cstat == CURLE_PARTIAL_FILE) {
@ -286,3 +286,53 @@ fail:
oc_log(LOGERR, "curl error: %s", curl_easy_strerror(cstat));
return OCTHROW(OC_ECURL);
}
int
ocping(const char* url)
{
int stat = OC_NOERR;
CURLcode cstat = CURLE_OK;
CURL* curl = NULL;
OCbytes* buf = NULL;
/* Create a CURL instance */
stat = occurlopen(&curl);
if(stat != OC_NOERR) return stat;
/* use a very short timeout: 10 seconds */
cstat = curl_easy_setopt(curl, CURLOPT_TIMEOUT, (long)10);
if (cstat != CURLE_OK)
goto done;
/* fail on HTTP 400 code errors */
cstat = curl_easy_setopt(curl, CURLOPT_FAILONERROR, (long)1);
if (cstat != CURLE_OK)
goto done;
/* Try to get the file */
buf = ocbytesnew();
stat = ocfetchurl(curl,url,buf,NULL);
if(stat == OC_NOERR) {
/* Don't trust curl to return an error when request gets 404 */
long http_code = 0;
cstat = curl_easy_getinfo(curl,CURLINFO_RESPONSE_CODE, &http_code);
if (cstat != CURLE_OK)
goto done;
if(http_code >= 400) {
cstat = CURLE_HTTP_RETURNED_ERROR;
goto done;
}
} else
goto done;
done:
ocbytesfree(buf);
occurlclose(curl);
if(cstat != CURLE_OK) {
oc_log(LOGERR, "curl error: %s", curl_easy_strerror(cstat));
stat = OC_EDAPSVC;
}
return OCTHROW(stat);
}

6
oc/ochttp.h
View File

@ -7,8 +7,8 @@
extern int curlopen(CURL** curlp);
extern void curlclose(CURL*);
extern int ocfetchurl(CURL*, char*, OCbytes*, long*);
extern int ocfetchurl_file(CURL*, char*, FILE*, unsigned long*, long*);
extern int ocfetchurl(CURL*, const char*, OCbytes*, long*);
extern int ocfetchurl_file(CURL*, const char*, FILE*, unsigned long*, long*);
extern long ocfetchhttpcode(CURL* curl);
@ -17,4 +17,6 @@ extern int ocfetchlastmodified(CURL* curl, char* url, long* filetime);
extern int occurlopen(CURL** curlp);
extern void occurlclose(CURL* curlp);
extern int ocping(const char* url);
#endif /*HTTP_H*/

7
oc/ocinternal.c
View File

@ -22,10 +22,10 @@
#include "ocread.h"
/* Note: TMPPATH must end in '/' */
#ifdef __WIN32__
#ifdef __CYGWIN__
#define TMPPATH1 "/cygdrive/c/temp/"
#define TMPPATH2 "c:/"
#elif defined(WIN32)
#define TMPPATH2 "./"
#elifdef WIN32
#define TMPPATH1 "c:\\temp/"
#define TMPPATH2 ".\\"
#else
@ -483,7 +483,6 @@ createtempfile1(char* tmppath, char** tmpnamep)
strcat(tmpname,spid);
# ifdef WIN32
fd=open(tmpname,O_RDWR|O_BINARY|O_CREAT|O_EXCL|FILE_ATTRIBUTE_TEMPORARY, _S_IREAD|_S_IWRITE);
//fd=open(tmpname,O_RDWR|O_BINARY|O_CREAT|O_EXCL|_O_SHORT_LIVED, _S_IREAD|_S_IWRITE);
# else
fd=open(tmpname,O_RDWR|O_CREAT|O_EXCL, S_IRWXU);
# endif

4
oc/ocnode.h
View File

@ -69,10 +69,6 @@ typedef struct OCnode {
ocoffset_t offset; /* position of the last indexed instance */
} cache;
#endif
#ifdef OC_DAP4
OCtypeinfo typdef;
OCgroupinfo group;
#endif
} OCnode;
#if SIZEOF_SIZE_T == 4

512
win32_config.h
View File

@ -1,512 +0,0 @@
/* config.h. Generated from config.h.in by configure. */
/* config.h.in. Generated from configure.ac by autoheader. */
/* Define if building universal (internal helper macro) */
/* #undef AC_APPLE_UNIVERSAL_BUILD */
/* default file chunk cache nelems. */
#define CHUNK_CACHE_NELEMS 1009
/* default file chunk cache preemption policy. */
#define CHUNK_CACHE_PREEMPTION 0.75
/* default file chunk cache size in bytes. */
#define CHUNK_CACHE_SIZE 4194304
/* Define to one of `_getb67', `GETB67', `getb67' for Cray-2 and Cray-YMP
systems. This function is required for `alloca.c' support on those systems.
*/
/* #undef CRAY_STACKSEG_END */
/* Define to 1 if using `alloca.c'. */
/* #undef C_ALLOCA */
/* num chunks in default per-var chunk cache. */
#define DEFAULT_CHUNKS_IN_CACHE 10
/* default chunk size in bytes */
#define DEFAULT_CHUNK_SIZE 4194304
/* set this only when building a DLL under MinGW */
/* #undef DLL_NETCDF */
/* if true, build DAP Client */
/*#define ENABLE_DAP 1 */
/* if true, do remote tests */
#define ENABLE_DAP_REMOTE_TESTS 1
/* if true, run extra tests which may not work yet */
/* #undef EXTRA_TESTS */
/* use HDF5 1.6 API */
/* #undef H5_USE_16_API */
/* Define to 1 if you have `alloca', as a function or macro. */
#if !defined(_WIN32)
#define HAVE_ALLOCA 1
#endif
/* Define to 1 if you have <alloca.h> and it should be used (not on Ultrix).
*/
#define HAVE_ALLOCA_H 1
/* Define to 1 if you have the <ctype.h> header file. */
#define HAVE_CTYPE_H 1
/* Is CURLOPT_KEYPASSWD defined */
#define HAVE_CURLOPT_KEYPASSWD 1
/* Define to 1 if you have the declaration of `isfinite', and to 0 if you
don't. */
#define HAVE_DECL_ISFINITE 0
/* Define to 1 if you have the declaration of `isinf', and to 0 if you don't.
*/
#define HAVE_DECL_ISINF 1
/* Define to 1 if you have the declaration of `isnan', and to 0 if you don't.
*/
#define HAVE_DECL_ISNAN 1
/* Define to 1 if you have the declaration of `signbit', and to 0 if you
don't. */
#define HAVE_DECL_SIGNBIT 0
/* Define to 1 if you have the <dirent.h> header file, and it defines `DIR'.
*/
#define HAVE_DIRENT_H 1
/* Define to 1 if you have the <dlfcn.h> header file. */
#define HAVE_DLFCN_H 1
/* Define to 1 if you don't have `vprintf' but do have `_doprnt.' */
/* #undef HAVE_DOPRNT */
/* Define to 1 if you have the <errno.h> header file. */
#define HAVE_ERRNO_H 1
/* Define to 1 if you have the <fcntl.h> header file. */
#define HAVE_FCNTL_H 1
/* Define to 1 if you have the `fsync' function. */
#define HAVE_FSYNC 1
/* Define to 1 if you have the <getopt.h> header file. */
#define HAVE_GETOPT_H 1
/* Define to 1 if you have the `getrlimit' function. */
#define HAVE_GETRLIMIT 1
/* Define to 1 if you have the `gettimeofday' function. */
#define HAVE_GETTIMEOFDAY 1
/* Define to 1 if you have the `H5Pget_fapl_mpio' function. */
/* #undef HAVE_H5PGET_FAPL_MPIO */
/* Define to 1 if you have the `H5Pget_fapl_mpiposix' function. */
/* #undef HAVE_H5PGET_FAPL_MPIPOSIX */
/* Define to 1 if you have the `H5Pset_deflate' function. */
/* #undef HAVE_H5PSET_DEFLATE */
/* Define to 1 if you have the `H5Z_SZIP' function. */
/* #undef HAVE_H5Z_SZIP */
/* Define to 1 if you have the <hdf5.h> header file. */
/* #undef HAVE_HDF5_H */
/* Define to 1 if you have the <inttypes.h> header file. */
#if !defined(vxWorks) && !defined(_WIN32)
#define HAVE_INTTYPES_H 1
#endif
/* Define to 1 if you have the `curl' library (-lcurl). */
#define HAVE_LIBCURL 1
/* Define to 1 if you have the `df' library (-ldf). */
/* #undef HAVE_LIBDF */
/* Define to 1 if you have the `m' library (-lm). */
#define HAVE_LIBM 1
/* Define to 1 if you have the `mfhdf' library (-lmfhdf). */
/* #undef HAVE_LIBMFHDF */
/* Define to 1 if you have the `pnetcdf' library (-lpnetcdf). */
/* #undef HAVE_LIBPNETCDF */
/* Define to 1 if you have the <locale.h> header file. */
#define HAVE_LOCALE_H 1
/* Define to 1 if the system has the type `longlong'. */
/* #undef HAVE_LONGLONG */
/* Define to 1 if the system has the type `long long int'. */
/* #undef HAVE_LONG_LONG_INT */
/* Define to 1 if you have the <malloc.h> header file. */
#define HAVE_MALLOC_H 1
/* Define to 1 if you have the <memory.h> header file. */
#define HAVE_MEMORY_H 1
/* Define to 1 if you have the <mfhdf.h> header file. */
/* #undef HAVE_MFHDF_H */
/* Define to 1 if you have the `mktemp' function. */
#define HAVE_MKTEMP 1
/* Define to 1 if you have the `MPI_Comm_f2c' function. */
/* #undef HAVE_MPI_COMM_F2C */
/* Define to 1 if you have the <ndir.h> header file, and it defines `DIR'. */
/* #undef HAVE_NDIR_H */
/* Define to 1 if the system has the type `ptrdiff_t'. */
#define HAVE_PTRDIFF_T 1
/* no rpc/types.h */
#define HAVE_RPC_TYPES_H /**/
/* no rpc/xdr.h */
#define HAVE_RPC_XDR_H /**/
/* Define to 1 if you have the `snprintf' function. */
#define HAVE_SNPRINTF 1
/* Define to 1 if the system has the type `ssize_t'. */
#if !defined(_WIN32)
#define HAVE_SSIZE_T 1
#endif
/* Define to 1 if you have the <stdarg.h> header file. */
#define HAVE_STDARG_H 1
/* Define to 1 if stdbool.h conforms to C99. */
#if !defined(vxWorks) && !defined(_WIN32)
#define HAVE_STDBOOL_H 1
#endif
/* Define to 1 if you have the <stdint.h> header file. */
#if !defined(vxWorks) && !defined(_WIN32)
#define HAVE_STDINT_H 1
#endif
/* Define to 1 if you have the <sys/param.h> header file. */
#if !defined(vxWorks) && !defined(_WIN32)
#define HAVE_SYS_PARAM_H 1
#endif
/* Define to 1 if you have the <stdio.h> header file. */
#define HAVE_STDIO_H 1
/* Define to 1 if you have the <stdlib.h> header file. */
#define HAVE_STDLIB_H 1
/* Define to 1 if you have the `strcasecmp' function. */
#define HAVE_STRCASECMP 1
/* Define to 1 if you have the `strcat' function. */
#define HAVE_STRCAT 1
/* Define to 1 if you have the `strchr' function. */
#define HAVE_STRCHR 1
/* Define to 1 if you have the `strcpy' function. */
#define HAVE_STRCPY 1
/* Define to 1 if you have the `strdup' function. */
#if !defined(vxWorks)
#define HAVE_STRDUP 1
#endif
/* Define to 1 if you have the `strerror' function. */
#define HAVE_STRERROR 1
/* Define to 1 if you have the <strings.h> header file. */
#define HAVE_STRINGS_H 1
/* Define to 1 if you have the <string.h> header file. */
#define HAVE_STRING_H 1
/* Define to 1 if you have the `strlcat' function. */
/* #undef HAVE_STRLCAT */
/* Define to 1 if you have the `strrchr' function. */
#define HAVE_STRRCHR 1
/* Define to 1 if you have the `strtod' function. */
#define HAVE_STRTOD 1
/* Define to 1 if you have the `strtoll' function. */
#define HAVE_STRTOLL 1
/* Define to 1 if you have the `strtoull' function. */
#define HAVE_STRTOULL 1
/* Define to 1 if `st_blksize' is a member of `struct stat'. */
#define HAVE_STRUCT_STAT_ST_BLKSIZE 1
/* Define to 1 if your `struct stat' has `st_blksize'. Deprecated, use
`HAVE_STRUCT_STAT_ST_BLKSIZE' instead. */
#if !defined(_WIN32)
#define HAVE_ST_BLKSIZE 1
#endif
/* Define to 1 if you have the <sys/dir.h> header file, and it defines `DIR'.
*/
/* #undef HAVE_SYS_DIR_H */
/* Define to 1 if you have the <sys/ndir.h> header file, and it defines `DIR'.
*/
/* #undef HAVE_SYS_NDIR_H */
/* Define to 1 if you have the <sys/resource.h> header file. */
#define HAVE_SYS_RESOURCE_H 1
/* Define to 1 if you have the <sys/stat.h> header file. */
#define HAVE_SYS_STAT_H 1
/* Define to 1 if you have the <sys/time.h> header file. */
#define HAVE_SYS_TIME_H 1
/* Define to 1 if you have the <sys/types.h> header file. */
#define HAVE_SYS_TYPES_H 1
/* Define to 1 if you have <sys/wait.h> that is POSIX.1 compatible. */
#define HAVE_SYS_WAIT_H 1
/* Define to 1 if the system has the type `uchar'. */
/* #undef HAVE_UCHAR */
/* Define to 1 if you have the <unistd.h> header file. */
#if !defined(_WIN32)
#define HAVE_UNISTD_H 1
#endif
/* Define to 1 if the system has the type `unsigned long long int'. */
/* #undef HAVE_UNSIGNED_LONG_LONG_INT */
/* Define to 1 if you have the `vprintf' function. */
#define HAVE_VPRINTF 1
/* Define to 1 if the system has the type `_Bool'. */
#if !defined(vxWorks) && !defined(_WIN32)
#define HAVE__BOOL 1
#endif
/* do large file tests */
/* #undef LARGE_FILE_TESTS */
/* If true, turn on logging. */
/* #undef LOGGING */
/* Define to the sub-directory in which libtool stores uninstalled libraries.
*/
#define LT_OBJDIR ".libs/"
/* max size of the default per-var chunk cache. */
#define MAX_DEFAULT_CACHE_SIZE 67108864
/* type definition */
#define NCBYTE_T byte
/* min blocksize for posixio. */
#define NCIO_MINBLOCKSIZE 256
/* type definition */
#define NCSHORT_T integer*2
/* default */
#define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
/* default */
#define NF_INT1_IS_C_SIGNED_CHAR 1
/* type thing */
#define NF_INT1_T byte
/* default */
#define NF_INT2_IS_C_SHORT 1
/* type thing */
#define NF_INT2_T integer*2
/* default */
#define NF_INT_IS_C_INT 1
/* default */
#define NF_REAL_IS_C_FLOAT 1
/* no IEEE float on this platform */
/* #undef NO_IEEE_FLOAT */
/* Define to 1 if your C compiler doesn't accept -c and -o together. */
/* #undef NO_MINUS_C_MINUS_O */
/* do not build the netCDF version 2 API */
/* #undef NO_NETCDF_2 */
/* no stdlib.h */
/* #undef NO_STDLIB_H */
/* no sys_types.h */
/* #undef NO_SYS_TYPES_H */
/* Name of package */
#define PACKAGE "netcdf"
/* Define to the address where bug reports for this package should be sent. */
#define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu"
/* Define to the full name of this package. */
#define PACKAGE_NAME "netCDF"
/* Define to the full name and version of this package. */
#define PACKAGE_STRING "netCDF 4.1.3"
/* Define to the one symbol short name of this package. */
#define PACKAGE_TARNAME "netcdf"
/* Define to the home page for this package. */
#define PACKAGE_URL ""
/* Define to the version of this package. */
#define PACKAGE_VERSION "4.1.3"
/* The size of `double', as computed by sizeof. */
#define SIZEOF_DOUBLE 8
/* The size of `float', as computed by sizeof. */
#define SIZEOF_FLOAT 4
/* The size of `int', as computed by sizeof. */
#define SIZEOF_INT 4
/* The size of `long', as computed by sizeof. */
#define SIZEOF_LONG 4
/* The size of `off_t', as computed by sizeof. */
#if defined(vxWorks)
#define SIZEOF_OFF_T 4
#elif defined(_WIN32)
#include <io.h>
#include <process.h>
#define SIZEOF_OFF_T 8
#define lseek _lseeki64
#define off_t __int64
#define _off_t __int64
#define _OFF_T_DEFINED
#else
#define SIZEOF_OFF_T 8
#endif
/* The size of `short', as computed by sizeof. */
#define SIZEOF_SHORT 2
/* The size of `size_t', as computed by sizeof. */
#define SIZEOF_SIZE_T 4
/* If using the C implementation of alloca, define if you know the
direction of stack growth for your system; otherwise it will be
automatically deduced at runtime.
STACK_DIRECTION > 0 => grows toward higher addresses
STACK_DIRECTION < 0 => grows toward lower addresses
STACK_DIRECTION = 0 => direction of growth unknown */
/* #undef STACK_DIRECTION */
/* Define to 1 if you have the ANSI C header files. */
#define STDC_HEADERS 1
/* Place to put very large netCDF test files. */
#define TEMP_LARGE "."
/* Define to 1 if you can safely include both <sys/time.h> and <time.h>. */
#define TIME_WITH_SYS_TIME 1
/* if true, build CDMREMOTE Client */
/* #undef USE_CDMREMOTE */
/* if true, build DAP Client */
/*#define USE_DAP 1 */
/* set this to use extreme numbers in tests */
#define USE_EXTREME_NUMBERS 1
/* if true, include experimental fsync code */
#if !defined(vxWorks) && !defined(_WIN32)
#define USE_FSYNC 1
#endif
/* if true, use HDF4 too */
/* #undef USE_HDF4 */
/* If true, use use wget to fetch some sample HDF4 data, and then test against
it. */
/* #undef USE_HDF4_FILE_TESTS */
/* if true, build netCDF-4 */
/* #undef USE_NETCDF4 */
/* if true, parallel netCDF-4 is in use */
/* #undef USE_PARALLEL */
/* if true, compile in parallel netCDF-4 based on MPI/IO */
/* #undef USE_PARALLEL_MPIO */
/* if true, compile in parallel netCDF-4 based on MPI/POSIX */
/* #undef USE_PARALLEL_POSIX */
/* if true, parallel netCDF is used */
/* #undef USE_PNETCDF */
/* if true, compile in szip compression in netCDF-4 variables */
/* #undef USE_SZIP */
/* if true, compile in zlib compression in netCDF-4 variables */
/* #undef USE_ZLIB */
/* Version number of package */
#define VERSION "4.1.3"
/* Define WORDS_BIGENDIAN to 1 if your processor stores words with the most
significant byte first (like Motorola and SPARC, unlike Intel). */
#if defined AC_APPLE_UNIVERSAL_BUILD
# if defined __BIG_ENDIAN__
# define WORDS_BIGENDIAN 1
# endif
#else
# ifndef WORDS_BIGENDIAN
/* # undef WORDS_BIGENDIAN */
# endif
#endif
/* Number of bits in a file offset, on hosts where this is settable. */
#define _FILE_OFFSET_BITS 64
/* Define for large files, on AIX-style hosts. */
/* #undef _LARGE_FILES */
/* Define to 1 if type `char' is unsigned and you are not using gcc. */
#ifndef __CHAR_UNSIGNED__
/* # undef __CHAR_UNSIGNED__ */
#endif
/* Define to empty if `const' does not conform to ANSI C. */
/* #undef const */
/* Turned on by netCDF configure. */
/* #undef f2cFortran */
/* Turned on by netCDF configure. */
/* #undef gFortran */
/* Define to `long int' if <sys/types.h> does not define. */
/* #undef off_t */
/* Turned on by netCDF configure. */
#define pgiFortran 1
/* Define to `unsigned int' if <sys/types.h> does not define. */
/* #undef size_t */