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Enable nczarr testing in github actions.

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Changes:
1. add "use_nczarr: [ nczarr_off, nczarr_on ]" to matrix
2. add libzip-dev to the apt installs (might need caching).
3. convert deprecated "--enable-netcdf-4" to "--enable-hdf5" (also for cmake)
This commit is contained in:
Dennis Heimbigner 2021-01-27 11:30:48 -07:00
parent 025fb7b6fe
commit 911d0a5deb
1 changed files with 17 additions and 7 deletions
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24
.github/workflows/run_tests.yml vendored
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@ -22,7 +22,7 @@ jobs:
- name: Install System dependencies
shell: bash -l {0}
run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake
run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev
###
# Installing libhdf4 and libhdf5
@ -65,13 +65,14 @@ jobs:
hdf5: [ 1.8.21, 1.10.7 ]
use_nc4: [ nc3, nc4 ]
use_dap: [ dap_off, dap_on ]
use_nczarr: [ nczarr_off, nczarr_on ]
steps:
- uses: actions/checkout@v2
- name: Install System dependencies
shell: bash -l {0}
run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake
run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev
###
# Set Environmental Variables
@ -82,16 +83,20 @@ jobs:
- run: echo "LD_LIBRARY_PATH=${HOME}/environments/${{ matrix.hdf5 }}/lib" >> $GITHUB_ENV
- run: |
echo "ENABLE_HDF4=--disable-hdf4" >> $GITHUB_ENV
echo "ENABLE_NC4=--disable-netcdf-4" >> $GITHUB_ENV
echo "ENABLE_NC4=--disable-hdf5" >> $GITHUB_ENV
if: matrix.use_nc4 == 'nc3'
- run: |
echo "ENABLE_HDF4=--enable-hdf4" >> $GITHUB_ENV
echo "ENABLE_NC4=--enable-netcdf-4" >> $GITHUB_ENV
echo "ENABLE_NC4=--enable-hdf5" >> $GITHUB_ENV
if: matrix.use_nc4 == 'nc4'
- run: echo "ENABLE_DAP=--disable-dap" >> $GITHUB_ENV
if: matrix.use_dap == 'dap_off'
- run: echo "ENABLE_DAP=--enable-dap" >> $GITHUB_ENV
if: matrix.use_dap == 'dap_on'
- run: echo "ENABLE_NCZARR=--disable-nczarr" >> $GITHUB_ENV
if: matrix.use_nczarr == 'nczarr_off'
- run: echo "ENABLE_NCZARR=--enable-nczarr" >> $GITHUB_ENV
if: matrix.use_nczarr == 'nczarr_on'
###
# Fetch Cache
@ -118,7 +123,7 @@ jobs:
- name: Configure
shell: bash -l {0}
run: CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} ./configure ${ENABLE_HDF4} ${ENABLE_NC4} ${ENABLE_DAP}
run: CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} ./configure ${ENABLE_HDF4} ${ENABLE_NC4} ${ENABLE_DAP} ${ENABLE_NCZARR}
- name: Look at config.log if error
shell: bash -l {0}
@ -158,13 +163,14 @@ jobs:
hdf5: [ 1.8.21, 1.10.7 ]
use_nc4: [ nc3, nc4 ]
use_dap: [ dap_off, dap_on ]
use_nczarr: [ nczarr_off, nczarr_on ]
steps:
- uses: actions/checkout@v2
- name: Install System dependencies
shell: bash -l {0}
run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake
run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev
###
# Set Environmental Variables
@ -184,6 +190,10 @@ jobs:
if: matrix.use_dap == 'dap_off'
- run: echo "ENABLE_DAP=ON" >> $GITHUB_ENV
if: matrix.use_dap == 'dap_on'
- run: echo "ENABLE_NCZARR=--disable-nczarr" >> $GITHUB_ENV
if: matrix.use_nczarr == 'nczarr_off'
- run: echo "ENABLE_NCZARR=--enable-nczarr" >> $GITHUB_ENV
if: matrix.use_nczarr == 'nczarr_on'
- run: echo "CTEST_OUTPUT_ON_FAILURE=1" >> $GITHUB_ENV
###
@ -210,7 +220,7 @@ jobs:
run: |
mkdir build
cd build
LD_LIBRARY_PATH=${LD_LIBRARY_PATH} cmake .. -DENABLE_HDF4=${ENABLE_HDF4} -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} -DENABLE_DAP=${ENABLE_DAP} -DENABLE_NETCDF_4=${ENABLE_NC4}
LD_LIBRARY_PATH=${LD_LIBRARY_PATH} cmake .. -DENABLE_HDF4=${ENABLE_HDF4} -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} -DENABLE_DAP=${ENABLE_DAP} -DENABLE_HDF5=${ENABLE_NC4} -DENABLE_NCZARR=${ENABLE_NCZARR}
- name: Print Summary
shell: bash -l {0}