Merged latest from netcdf-cmake branch.

Addressed several cmake-related issues, in terms of
building on Windows.  Also added XGetopt.c to 
EXTRA_dist in Makefile.am files.

CMakeLists.txt

@@ -19,6 +19,7 @@ ENDIF()
 
 # Get system configuration
 find_program(UNAME NAMES uname)
+IF(UNAME)
 macro(getuname name flag)
         exec_program("${UNAME}" ARGS "${flag}" OUTPUT_VARIABLE "${name}")
 endmacro(getuname)
@@ -26,7 +27,7 @@ getuname(osname -s)
 getuname(osrel  -r)
 getuname(cpu    -m)
 set(BUILDNAME        "${osname}-${osrel}-${cpu}" CACHE STRING "Build name variable for CDash")
-
+ENDIF()
 ENABLE_TESTING()
 INCLUDE(CTest)
 

include/netcdf.h

@@ -14,6 +14,10 @@ for more info.
 #include <stddef.h> /* size_t, ptrdiff_t */
 #include <errno.h>  /* netcdf functions sometimes return system errors */
 
+/* Required for alloca on Windows */ 
+#if defined(_WIN32) || defined(_WIN64)
+#include <malloc.h>
+#endif
 
 #ifdef _WIN64
 #include <sys/stat.h>

libsrc/Makefile.am

@@ -39,7 +39,7 @@ noinst_LTLIBRARIES = libnetcdf3.la
 # with m4), but they are included in the distribution so that the user
 # does not have to have m4.
 MAINTAINERCLEANFILES = attr.c ncx.c putget.c $(man_MANS) attrx.c putgetx.c
-EXTRA_DIST = attr.m4 ncx.m4 putget.m4 $(man_MANS) CMakeLists.txt 
+EXTRA_DIST = attr.m4 ncx.m4 putget.m4 $(man_MANS) CMakeLists.txt XGetopt.c 
 
 # This tells make how to turn .m4 files into .c files.
 .m4.c:

libsrc/putget.c

@@ -23,6 +23,9 @@
 #endif
 #include "nc3dispatch.h"
 
+#if defined(_WIN32) || defined(_WIN64)
+#include <malloc.h>
+#endif
 
 #undef MIN  /* system may define MIN somewhere and complain */
 #define MIN(mm,nn) (((mm) < (nn)) ? (mm) : (nn))

ncdump/Makefile.am

@@ -123,7 +123,7 @@ ref_nc_test_netcdf4.cdl ref_tst_special_atts3.cdl tst_brecs.cdl         \
 ref_tst_grp_spec0.cdl ref_tst_grp_spec.cdl tst_grp_spec.sh              \
 ref_tst_charfill.cdl tst_charfill.cdl tst_charfill.sh                   \
 tst_iter.sh tst_mud.sh ref_tst_mud4.cdl                                 \
-ref_tst_ncf213.cdl CMakeLists.txt
+ref_tst_ncf213.cdl CMakeLists.txt XGetopt.c
 
 # NCGEN4 additions
 SUBDIRS=cdl4 expected4

ncgen/Makefile.am

@@ -22,7 +22,7 @@ man_MANS = ncgen.1
 # These files all need to be distributed.
 EXTRA_DIST = ncgen.y ncgenyy.c ncgen.l $(man_MANS) internals.html	\
 run_tests.sh run_nc4_tests.sh c0.cdl ref_camrun.cdl \
-ncf199.cdl CMakeLists.txt
+ncf199.cdl CMakeLists.txt XGetopt.c
 
 # This shell script causes ncgen to build a classic and a 64-bit
 # offset file from a cdl file shipped with the distribution.

ncgen3/Makefile.am

@@ -30,7 +30,7 @@ endif # USE_NETCDF4
 
 CLEANFILES = c0.nc c0_64.nc c0_4.nc c0_4c.nc
 
-EXTRA_DIST += CMakeLists.txt
+EXTRA_DIST += CMakeLists.txt XGetopt.c
 
 # This is used if someone wants to rebuild ncgenyy.c or ncgentab.c
 # Otherwise never invoked, but records how to do it. Don't forget to

oc2/ocinternal.h

@@ -6,6 +6,11 @@
 
 #include "config.h"
 
+
+#if defined(_WIN32) || defined(_WIN64)
+#include <malloc.h>
+#endif
+
 #ifdef _AIX
 #include <netinet/in.h>
 #endif